Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.1e-73 277.3 134 100.0
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.1e-53 210.3 134 75.4
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 8.8e-48 193.7 134 74.6
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 8.3e-30 134.0 124 51.6
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 1.6e-25 119.8 134 43.3
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 8.1e-25 117.5 135 43.7
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 1.8e-24 116.3 134 44.8
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 8.9e-24 114.0 134 43.3
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 2.0e-23 112.8 128 43.8
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 2.6e-23 112.5 134 41.8
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.4e-23 112.1 132 38.6
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 4.4e-23 111.7 129 45.7
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 9.8e-23 110.5 136 43.4
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 1.3e-22 110.2 128 43.0
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 2.2e-22 109.4 115 44.3
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.2e-22 109.4 118 44.1
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 2.9e-22 109.0 122 45.1
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 2.9e-22 109.0 131 42.0
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 6.4e-22 107.8 130 42.3
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 6.4e-22 107.8 130 42.3
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 8.3e-22 107.5 134 38.8
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 8.3e-22 107.5 122 44.3
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 1.1e-21 107.1 128 41.4
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.4e-21 106.7 125 42.4
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.4e-21 106.7 94 55.3
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.4e-21 106.7 132 40.2
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 1.4e-21 106.7 135 42.2
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.9e-21 106.3 115 45.2
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.9e-21 106.3 115 45.2
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 1.9e-21 106.3 128 41.4
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.9e-21 106.3 128 43.0
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 4.1e-21 105.1 110 47.3
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 5.4e-21 104.8 124 39.5
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 5.4e-21 104.8 132 39.4
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 9.2e-21 104.0 129 40.3
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 9.2e-21 104.0 126 42.1
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 9.2e-21 104.0 115 44.3
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 9.2e-21 104.0 110 45.5
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 1.2e-20 103.6 115 43.5
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.6e-20 103.2 135 40.0
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.1e-20 102.8 124 42.7
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 2.7e-20 102.4 134 38.8
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 2.7e-20 102.4 126 41.3
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 7.8e-20 100.9 121 39.7
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 7.8e-20 100.9 115 42.6
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 1.0e-19 100.5 128 42.2
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 1.0e-19 100.5 133 41.4
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 1.0e-19 100.5 136 41.2
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 1.3e-19 100.1 110 44.5
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.3e-19 100.1 125 38.4
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 1.7e-19 99.8 110 45.5
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 1.7e-19 99.8 128 42.2
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 1.7e-19 99.8 125 36.8
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 1.7e-19 99.8 113 46.0
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 8.6e-19 97.4 123 42.3
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 1.1e-18 97.1 126 38.1
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.5e-18 96.7 130 40.8
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 1.5e-18 96.7 130 40.8
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.5e-18 96.7 116 42.2
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.9e-18 96.3 118 42.4
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.9e-18 96.3 109 42.2
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.3e-18 95.5 119 43.7
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.3e-18 95.5 119 43.7
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 5.6e-18 94.7 115 41.7
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 7.3e-18 94.4 118 38.1
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 1.6e-17 93.2 119 37.8
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.1e-17 92.8 124 37.9
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 2.8e-17 92.4 100 46.0
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 2.8e-17 92.4 137 35.8
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 3.6e-17 92.0 116 41.4
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 4.7e-17 91.7 122 35.2
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.7e-17 91.7 124 40.3
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 6.2e-17 91.3 112 42.0
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 8.1e-17 90.9 116 42.2
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.1e-16 90.5 109 41.3
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.4e-16 90.1 135 38.5
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 1.8e-16 89.7 111 37.8
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.3e-16 89.4 108 40.7
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.3e-16 89.4 112 38.4
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 3.1e-16 89.0 120 36.7
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 5.2e-16 88.2 113 38.9
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.8e-16 87.8 114 41.2
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.8e-16 87.8 132 38.6
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 8.9e-16 87.4 114 39.5
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.5e-15 86.7 111 37.8
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.4e-15 85.1 109 36.7
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 4.4e-15 85.1 132 34.1
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.8e-15 84.7 100 44.0
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 7.6e-15 84.3 113 38.1
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 9.9e-15 84.0 122 36.9
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 1.7e-14 83.2 130 37.7
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.7e-14 83.2 122 37.7
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 2.2e-14 82.8 109 39.4
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.7e-14 82.0 132 31.8
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.4e-14 81.3 111 35.1
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 1.1e-13 80.5 108 37.0
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 7.1e-13 77.8 124 33.1
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.2e-13 77.4 112 34.8
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 6.0e-12 74.7 112 35.7
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 6.0e-12 74.7 112 35.7
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.0e-11 73.9 102 36.3
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 1.0e-11 73.9 120 36.7
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 2.3e-11 72.8 103 35.9
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.9e-11 72.0 102 35.3
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.6e-11 71.2 92 37.0
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 1.5e-10 70.1 132 37.1
AagrBONN_evm.TU.Sc2ySwM_344.1663 Anthoceros agrestis HOM05D006839 ORTHO05D007872 2.8e-09 65.9 112 33.9
SEGI_14968 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 2.4e-08 62.8 125 31.2
TWI73G0617 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 2.4e-08 62.8 133 31.6
PGR031G2486 Punica granatum HOM05D023640 ORTHO05D019592 3.4e-07 58.9 116 35.3
AagrBONN_evm.TU.Sc2ySwM_344.1627 Anthoceros agrestis HOM05D032606 ORTHO05D007872 4.4e-07 58.5 111 33.3
Solyc01g091040.3 Solanum lycopersicum HOM05D000655 ORTHO05D001166 4.4e-07 58.5 101 37.6
PGSC0003DMG400029246 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.7e-06 56.6 65 41.5
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 2.2e-06 56.2 113 31.9
TAR388G0002 Trochodendron aralioides HOM05D000655 ORTHO05D001166 2.2e-06 56.2 105 34.3
TAR629G0172 Trochodendron aralioides HOM05D000655 ORTHO05D001166 2.2e-06 56.2 105 34.3
Ca_06870_v3 Cicer arietinum L. HOM05D000655 ORTHO05D001166 2.9e-06 55.8 136 30.1
PGR005G0005 Punica granatum HOM05D023640 ORTHO05D019592 2.9e-06 55.8 71 39.4
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 4.9e-06 55.1 55 45.5
PGR031G1100 Punica granatum HOM05D023640 ORTHO05D007872 8.4e-06 54.3 125 31.2
PGR142G2171 Punica granatum HOM05D023640 ORTHO05D019592 8.4e-06 54.3 71 38.0
GSVIVG01027651001 Vitis vinifera HOM05D000655 ORTHO05D001166 8.4e-06 54.3 105 33.3


User provided reference genes

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