Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.7e-237 825.9 495 100.0
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 5.5e-212 741.1 584 81.5
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 1.1e-138 497.7 597 55.4
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 1.7e-136 490.3 597 55.1
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 4.6e-134 482.3 595 50.9
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 2.3e-133 479.9 597 50.6
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 5.6e-132 475.3 596 53.2
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 7.3e-132 474.9 598 54.7
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 2.1e-131 473.4 592 53.4
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 2.8e-131 473.0 591 51.8
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 8.1e-131 471.5 592 59.0
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 1.4e-130 470.7 592 53.2
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 4.0e-130 469.2 596 51.5
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 3.4e-129 466.1 593 53.5
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 2.3e-125 453.4 598 54.3
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.1e-124 451.1 594 51.3
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 2.5e-124 449.9 595 57.0
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 1.6e-123 447.2 580 57.6
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 2.1e-123 446.8 592 51.0
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 2.1e-123 446.8 599 49.4
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 1.1e-122 444.5 589 51.6
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.8e-122 443.7 604 56.3
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.8e-122 443.7 594 52.2
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 1.2e-121 441.0 594 50.0
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 2.6e-121 439.9 596 54.0
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 1.7e-120 437.2 597 47.7
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 3.8e-120 436.0 592 50.5
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 6.4e-120 435.3 598 48.8
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 6.4e-120 435.3 589 54.5
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 8.4e-120 434.9 599 54.1
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 1.1e-119 434.5 592 52.9
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 1.4e-119 434.1 600 51.7
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 5.5e-119 432.2 599 53.8
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 1.2e-118 431.0 602 54.2
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 1.6e-118 430.6 605 52.2
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 1.6e-118 430.6 601 49.6
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 2.1e-118 430.3 592 48.5
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.7e-118 429.9 601 53.1
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 3.5e-118 429.5 590 51.2
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 7.9e-118 428.3 601 53.2
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 2.3e-117 426.8 590 47.3
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 6.7e-117 425.2 596 47.0
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 6.7e-117 425.2 590 50.8
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.1e-116 424.5 583 50.9
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 1.5e-116 424.1 584 52.1
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 4.3e-116 422.5 604 50.3
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 5.6e-116 422.2 604 46.5
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 5.6e-116 422.2 594 47.3
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 7.4e-116 421.8 596 46.3
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 9.6e-116 421.4 590 54.4
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 1.6e-115 420.6 598 43.3
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 3.7e-115 419.5 588 49.1
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 4.8e-115 419.1 597 52.8
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 3.1e-114 416.4 586 48.3
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 9.0e-114 414.8 596 53.4
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 2.0e-113 413.7 597 48.1
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 2.6e-113 413.3 577 54.2
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 1.3e-112 411.0 596 48.0
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 1.3e-112 411.0 598 53.5
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 2.2e-112 410.2 582 50.3
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 3.8e-112 409.5 651 44.4
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 9.3e-111 404.8 605 47.9
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 1.6e-110 404.1 579 50.4
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 4.6e-110 402.5 596 51.3
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 1.3e-109 401.0 621 48.8
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 2.3e-109 400.2 600 50.2
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 2.5e-108 396.7 584 49.3
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 5.7e-108 395.6 598 51.8
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 7.4e-108 395.2 559 47.2
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 9.7e-108 394.8 587 49.9
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 4.8e-107 392.5 446 50.9
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 3.1e-106 389.8 440 51.4
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 1.5e-105 387.5 603 43.6
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 1.1e-103 381.3 617 47.3
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.9e-103 380.6 566 47.9
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 8.8e-101 371.7 602 47.2
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 1.5e-100 370.9 574 48.8
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 4.3e-100 369.4 554 54.3
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 6.3e-99 365.5 437 49.9
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.1e-98 364.8 437 49.7
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 5.3e-98 362.5 602 48.0
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 6.9e-98 362.1 434 48.4
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 1.3e-96 357.8 434 47.9
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 1.7e-96 357.5 435 47.8
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 3.8e-96 356.3 434 47.5
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 1.4e-95 354.4 439 47.8
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 3.6e-94 349.7 586 44.7
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 6.7e-93 345.5 434 47.2
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 9.7e-92 341.7 571 40.6
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.5e-89 334.3 439 45.1
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 7.7e-89 332.0 433 46.0
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 5.0e-88 329.3 412 46.1
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 1.4e-87 327.8 432 45.8
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 1.4e-87 327.8 432 45.8
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 9.4e-87 325.1 282 59.2
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 2.1e-86 323.9 417 45.1
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 6.1e-86 322.4 618 39.2
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 1.2e-81 308.1 437 42.6
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 2.7e-73 280.4 280 53.9
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 3.2e-71 273.5 417 41.5
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 2.6e-68 263.8 590 40.8
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 5.5e-63 246.1 447 35.1
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 8.0e-62 242.3 226 59.7
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 1.8e-61 241.1 605 39.5
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 6.8e-61 239.2 435 38.6
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 2.3e-37 161.0 472 29.9
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.1e-31 142.1 219 40.6
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 8.1e-30 136.0 217 38.7
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 3.1e-21 107.5 331 31.4
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 5.3e-21 106.7 167 42.5
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 1.9e-18 98.2 230 30.0
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 1.2e-17 95.5 294 27.9
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 2.5e-15 87.8 188 59.6
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 7.1e-10 69.7 59 57.6


User provided reference genes

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