Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02760 Eucalyptus grandis HOM05D008333 ORTHO05D010371 3.2e-107 391.7 193 100.0
Eucgr.I01914 Eucalyptus grandis HOM05D008333 ORTHO05D010371 3.4e-101 371.7 193 95.9
Eucgr.I01916 Eucalyptus grandis HOM05D008333 ORTHO05D010371 7.9e-82 307.4 195 80.5
Eucgr.L03696 Eucalyptus grandis HOM05D008333 ORTHO05D010371 1.8e-46 189.9 120 77.5
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 4.1e-22 109.0 145 37.2
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 1.9e-19 100.1 117 45.3
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 2.5e-19 99.8 120 41.7
Cfa007508 Carpinus fangiana HOM05D008333 ORTHO05D010371 5.6e-19 98.6 179 34.6
Thecc.04G074300 Theobroma cacao HOM05D008333 ORTHO05D010371 9.5e-19 97.8 107 49.5
Gorai.006G024100 Gossypium raimondii HOM05D008333 ORTHO05D010371 1.2e-18 97.4 124 40.3
Cfa021167 Carpinus fangiana HOM05D008333 ORTHO05D010371 1.6e-18 97.1 108 42.6
QL02p080535 Quercus lobata HOM05D008333 ORTHO05D010371 1.6e-18 97.1 122 40.2
Manes.17G020900 Manihot esculenta HOM05D008333 ORTHO05D010371 4.7e-18 95.5 122 40.2
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 6.2e-18 95.1 126 41.3
Haze_14585 Corylus avellana HOM05D008333 ORTHO05D010371 1.4e-17 94.0 108 40.7
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 4.0e-17 92.4 151 35.8
Gohir.D09G020400 Gossypium hirsutum HOM05D008333 ORTHO05D010371 8.9e-17 91.3 124 38.7
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.2e-16 90.9 127 36.2
Gorai.006G023800 Gossypium raimondii HOM05D008333 ORTHO05D010371 2.6e-16 89.7 111 39.6
CiPaw.03G030300 Carya illinoinensis HOM05D008333 ORTHO05D010371 1.7e-15 87.0 108 38.9
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 2.2e-15 86.7 116 34.5
CSS0029447 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 3.7e-15 85.9 141 36.2
CSS0048142 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 3.7e-15 85.9 141 36.2
VMungo0464G0738 Vigna mungo HOM05D008333 ORTHO05D010371 3.7e-15 85.9 111 40.5
Lj7P401T71 Lonicera japonica HOM05D008333 ORTHO05D010371 1.1e-14 84.3 118 35.6
Gohir.D09G020550 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.2e-13 80.9 86 44.2
Rhsim08G0066000 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.5e-13 79.3 135 34.8
Glyma.18G255500 Glycine max HOM05D008333 ORTHO05D010371 4.6e-13 79.0 112 34.8
Phvul.004G025900 Phaseolus vulgaris HOM05D008333 ORTHO05D010371 4.6e-13 79.0 111 38.7
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 2.3e-12 76.6 137 33.6
Rhsim08G0065600 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.9e-12 75.9 137 32.8
Rhsim08G0065900 Rhododendron simsii HOM05D008333 ORTHO05D010371 5.1e-12 75.5 135 33.3
Rhsim08G0065500 Rhododendron simsii HOM05D008333 ORTHO05D010371 6.6e-12 75.1 135 33.3
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 1.5e-11 73.9 114 30.7
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 1.5e-11 73.9 114 30.7
Rhsim08G0065800 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.5e-11 73.9 118 36.4
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 1.9e-11 73.6 114 30.7
Rhsim08G0065000 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.9e-11 73.6 136 33.1
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 2.5e-11 73.2 108 30.6
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 2.5e-11 73.2 108 30.6
Rhsim08G0065200 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.5e-11 73.2 137 32.1
RcHm_v2.0_Chr2g0169171 Rosa chinensis HOM05D008333 ORTHO05D010371 3.3e-11 72.8 117 32.5
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 4.3e-11 72.4 140 27.9
Actinidia38746 Actinidia chinensis HOM05D008333 ORTHO05D010371 9.5e-11 71.2 126 36.5
Rhsim08G0065700 Rhododendron simsii HOM05D008333 ORTHO05D010371 9.5e-11 71.2 113 37.2
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.1e-10 70.1 144 31.9
Rhsim08G0065400 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.1e-10 70.1 118 35.6
Rhsim08G0065300 Rhododendron simsii HOM05D008333 ORTHO05D010371 6.2e-10 68.6 113 37.2
PGSC0003DMG400016257 Solanum tuberosum HOM05D008333 ORTHO05D010371 1.4e-09 67.4 109 31.2
TAR371G0090 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.8e-09 67.0 114 31.6
CSS0005469 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 3.4e-08 62.8 139 28.8
Lsat_1_v5_gn_4_179800 Lactuca sativa HOM05D019919 ORTHO05D010371 1.4e-06 57.4 120 29.2
TPR.G7262 Trifolium pratense HOM05D008333 ORTHO05D010371 1.9e-06 57.0 104 30.8


User provided reference genes

Program Settings