Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02787 Eucalyptus grandis HOM05D008087 ORTHO05D010187 3.7e-89 331.6 183 100.0
Eucgr.C03187 Eucalyptus grandis HOM05D008087 ORTHO05D010187 7.2e-85 317.4 209 87.6
QL11p000704 Quercus lobata HOM05D008087 ORTHO05D010187 9.2e-64 247.3 208 65.4
Ciclev10009482m.g Citrus clementina HOM05D008087 ORTHO05D010187 1.7e-62 243.0 209 65.1
Thecc.09G077500 Theobroma cacao HOM05D008087 ORTHO05D010187 6.6e-62 241.1 209 66.0
Cfa002992 Carpinus fangiana HOM05D008087 ORTHO05D010187 3.3e-61 238.8 209 63.2
Hma1.2p1_0179F.1_g079550 Hydrangea macrophylla HOM05D008087 ORTHO05D010187 2.1e-60 236.1 209 63.6
TWI34G0776 Tripterygium wilfordii HOM05D008087 ORTHO05D010187 3.6e-60 235.3 209 62.2
MD15G1217200 Malus domestica HOM05D008087 ORTHO05D010187 6.2e-60 234.6 212 63.2
Manes.16G095600 Manihot esculenta HOM05D008087 ORTHO05D010187 1.4e-59 233.4 209 61.2
COL.COLO4_18101 Corchorus olitorius HOM05D008087 ORTHO05D010187 3.1e-59 232.3 209 63.6
Prupe.7G199300 Prunus persica HOM05D008087 ORTHO05D010187 4.0e-59 231.9 212 63.7
Gorai.010G088200 Gossypium raimondii HOM05D008087 ORTHO05D010187 8.9e-59 230.7 209 63.2
Lj4P912T21 Lonicera japonica HOM05D008087 ORTHO05D010187 1.2e-58 230.3 210 64.3
Cpa.g.sc28.44 Carica papaya HOM05D008087 ORTHO05D010187 1.5e-58 229.9 210 63.3
Nitab4.5_0002966g0020 Nicotiana tabacum HOM05D008087 ORTHO05D010187 1.5e-58 229.9 208 62.5
CSS0002060 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 2.0e-58 229.6 209 61.2
Duzib168G2281 Durio zibethinus HOM05D008087 ORTHO05D010187 2.6e-58 229.2 209 63.2
Sabra18G0058300 Salix brachista HOM05D008087 ORTHO05D010187 2.6e-58 229.2 211 62.1
TAR383G0588 Trochodendron aralioides HOM05D008087 ORTHO05D010187 2.6e-58 229.2 209 62.7
Potri.018G065700 Populus trichocarpa HOM05D008087 ORTHO05D010187 4.4e-58 228.4 211 62.1
RcHm_v2.0_Chr2g0094891 Rosa chinensis HOM05D008087 ORTHO05D010187 4.4e-58 228.4 208 63.5
Gohir.A06G076300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 5.8e-58 228.0 209 62.7
Gohir.D06G075300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 1.7e-57 226.5 209 62.7
CiPaw.03G206800 Carya illinoinensis HOM05D008087 ORTHO05D010187 2.2e-57 226.1 210 62.9
CSS0037579 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 4.9e-57 224.9 209 60.8
CANSAT56G3514 Cannabis sativa HOM05D008087 ORTHO05D010187 1.1e-56 223.8 203 63.1
Cc06_g12130 Coffea canephora HOM05D008087 ORTHO05D010187 1.1e-56 223.8 203 62.1
DCAR_024749 Daucus carota HOM05D008087 ORTHO05D010187 1.4e-56 223.4 203 60.6
Glyma.13G110250 Glycine max HOM05D008087 ORTHO05D010187 3.2e-56 222.2 206 61.2
Lj4g0020355 Lotus japonicus HOM05D008087 ORTHO05D010187 7.1e-56 221.1 207 59.9
Phvul.003G131000 Phaseolus vulgaris HOM05D008087 ORTHO05D010187 3.5e-55 218.8 207 59.4
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 3.5e-55 218.8 200 63.5
Rhsim05G0007800 Rhododendron simsii HOM05D008087 ORTHO05D010187 6.0e-55 218.0 209 60.8
Oeu049121.1 Olea europaea HOM05D008087 ORTHO05D010187 1.3e-54 216.9 207 59.4
VMungo1215G2436 Vigna mungo HOM05D008087 ORTHO05D010187 1.7e-54 216.5 207 58.9
Glyma.17G049450 Glycine max HOM05D008087 ORTHO05D010187 2.3e-54 216.1 206 60.2
MSTRG.19463 Avicennia marina HOM05D008087 ORTHO05D010187 8.6e-54 214.2 203 61.6
