Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02640 Eucalyptus grandis HOM05D004757 ORTHO05D005743 3.7e-91 338.2 171 100.0
Manes.06G022800 Manihot esculenta HOM05D004757 ORTHO05D005743 3.1e-29 132.5 110 60.0
Atru.chr7.878 Acer truncatum HOM05D004757 ORTHO05D005743 5.3e-29 131.7 117 60.7
MELO3C017451.2 Cucumis melo HOM05D004757 ORTHO05D005743 9.9e-28 127.5 123 52.0
TWI34G1741 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 9.9e-28 127.5 117 56.4
TWI63G0987 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 2.2e-27 126.3 117 55.6
CsaV3_1G031720 Cucumis sativus L. HOM05D004757 ORTHO05D005743 4.9e-27 125.2 114 54.4
Manes.14G157383 Manihot esculenta HOM05D004757 ORTHO05D005743 1.1e-26 124.0 118 56.8
PGR044G0017 Punica granatum HOM05D004757 ORTHO05D005743 1.4e-26 123.6 109 54.1
Haze_21940 Corylus avellana HOM05D004757 ORTHO05D005743 1.9e-26 123.2 118 53.4
A07p01750 Brassica napus HOM05D004757 ORTHO05D005743 3.2e-26 122.5 119 56.3
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 3.2e-26 122.5 119 56.3
Potri.006G166400 Populus trichocarpa HOM05D004757 ORTHO05D005743 3.2e-26 122.5 129 53.5
Aa31LG8G16000 Aethionema arabicum HOM05D004757 ORTHO05D005743 4.2e-26 122.1 115 58.3
Cfa013398 Carpinus fangiana HOM05D004757 ORTHO05D005743 4.2e-26 122.1 110 56.4
ClCG06G013460 Citrullus lanatus HOM05D004757 ORTHO05D005743 4.2e-26 122.1 115 55.7
AL3G53010 Arabidopsis lyrata HOM05D004757 ORTHO05D005743 1.6e-25 120.2 112 56.2
AT2G18910 Arabidopsis thaliana HOM05D004757 ORTHO05D005743 1.6e-25 120.2 119 55.5
CARHR109470 Cardamine hirsuta HOM05D004757 ORTHO05D005743 1.6e-25 120.2 108 56.5
A09p12120 Brassica napus HOM05D004757 ORTHO05D005743 2.1e-25 119.8 118 53.4
BcaB07g31638 Brassica carinata HOM05D004757 ORTHO05D005743 3.5e-25 119.0 112 55.4
BcaC04g22879 Brassica carinata HOM05D004757 ORTHO05D005743 3.5e-25 119.0 112 55.4
Carub.0003s3315 Capsella rubella HOM05D004757 ORTHO05D005743 3.5e-25 119.0 119 55.5
Sed0015670 Sechium edule HOM05D004757 ORTHO05D005743 3.5e-25 119.0 111 53.2
C07p03670 Brassica napus HOM05D004757 ORTHO05D005743 4.6e-25 118.6 121 56.2
BolC3t18202H Brassica oleracea HOM05D004757 ORTHO05D005743 4.6e-25 118.6 119 57.1
BolC7t40764H Brassica oleracea HOM05D004757 ORTHO05D005743 4.6e-25 118.6 121 56.2
Potri.018G090900 Populus trichocarpa HOM05D004757 ORTHO05D005743 4.6e-25 118.6 127 54.3
CiPaw.07G193700 Carya illinoinensis HOM05D004757 ORTHO05D005743 6.0e-25 118.2 110 53.6
A06p33080 Brassica napus HOM05D004757 ORTHO05D005743 1.3e-24 117.1 118 55.9
C03p59380 Brassica napus HOM05D004757 ORTHO05D005743 2.3e-24 116.3 119 56.3
BcaC06g36489 Brassica carinata HOM05D004757 ORTHO05D005743 3.0e-24 115.9 122 54.1
BraA09t36856Z Brassica rapa HOM05D004757 ORTHO05D005743 6.7e-24 114.8 118 52.5
THA.LOC104803943 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 6.7e-24 114.8 117 54.7
C09p14310 Brassica napus HOM05D004757 ORTHO05D005743 8.7e-24 114.4 124 51.6
Actinidia19844 Actinidia chinensis HOM05D004757 ORTHO05D005743 1.1e-23 114.0 118 52.5
BcaB03g16684 Brassica carinata HOM05D004757 ORTHO05D005743 1.1e-23 114.0 119 52.9
CiPaw.08G035200 Carya illinoinensis HOM05D004757 ORTHO05D005743 2.5e-23 112.8 147 45.6
