Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 1.8e-124 449.1 210 100.0
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 2.0e-118 429.1 202 98.5
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 1.5e-105 386.3 202 85.1
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 1.6e-104 382.9 202 84.7
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 1.5e-102 376.3 202 82.2
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 1.5e-102 376.3 202 82.7
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 2.0e-102 375.9 202 81.7
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 2.6e-102 375.6 202 83.2
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 2.6e-102 375.6 202 83.2
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 2.6e-102 375.6 202 82.2
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 2.6e-102 375.6 202 82.2
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 3.4e-102 375.2 202 81.2
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 3.4e-102 375.2 202 83.2
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 3.4e-102 375.2 202 82.7
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 5.7e-102 374.4 202 81.2
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 8.3e-101 370.5 202 80.7
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 8.3e-101 370.5 202 82.7
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 2.4e-100 369.0 202 82.2
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 3.1e-100 368.6 201 81.1
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 5.4e-100 367.9 202 81.2
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 1.2e-99 366.7 202 81.7
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 1.6e-99 366.3 202 80.2
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 1.6e-99 366.3 202 80.7
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 2.0e-99 365.9 202 79.7
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 3.5e-99 365.2 202 80.7
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 3.5e-99 365.2 202 79.2
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 3.5e-99 365.2 202 79.7
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 7.7e-99 364.0 202 78.7
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.0e-98 363.6 202 81.2
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 1.7e-98 362.8 202 80.2
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 2.9e-98 362.1 205 77.6
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 2.9e-98 362.1 202 79.7
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 2.9e-98 362.1 202 78.2
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 2.9e-98 362.1 202 78.7
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 1.1e-97 360.1 202 79.2
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 1.5e-97 359.8 202 79.7
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 1.5e-97 359.8 202 80.2
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 2.5e-97 359.0 202 77.7
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 3.3e-97 358.6 202 79.2
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 5.5e-97 357.8 202 78.2
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 7.2e-97 357.5 202 78.7
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 9.5e-97 357.1 202 79.2
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 9.5e-97 357.1 202 79.2
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 1.6e-96 356.3 201 76.6
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 1.6e-96 356.3 201 76.6
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 1.6e-96 356.3 202 77.2
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 2.8e-96 355.5 202 77.7
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 2.8e-96 355.5 202 76.7
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 3.6e-96 355.1 237 70.5
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 3.6e-96 355.1 201 78.6
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 4.7e-96 354.8 202 79.2
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 4.7e-96 354.8 202 76.7
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 4.7e-96 354.8 202 78.7
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 6.1e-96 354.4 202 77.7
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 1.0e-95 353.6 202 77.2
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 1.4e-95 353.2 202 77.2
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 1.4e-95 353.2 202 77.2
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.8e-95 352.8 202 78.2
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 1.8e-95 352.8 202 78.7
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 1.8e-95 352.8 202 77.7
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 3.0e-95 352.1 202 77.7
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 4.0e-95 351.7 202 77.2
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 4.0e-95 351.7 202 76.7
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 4.0e-95 351.7 202 76.7
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 4.0e-95 351.7 200 76.5
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 4.0e-95 351.7 202 76.7
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 4.0e-95 351.7 201 76.6
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 6.8e-95 350.9 202 76.7
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 6.8e-95 350.9 202 75.7
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 6.8e-95 350.9 202 76.2
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 1.2e-94 350.1 202 76.2
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 2.6e-94 349.0 202 76.7
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 3.4e-94 348.6 202 76.7
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 5.7e-94 347.8 202 76.7
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 7.5e-94 347.4 202 77.7
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 1.7e-93 346.3 200 76.0
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 2.2e-93 345.9 201 74.1
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 2.8e-93 345.5 202 75.7
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 1.1e-92 343.6 202 75.2
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 2.0e-91 339.3 202 74.3
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 2.7e-91 339.0 202 74.3
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 1.7e-90 336.3 202 76.2
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 1.5e-89 333.2 202 71.8
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 1.2e-88 330.1 232 65.9
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 3.4e-86 322.0 204 71.1
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 1.7e-85 319.7 205 69.3
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 8.0e-80 300.8 174 77.0
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.4e-79 300.1 159 79.9
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 5.8e-78 294.7 172 75.0
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.7e-77 293.1 159 77.4
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 1.4e-76 290.0 202 68.8
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 2.9e-69 265.8 202 63.9
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 2.4e-68 262.7 152 77.6
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 5.1e-66 255.0 202 58.4
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 8.9e-63 244.2 214 52.8
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 4.3e-57 225.3 156 64.7
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 6.4e-53 211.5 119 79.0
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 3.0e-50 202.6 208 49.5
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 1.2e-46 190.7 243 47.3
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 9.9e-46 187.6 193 51.3
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 3.0e-42 176.0 213 43.7
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.0e-34 149.4 82 80.5
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 2.5e-25 119.8 81 63.0
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 4.3e-25 119.0 85 64.7
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.7e-11 72.4 59 55.9


User provided reference genes

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