Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 8.7e-117 423.7 221 100.0
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.4e-114 416.4 221 98.2
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 6.3e-67 258.1 209 65.1
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 1.8e-66 256.5 207 65.7
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 2.4e-66 256.1 212 65.6
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 1.2e-65 253.8 209 65.1
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 1.3e-64 250.4 212 64.2
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 5.0e-64 248.4 205 66.3
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 1.5e-63 246.9 206 67.5
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 1.9e-63 246.5 209 65.1
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 7.2e-63 244.6 204 66.2
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 2.1e-62 243.0 214 63.6
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 2.7e-62 242.7 186 68.8
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.0e-61 240.7 184 68.5
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 1.8e-61 240.0 209 65.6
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 2.3e-61 239.6 210 64.8
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 4.0e-61 238.8 210 65.2
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 6.7e-61 238.0 210 64.8
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 1.1e-60 237.3 211 65.4
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 3.3e-60 235.7 183 68.9
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 3.3e-60 235.7 212 64.6
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 3.3e-60 235.7 212 63.7
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 9.7e-60 234.2 207 62.8
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 2.8e-59 232.6 207 61.4
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 3.7e-59 232.3 207 60.9
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 6.3e-59 231.5 198 63.6
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 1.4e-58 230.3 212 63.7
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.8e-58 229.9 196 63.8
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 5.3e-58 228.4 212 62.3
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 7.0e-58 228.0 204 59.8
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 7.0e-58 228.0 213 62.9
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 7.0e-58 228.0 171 70.2
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 9.1e-58 227.6 213 62.4
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 1.6e-57 226.9 211 62.1
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 2.7e-57 226.1 184 63.0
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 2.7e-57 226.1 221 61.5
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 3.5e-57 225.7 213 62.4
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 5.9e-57 224.9 221 61.1
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 1.3e-56 223.8 209 63.6
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 1.3e-56 223.8 209 60.8
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 2.2e-56 223.0 209 60.3
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 2.2e-56 223.0 221 61.1
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 6.5e-56 221.5 166 69.9
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 1.5e-55 220.3 201 62.2
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 1.9e-55 219.9 177 66.7
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 2.5e-55 219.5 211 60.7
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 3.2e-55 219.2 207 60.4
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 4.2e-55 218.8 211 62.1
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.2e-55 218.8 211 62.1
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 5.5e-55 218.4 185 65.9
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 9.4e-55 217.6 214 59.3
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 1.2e-54 217.2 207 59.9
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 1.2e-54 217.2 207 60.4
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 1.6e-54 216.9 201 62.2
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.7e-54 215.3 211 61.1
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 1.0e-53 214.2 205 60.5
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 1.0e-53 214.2 180 65.6
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 1.0e-53 214.2 175 66.3
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 1.4e-53 213.8 221 57.9
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 2.3e-53 213.0 212 58.5
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 3.0e-53 212.6 215 55.3
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 4.0e-53 212.2 205 60.5
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 5.2e-53 211.8 213 56.3
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 1.2e-52 210.7 211 59.7
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 2.0e-52 209.9 209 57.4
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 2.6e-52 209.5 183 64.5
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 2.6e-52 209.5 237 51.9
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 4.4e-52 208.8 186 62.9
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 4.4e-52 208.8 171 67.3
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 5.7e-52 208.4 186 62.9
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 7.5e-52 208.0 172 64.5
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.3e-51 207.2 186 62.4
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 1.7e-51 206.8 168 65.5
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 2.2e-51 206.5 203 58.1
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 2.8e-51 206.1 172 66.3
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 6.3e-51 204.9 172 64.0
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 6.3e-51 204.9 181 64.1
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.4e-50 203.0 156 69.2
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 2.4e-50 203.0 189 58.7
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 5.4e-50 201.8 169 65.7
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 9.1e-50 201.1 176 64.8
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 1.6e-49 200.3 186 59.7
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 2.0e-49 199.9 193 59.6
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 3.5e-49 199.1 212 56.6
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 4.5e-49 198.7 167 64.1
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 5.9e-49 198.4 212 53.8
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 1.0e-48 197.6 167 64.1
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 8.5e-48 194.5 137 72.3
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 1.1e-47 194.1 144 72.2
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 1.5e-47 193.7 140 73.6
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.9e-47 193.4 175 61.1
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 4.2e-47 192.2 173 61.8
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 9.5e-47 191.0 158 65.2
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 4.7e-46 188.7 201 55.2
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 8.8e-45 184.5 191 53.9
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 8.8e-45 184.5 134 70.9
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.2e-44 184.1 192 55.2
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 9.2e-42 174.5 143 67.1
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 1.7e-40 170.2 128 71.9
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 3.0e-37 159.5 140 59.3
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 3.0e-32 142.9 142 54.2
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.5e-31 140.6 101 72.3
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 4.3e-31 139.0 136 58.1
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 1.6e-30 137.1 134 53.7
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 1.5e-28 130.6 142 47.2
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 2.0e-28 130.2 124 55.6
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 1.3e-27 127.5 104 63.5
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 5.4e-18 95.5 70 71.4
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 4.6e-17 92.4 119 46.2
ATR0741G001 Amborella trichopoda HOM05D007072 ORTHO05D008841 8.1e-06 55.1 54 59.3


User provided reference genes

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