BraA06t26238Z Brassica rapa HOM05D004757 ORTHO05D005743 4.3e-23 112.1 120 55.0
Lalb_Chr13g0300141 Lupinus albus HOM05D004757 ORTHO05D005743 5.6e-23 111.7 105 54.3
TAR626G1857 Trochodendron aralioides HOM05D004757 ORTHO05D005743 5.6e-23 111.7 122 50.8
BolC9t54334H Brassica oleracea HOM05D004757 ORTHO05D005743 9.6e-23 110.9 122 50.8
Glyma.17G062100 Glycine max HOM05D004757 ORTHO05D005743 1.6e-22 110.2 119 52.9
Prupe.1G082700 Prunus persica HOM05D004757 ORTHO05D005743 1.6e-22 110.2 108 51.9
Medtr4g127810 Medicago truncatula HOM05D004757 ORTHO05D005743 2.8e-22 109.4 120 51.7
Duzib150G0244 Durio zibethinus HOM05D004757 ORTHO05D005743 6.2e-22 108.2 114 53.5
Lj4g0011233 Lotus japonicus HOM05D004757 ORTHO05D005743 6.2e-22 108.2 111 50.5
Sp3g32380 Schrenkiella parvula HOM05D004757 ORTHO05D005743 6.2e-22 108.2 118 50.8
Gohir.D08G030000 Gossypium hirsutum HOM05D004757 ORTHO05D005743 1.1e-21 107.5 120 50.8
Actinidia01305 Actinidia chinensis HOM05D004757 ORTHO05D005743 1.4e-21 107.1 118 51.7
THA.LOC104803488 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 1.4e-21 107.1 111 51.4
Ca_21237_v3 Cicer arietinum L. HOM05D004757 ORTHO05D005743 2.4e-21 106.3 113 50.4
TPR.G5446 Trifolium pratense HOM05D004757 ORTHO05D005743 3.1e-21 105.9 124 47.6
Cpa.g.sc95.44 Carica papaya HOM05D004757 ORTHO05D005743 5.3e-21 105.1 110 52.7
Duzib170G0153 Durio zibethinus HOM05D004757 ORTHO05D005743 5.3e-21 105.1 125 53.6
Gorai.004G027500 Gossypium raimondii HOM05D004757 ORTHO05D005743 5.3e-21 105.1 120 50.0
Dinv19553 Davidia involucrata HOM05D004757 ORTHO05D005743 9.0e-21 104.4 132 47.0
Glyma.13G097500 Glycine max HOM05D004757 ORTHO05D005743 1.5e-20 103.6 119 52.1
Gohir.D08G093400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 1.5e-20 103.6 114 50.9
Gorai.004G099000 Gossypium raimondii HOM05D004757 ORTHO05D005743 1.5e-20 103.6 114 50.9
Sed0003925 Sechium edule HOM05D004757 ORTHO05D005743 1.5e-20 103.6 114 50.0
Ciclev10009829m.g Citrus clementina HOM05D004757 ORTHO05D005743 2.0e-20 103.2 126 50.0
Psat4g012760 Pisum sativum HOM05D004757 ORTHO05D005743 3.4e-20 102.4 125 47.2
HanXRQChr09g0244371 Helianthus annuus HOM05D004757 ORTHO05D005743 4.5e-20 102.1 129 48.1
Gohir.A08G083700 Gossypium hirsutum HOM05D004757 ORTHO05D005743 5.8e-20 101.7 114 50.0
HanXRQChr09g0254201 Helianthus annuus HOM05D004757 ORTHO05D005743 1.0e-19 100.9 126 46.8
Lsat_1_v5_gn_7_54961 Lactuca sativa HOM05D004757 ORTHO05D005743 1.0e-19 100.9 132 46.2
Migut.K00229 Erythranthe guttata HOM05D004757 ORTHO05D005743 1.3e-19 100.5 111 48.6
Hund09034 Selenicereus undatus HOM05D004757 ORTHO05D005743 1.3e-19 100.5 124 48.4
TAR383G0800 Trochodendron aralioides HOM05D004757 ORTHO05D005743 1.3e-19 100.5 143 43.4
MD16G1255800 Malus domestica HOM05D004757 ORTHO05D005743 1.7e-19 100.1 121 48.8
Thecc.09G175100 Theobroma cacao HOM05D004757 ORTHO05D005743 1.7e-19 100.1 119 52.1
PGR142G2781 Punica granatum HOM05D004757 ORTHO05D005743 2.2e-19 99.8 119 48.7
Sc08g0005260 Simmondsia chinensis HOM05D004757 ORTHO05D005743 2.2e-19 99.8 116 46.6
VMungo1215G0044 Vigna mungo HOM05D004757 ORTHO05D005743 2.2e-19 99.8 115 46.1
