Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02712 Eucalyptus grandis HOM05D000136 ORTHO05D033943 1.9e-66 255.8 131 100.0
Eucgr.F03866 Eucalyptus grandis HOM05D000136 ORTHO05D007933 1.2e-46 189.9 100 97.0
PGR102G0618 Punica granatum HOM05D000136 ORTHO05D007933 7.4e-15 84.3 104 53.8
Gorai.009G131100 Gossypium raimondii HOM05D000136 ORTHO05D007933 2.0e-12 76.3 105 48.6
Lj3g0013985 Lotus japonicus HOM05D000136 ORTHO05D007933 2.0e-12 76.3 100 50.0
QL05p029505 Quercus lobata HOM05D000136 ORTHO05D007933 7.6e-12 74.3 110 51.8
Gohir.A05G126100 Gossypium hirsutum HOM05D000136 ORTHO05D007933 1.3e-11 73.6 105 47.6
Gohir.D05G127000 Gossypium hirsutum HOM05D000136 ORTHO05D007933 3.8e-11 72.0 105 46.7
Nn8g39468 Nelumbo nucifera HOM05D000136 ORTHO05D007933 1.9e-10 69.7 88 54.5
Peaxi162Scf00034g00143 Petunia axillaris HOM05D000136 ORTHO05D007933 1.9e-10 69.7 102 47.1
Duzib160G0787 Durio zibethinus HOM05D000136 ORTHO05D007933 3.2e-10 68.9 105 45.7
GSVIVG01017322001 Vitis vinifera HOM05D000136 ORTHO05D007933 1.2e-09 67.0 105 51.4
Dinv30596 Davidia involucrata HOM05D000136 ORTHO05D007933 2.1e-09 66.2 107 48.6
Prupe.3G085200 Prunus persica HOM05D000136 ORTHO05D007933 2.1e-09 66.2 113 46.0
Manes.04G113600 Manihot esculenta HOM05D000136 ORTHO05D007933 2.7e-09 65.9 102 46.1
COL.COLO4_12953 Corchorus olitorius HOM05D000136 ORTHO05D007933 3.5e-09 65.5 103 46.6
CSS0012664 Camellia sinensis var. sinensis HOM05D000136 ORTHO05D033943 4.6e-09 65.1 109 43.1
THA.LOC104818026 Tarenaya hassleriana HOM05D000136 ORTHO05D007933 4.6e-09 65.1 108 43.5
VMungo0331G0391 Vigna mungo HOM05D000136 ORTHO05D007933 1.3e-08 63.5 102 46.1
Rhsim08G0213800 Rhododendron simsii HOM05D000136 ORTHO05D033943 2.3e-08 62.8 98 42.9
C06p07980 Brassica napus HOM05D000136 ORTHO05D007933 3.0e-08 62.4 103 43.7
BolC6t35881H Brassica oleracea HOM05D000136 ORTHO05D007933 3.0e-08 62.4 103 43.7
BraA06t23395Z Brassica rapa HOM05D000136 ORTHO05D007933 3.0e-08 62.4 103 43.7
MD17G1209800 Malus domestica HOM05D000136 ORTHO05D007933 3.9e-08 62.0 114 43.0
CANSAT56G3249 Cannabis sativa HOM05D000136 ORTHO05D007933 8.7e-08 60.8 105 43.8
Thecc.06G021900 Theobroma cacao HOM05D000136 ORTHO05D007933 8.7e-08 60.8 124 41.9
vmacro18991 Vaccinium macrocarpon HOM05D000136 ORTHO05D007933 8.7e-08 60.8 100 43.0
Aa31LG10G2450 Aethionema arabicum HOM05D000136 ORTHO05D007933 1.5e-07 60.1 103 42.7
Medtr4g010320 Medicago truncatula HOM05D000136 ORTHO05D007933 1.5e-07 60.1 98 49.0
Potri.001G192600 Populus trichocarpa HOM05D000136 ORTHO05D007933 1.9e-07 59.7 113 38.9
TAR625G0530 Trochodendron aralioides HOM05D000136 ORTHO05D007933 1.9e-07 59.7 108 39.8
arahy.Tifrunner.gnm1.ann1.Y4YZQQ Arachis hypogaea HOM05D000136 ORTHO05D007933 3.3e-07 58.9 105 41.0
Haze_16544 Corylus avellana HOM05D000136 ORTHO05D007933 3.3e-07 58.9 100 42.0
Glyma.08G212000 Glycine max HOM05D000136 ORTHO05D007933 4.3e-07 58.5 100 45.0
Ciclev10026390m.g Citrus clementina HOM05D000136 ORTHO05D007933 5.7e-07 58.2 114 42.1
Oeu027808.1 Olea europaea HOM05D000020 ORTHO05D000543 1.3e-06 57.0 103 42.7
TWI18G0508 Tripterygium wilfordii HOM05D000136 ORTHO05D007933 1.3e-06 57.0 129 39.5
TWI75G1547 Tripterygium wilfordii HOM05D000136 ORTHO05D007933 1.3e-06 57.0 112 41.1
AL1G60810 Arabidopsis lyrata HOM05D000136 ORTHO05D007933 2.2e-06 56.2 103 43.7
Hund00524 Selenicereus undatus HOM05D000136 ORTHO05D007933 3.7e-06 55.5 103 44.7
CARHR042670 Cardamine hirsuta HOM05D000136 ORTHO05D007933 6.3e-06 54.7 101 44.6
Atru.chr1.2988 Acer truncatum HOM05D000136 ORTHO05D007933 8.2e-06 54.3 105 40.0


User provided reference genes

Program Settings