Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.9e-136 489.2 255 100.0
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.9e-97 358.6 214 90.7
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 2.4e-41 173.3 218 54.6
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 2.9e-39 166.4 220 54.1
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 1.4e-38 164.1 206 56.8
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 2.3e-36 156.8 223 51.6
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.0e-36 156.4 98 83.7
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 1.5e-35 154.1 217 52.5
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 5.6e-35 152.1 109 76.1
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 9.6e-35 151.4 216 52.3
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 1.4e-33 147.5 204 54.9
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.4e-33 147.5 195 54.4
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 6.9e-33 145.2 195 52.8
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 9.0e-33 144.8 220 49.5
Eucgr.A02428 Eucalyptus grandis HOM05D006245 ORTHO05D007260 4.4e-32 142.5 84 89.3
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 5.8e-32 142.1 204 51.5
Eucgr.B00488 Eucalyptus grandis HOM05D002094 ORTHO05D002113 9.9e-32 141.4 85 87.1
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 2.9e-31 139.8 204 49.5
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 2.9e-31 139.8 218 47.7
Eucgr.B00489 Eucalyptus grandis HOM05D002094 ORTHO05D007260 2.9e-31 139.8 109 73.4
Eucgr.C00650 Eucalyptus grandis HOM05D002094 ORTHO05D007260 2.9e-31 139.8 109 73.4
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 8.4e-31 138.3 214 47.2
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 8.4e-31 138.3 200 50.0
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 1.1e-30 137.9 225 48.4
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.2e-30 136.0 220 47.3
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 7.1e-30 135.2 170 55.9
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 7.1e-30 135.2 211 48.8
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 3.5e-29 132.9 217 46.5
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.5e-29 132.9 220 46.4
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 6.0e-29 132.1 206 50.5
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.3e-28 131.0 219 45.7
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 1.3e-28 131.0 200 48.0
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 6.6e-28 128.6 200 49.0
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 8.7e-28 128.3 203 50.2
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 8.7e-28 128.3 190 49.5
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 1.5e-27 127.5 220 47.3
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.5e-27 127.5 215 47.4
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 1.5e-27 127.5 204 49.5
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 1.5e-27 127.5 154 57.8
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 2.5e-27 126.7 215 47.0
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 9.6e-27 124.8 206 49.5
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 9.6e-27 124.8 219 45.7
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 1.3e-26 124.4 191 47.6
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.3e-26 124.4 202 50.0
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 3.6e-26 122.9 203 46.3
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 4.8e-26 122.5 220 45.9
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 8.1e-26 121.7 224 46.0
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 1.1e-25 121.3 228 42.5
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 3.1e-25 119.8 132 59.8
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 3.1e-25 119.8 177 51.4
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 3.1e-25 119.8 184 47.8
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 6.9e-25 118.6 138 58.7
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 6.9e-25 118.6 209 45.9
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 9.0e-25 118.2 218 44.5
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 9.0e-25 118.2 209 45.9
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 9.0e-25 118.2 217 47.9
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 9.0e-25 118.2 190 48.4
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 9.0e-25 118.2 207 44.9
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 9.9e-24 114.8 174 48.3
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 1.3e-23 114.4 172 51.2
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 1.3e-23 114.4 214 45.3
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.3e-23 114.4 214 45.3
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 2.2e-23 113.6 269 40.9
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 2.9e-23 113.2 214 45.3
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 2.9e-23 113.2 165 47.9
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 3.8e-23 112.8 120 60.0
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 4.9e-23 112.5 129 60.5
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 1.9e-22 110.5 199 46.2
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 2.4e-22 110.2 240 41.2
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 3.2e-22 109.8 216 45.4
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 1.6e-21 107.5 183 46.4
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 1.6e-21 107.5 207 44.4
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 2.7e-21 106.7 216 44.9
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 2.7e-21 106.7 172 45.3
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 6.0e-21 105.5 165 49.1
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 6.0e-21 105.5 210 43.3
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 1.0e-20 104.8 78 75.6
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 1.3e-20 104.4 203 43.8
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 1.3e-20 104.4 171 49.7
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 2.3e-20 103.6 164 43.9
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 3.0e-20 103.2 136 51.5
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 3.9e-20 102.8 174 44.8
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 3.9e-20 102.8 174 44.8
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 3.9e-20 102.8 174 44.8
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 5.1e-20 102.4 177 42.9
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.9e-19 100.5 229 39.7
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 4.3e-19 99.4 107 58.9
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 4.3e-19 99.4 178 44.9
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 4.3e-19 99.4 178 44.9
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 5.6e-19 99.0 172 44.2
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 7.4e-19 98.6 153 48.4
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 1.3e-18 97.8 177 43.5
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 1.3e-18 97.8 187 43.9
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 1.3e-18 97.8 164 45.7
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 1.6e-18 97.4 176 42.6
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 2.1e-18 97.1 161 47.2
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 2.8e-18 96.7 156 47.4
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.7e-18 96.3 118 55.1
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 3.7e-18 96.3 207 42.5
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 6.2e-18 95.5 86 66.3
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 1.8e-17 94.0 159 45.3
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 2.4e-17 93.6 152 46.7
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 5.3e-17 92.4 186 41.9
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 5.3e-17 92.4 193 42.5
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 9.0e-17 91.7 128 52.3
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.5e-16 90.9 174 46.0
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 1.5e-16 90.9 175 45.1
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 2.0e-16 90.5 96 58.3
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 2.6e-16 90.1 141 47.5
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 2.6e-16 90.1 188 42.6
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 7.6e-16 88.6 159 46.5
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 1.0e-15 88.2 184 41.3
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 2.9e-15 86.7 201 41.8
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 2.9e-15 86.7 178 39.9
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 2.9e-15 86.7 158 45.6
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.9e-15 85.9 59 74.6
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 8.4e-15 85.1 117 54.7
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 4.2e-14 82.8 188 39.4
Eucgr.I00119 Eucalyptus grandis HOM05D003680 ORTHO05D004264 1.8e-12 77.4 123 47.2
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.9e-11 73.9 49 75.5
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.8e-10 69.3 98 46.9
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 4.1e-09 66.2 57 66.7
AagrBONN_evm.TU.Sc2ySwM_228.1662 Anthoceros agrestis HOM05D015270 ORTHO05D016504 9.0e-09 65.1 179 38.0
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 2.6e-08 63.5 86 52.3
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 1.7e-07 60.8 39 71.8
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 1.4e-06 57.8 99 47.5


User provided reference genes

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