Nn8g38653 Nelumbo nucifera HOM05D008087 ORTHO05D010187 3.3e-53 212.2 209 59.3
Lalb_Chr07g0181171 Lupinus albus HOM05D008087 ORTHO05D010187 6.2e-52 208.0 207 56.5
Solyc07g041770.1 Solanum lycopersicum HOM05D008087 ORTHO05D010187 1.4e-51 206.8 209 56.0
PSO135G0253 Papaver somniferum HOM05D008087 ORTHO05D010187 3.1e-51 205.7 208 56.2
PGSC0003DMG400013001 Solanum tuberosum HOM05D008087 ORTHO05D010187 6.8e-51 204.5 209 55.0
MBI19_g11825_MAGBIO Magnolia biondii HOM05D008087 ORTHO05D010187 8.9e-51 204.1 209 55.5
Ca_21320_v3 Cicer arietinum L. HOM05D008087 ORTHO05D010187 3.4e-50 202.2 184 59.2
Migut.J00928 Erythranthe guttata HOM05D008087 ORTHO05D010187 4.4e-50 201.8 193 62.7
Psat4g017680 Pisum sativum HOM05D008087 ORTHO05D010187 4.4e-50 201.8 209 57.4
SalBow6G2426 Salvia bowleyana HOM05D008087 ORTHO05D010187 4.4e-50 201.8 205 57.1
Sopen07g021260 Solanum pennellii HOM05D008087 ORTHO05D010187 4.4e-50 201.8 209 55.0
arahy.Tifrunner.gnm1.ann1.TB6UZQ Arachis hypogaea HOM05D008087 ORTHO05D010187 7.6e-50 201.1 207 54.1
Medtr4g125370 Medicago truncatula HOM05D008087 ORTHO05D010187 4.9e-49 198.4 207 55.1
AUR62028937 Chenopodium quinoa HOM05D008087 ORTHO05D010187 8.4e-49 197.6 210 54.3
Atru.chr7.1701 Acer truncatum HOM05D002335 ORTHO05D006692 1.2e-47 193.7 182 59.9
TPR.G12579 Trifolium pratense HOM05D008087 ORTHO05D010187 3.9e-46 188.7 207 52.7
Aqoxy1G01322 Aquilegia oxysepala HOM05D008087 ORTHO05D010187 5.1e-46 188.3 207 52.7
PGR044G2582 Punica granatum HOM05D008087 ORTHO05D010187 1.9e-45 186.4 209 55.0
Duzib187G0811 Durio zibethinus HOM05D008087 ORTHO05D010187 9.9e-42 174.1 158 62.7
CSS0034066 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 3.8e-41 172.2 168 58.3
Sc08g0008880 Simmondsia chinensis HOM05D008087 ORTHO05D010187 1.9e-37 159.8 209 48.3
Nitab4.5_0000343g0200 Nicotiana tabacum HOM05D008087 ORTHO05D010187 1.8e-35 153.3 106 73.6
Peaxi162Scf00127g00202 Petunia axillaris HOM05D008087 ORTHO05D010187 2.4e-35 152.9 106 72.6
AT3G42725 Arabidopsis thaliana HOM05D008087 ORTHO05D010187 3.1e-35 152.5 204 46.6
AL5G20930 Arabidopsis lyrata HOM05D008087 ORTHO05D010187 1.5e-34 150.2 204 46.1
Ah.09g231600 Amaranthus hybridus HOM05D008087 ORTHO05D010187 2.0e-34 149.8 181 48.6
PSO724G0984 Papaver somniferum HOM05D008087 ORTHO05D010187 1.0e-30 137.5 106 66.0
Lsat_1_v5_gn_7_35101 Lactuca sativa HOM05D004023 ORTHO05D004681 1.9e-29 133.3 199 44.7
THA.LOC104811009 Tarenaya hassleriana HOM05D008087 ORTHO05D010187 5.3e-27 125.2 204 41.2
Ah.14g084950 Amaranthus hybridus HOM05D008087 ORTHO05D010187 7.1e-24 114.8 112 55.4
Dinv42391 Davidia involucrata HOM05D002335 ORTHO05D006692 2.3e-22 109.8 93 64.5
PGR044G2297 Punica granatum HOM05D008087 ORTHO05D010187 1.2e-18 97.4 122 50.8
MD15G1091800 Malus domestica HOM05D008087 ORTHO05D010187 2.9e-17 92.8 84 54.8
ATR0598G047 Amborella trichopoda HOM05D008087 ORTHO05D010187 1.1e-16 90.9 116 38.8
Zm00001eb005810 Zea mays HOM05D008087 ORTHO05D010187 4.2e-16 89.0 203 37.9
HPP92_026302 Vanilla planifolia HOM05D008087 ORTHO05D010187 4.5e-10 68.9 198 32.8
SMO358G0701 Selaginella moellendorffii HOM05D016812 ORTHO05D010187 4.2e-08 62.4 185 27.6
Aa31LG4G13290 Aethionema arabicum HOM05D008087 ORTHO05D010187 7.2e-08 61.6 122 36.1


User provided reference genes

Program Settings