Duzib168G0914 Durio zibethinus HOM05D004757 ORTHO05D005743 2.9e-19 99.4 123 50.4
Phvul.003G144000 Phaseolus vulgaris HOM05D004757 ORTHO05D005743 2.9e-19 99.4 110 47.3
Sc14g0001290 Simmondsia chinensis HOM05D004757 ORTHO05D005743 2.9e-19 99.4 128 44.5
Gohir.A08G019400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 3.8e-19 99.0 118 47.5
QL02p098330 Quercus lobata HOM05D004757 ORTHO05D005743 3.8e-19 99.0 114 50.0
EL10Ac8g18296 Beta vulgaris HOM05D004757 ORTHO05D005743 4.9e-19 98.6 122 47.5
Eucgr.C00145 Eucalyptus grandis HOM05D004757 ORTHO05D005743 6.5e-19 98.2 120 47.5
Thhalv10022848m.g Eutrema salsugineum HOM05D004757 ORTHO05D005743 6.5e-19 98.2 118 49.2
Ah.14g083740 Amaranthus hybridus HOM05D004757 ORTHO05D005743 1.1e-18 97.4 121 46.3
Lalb_Chr12g0199461 Lupinus albus HOM05D004757 ORTHO05D005743 1.1e-18 97.4 111 46.8
Oeu025694.3 Olea europaea HOM05D004757 ORTHO05D005743 1.1e-18 97.4 134 44.0
HanXRQChr05g0142021 Helianthus annuus HOM05D004757 ORTHO05D005743 1.4e-18 97.1 112 48.2
Lsat_1_v5_gn_8_68041 Lactuca sativa HOM05D004757 ORTHO05D005743 1.4e-18 97.1 110 47.3
ECA236G5014 Erigeron canadensis HOM05D004757 ORTHO05D005743 3.2e-18 95.9 106 49.1
Aqoxy7G02958 Aquilegia oxysepala HOM05D004757 ORTHO05D005743 4.2e-18 95.5 139 43.2
RcHm_v2.0_Chr4g0401201 Rosa chinensis HOM05D004757 ORTHO05D005743 5.5e-18 95.1 113 45.1
FAN17G1906 Fragaria x ananassa HOM05D004757 ORTHO05D005743 7.1e-18 94.7 109 46.8
Peaxi162Scf01558g00012 Petunia axillaris HOM05D004757 ORTHO05D005743 9.3e-18 94.4 126 43.7
HPP92_015369 Vanilla planifolia HOM05D004757 ORTHO05D005743 9.3e-18 94.4 130 46.9
FvH4_4g07900 Fragaria vesca HOM05D004757 ORTHO05D005743 1.6e-17 93.6 114 44.7
unitig_21.g20652 Utricularia gibba HOM05D004757 ORTHO05D005743 1.6e-17 93.6 115 48.7
Hma1.2p1_0935F.1_g238550 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 2.7e-17 92.8 115 47.0
Sabra06G0128000 Salix brachista HOM05D004757 ORTHO05D005743 2.7e-17 92.8 179 38.5
MSTRG.19719 Avicennia marina HOM05D004757 ORTHO05D005743 6.0e-17 91.7 126 45.2
ECA234G2687 Erigeron canadensis HOM05D004757 ORTHO05D005743 6.0e-17 91.7 115 43.5
Hma1.2p1_1303F.1_g274440 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 6.0e-17 91.7 136 39.0
Lsat_1_v5_gn_5_85101 Lactuca sativa HOM05D004757 ORTHO05D005743 6.0e-17 91.7 116 45.7
SGA_v2.0_scaffold66G22433 Striga asiatica HOM05D004757 ORTHO05D005743 7.9e-17 91.3 123 44.7
Rhsim01G0003200 Rhododendron simsii HOM05D004757 ORTHO05D005743 1.3e-16 90.5 123 42.3
ECA240G0762 Erigeron canadensis HOM05D004757 ORTHO05D005743 1.8e-16 90.1 106 47.2
Migut.J01503 Erythranthe guttata HOM05D004757 ORTHO05D005743 1.8e-16 90.1 113 46.0
Oeu025209.1 Olea europaea HOM05D004757 ORTHO05D005743 2.3e-16 89.7 118 45.8
Solyc07g006960.3 Solanum lycopersicum HOM05D004757 ORTHO05D005743 2.3e-16 89.7 121 44.6
Hma1.2p1_2317F.1_g319740 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 3.0e-16 89.4 115 45.2
TAR636G1688 Trochodendron aralioides HOM05D004757 ORTHO05D005743 6.7e-16 88.2 120 45.0
SalBow6G1691 Salvia bowleyana HOM05D004757 ORTHO05D005743 8.7e-16 87.8 118 44.9
CSS0015413 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 1.1e-15 87.4 115 43.5
CAN.G1464.4 Capsicum annuum HOM05D004757 ORTHO05D005743 1.1e-15 87.4 108 47.2
CDE04G2108 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 1.1e-15 87.4 110 42.7
MD13G1249500 Malus domestica HOM05D004757 ORTHO05D005743 1.1e-15 87.4 120 45.0
CSS0012735 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 1.9e-15 86.7 131 39.7
Nitab4.5_0010128g0010 Nicotiana tabacum HOM05D004757 ORTHO05D005743 1.9e-15 86.7 127 43.3
PGSC0003DMG400018757 Solanum tuberosum HOM05D004757 ORTHO05D005743 1.9e-15 86.7 118 44.9
DCAR_020127 Daucus carota HOM05D004757 ORTHO05D005743 3.3e-15 85.9 141 39.0
ATR0580G064 Amborella trichopoda HOM05D004757 ORTHO05D005743 9.6e-15 84.3 107 44.9
Sabra18G0078100 Salix brachista HOM05D004757 ORTHO05D005743 9.6e-15 84.3 175 38.3
CANSAT11G1025 Cannabis sativa HOM05D004757 ORTHO05D005743 1.6e-14 83.6 114 43.0
PSO170G5353 Papaver somniferum HOM05D004757 ORTHO05D005743 1.6e-14 83.6 165 34.5
Nn2g12725 Nelumbo nucifera HOM05D004757 ORTHO05D005743 3.7e-14 82.4 139 38.8
MSTRG.6239 Avicennia marina HOM05D004757 ORTHO05D005743 4.8e-14 82.0 124 40.3
PSO063G6152 Papaver somniferum HOM05D004757 ORTHO05D005743 4.8e-14 82.0 155 34.8
CDE02G3269 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 6.2e-14 81.6 110 41.8
FAN12G2780 Fragaria x ananassa HOM05D004757 ORTHO05D005743 1.4e-13 80.5 137 37.2
GSVIVG01035530001 Vitis vinifera HOM05D004757 ORTHO05D005743 1.4e-13 80.5 114 43.0
Cc06_g12990 Coffea canephora HOM05D004757 ORTHO05D005743 1.8e-13 80.1 137 38.0
MBI16_g31788_MAGBIO Magnolia biondii HOM05D004757 ORTHO05D005743 1.8e-13 80.1 137 35.8
Sopen07g003050 Solanum pennellii HOM05D004757 ORTHO05D005743 1.8e-13 80.1 124 41.1
FAN07G0988 Fragaria x ananassa HOM05D004757 ORTHO05D005743 5.3e-13 78.6 137 36.5
FAN22G2108 Fragaria x ananassa HOM05D004757 ORTHO05D005743 5.3e-13 78.6 137 36.5
Zm00001eb420280 Zea mays HOM05D004757 ORTHO05D005743 5.3e-13 78.6 151 36.4
ATR0030G045 Amborella trichopoda HOM05D004757 ORTHO05D005743 9.0e-13 77.8 122 40.2
Nn8g40409 Nelumbo nucifera HOM05D004757 ORTHO05D005743 1.2e-12 77.4 140 36.4
HanXRQChr10g0308501 Helianthus annuus HOM05D004757 ORTHO05D005743 4.5e-12 75.5 110 41.8
Ah.09g229970 Amaranthus hybridus HOM05D004757 ORTHO05D005743 5.8e-12 75.1 149 36.2
AUR62043442 Chenopodium quinoa HOM05D000216 ORTHO05D003518 5.0e-11 72.0 71 49.3
Peaxi162Scf00200g01819 Petunia axillaris HOM05D004757 ORTHO05D005743 5.0e-11 72.0 82 45.1
vmacro13132 Vaccinium macrocarpon HOM05D004757 ORTHO05D005743 2.5e-10 69.7 139 36.0
Zm00001eb180540 Zea mays HOM05D004757 ORTHO05D005743 3.5e-09 65.9 94 40.4
Peaxi162Scf00200g00183 Petunia axillaris HOM05D004757 ORTHO05D005743 6.1e-09 65.1 89 40.4
Zm00001eb087060 Zea mays HOM05D004757 ORTHO05D005743 6.1e-09 65.1 65 47.7
Zm00001eb236700 Zea mays HOM05D004757 ORTHO05D005743 8.7e-08 61.2 152 30.3
Os02g0461900 Oryza sativa ssp. japonica HOM05D004757 ORTHO05D005743 1.3e-06 57.4 163 30.1
Dinv41223 Davidia involucrata HOM05D004757 ORTHO05D005743 2.8e-06 56.2 108 40.7
AUR62021312 Chenopodium quinoa HOM05D004757 ORTHO05D005743 3.7e-06 55.8 96 40.6


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