Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 2.7e-71 271.9 142 100.0
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 3.1e-35 152.1 151 57.6
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 7.2e-32 141.0 145 53.1
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 2.1e-31 139.4 152 53.3
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 2.1e-31 139.4 149 52.3
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 4.7e-31 138.3 149 52.3
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 1.2e-29 133.7 145 53.1
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 9.7e-29 130.6 161 48.4
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 3.7e-28 128.6 152 52.0
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 6.3e-28 127.9 151 52.3
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 2.4e-27 125.9 151 45.7
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 3.1e-27 125.6 153 45.8
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 3.5e-26 122.1 148 45.9
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.0e-25 120.6 154 48.7
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 1.7e-25 119.8 142 45.8
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 2.2e-25 119.4 154 45.5
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 3.8e-25 118.6 147 46.9
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 5.0e-25 118.2 154 48.1
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 6.5e-25 117.9 148 47.3
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 1.1e-24 117.1 155 46.5
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 1.5e-24 116.7 152 49.3
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 1.5e-24 116.7 150 44.7
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.9e-24 116.3 154 47.4
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 2.5e-24 115.9 139 48.9
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 4.2e-24 115.2 142 45.8
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 4.2e-24 115.2 142 45.8
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 5.5e-24 114.8 147 44.9
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 1.6e-23 113.2 150 43.3
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 2.1e-23 112.8 142 44.4
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 2.7e-23 112.5 148 45.9
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 3.6e-23 112.1 154 43.5
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 4.7e-23 111.7 146 43.8
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 6.1e-23 111.3 140 42.9
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 8.0e-23 110.9 151 45.7
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 8.0e-23 110.9 147 46.9
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 1.0e-22 110.5 141 43.3
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 1.0e-22 110.5 147 46.9
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 1.4e-22 110.2 146 43.8
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 1.4e-22 110.2 141 43.3
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 1.4e-22 110.2 141 43.3
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 1.4e-22 110.2 141 43.3
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 1.8e-22 109.8 141 43.3
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 2.3e-22 109.4 135 48.1
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 3.0e-22 109.0 146 45.9
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 3.0e-22 109.0 151 45.0
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 5.2e-22 108.2 150 45.3
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 8.8e-22 107.5 141 42.6
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 8.8e-22 107.5 141 42.6
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 8.8e-22 107.5 141 42.6
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 8.8e-22 107.5 147 43.5
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 1.2e-21 107.1 141 41.8
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 1.2e-21 107.1 150 43.3
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 1.5e-21 106.7 152 45.4
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 2.6e-21 105.9 152 44.7
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 3.4e-21 105.5 150 41.3
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 5.7e-21 104.8 138 42.8
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 9.8e-21 104.0 149 45.0
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 1.3e-20 103.6 147 41.5
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 1.7e-20 103.2 145 46.2
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 2.8e-20 102.4 151 40.4
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 3.7e-20 102.1 144 41.0
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 4.8e-20 101.7 146 41.1
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 1.4e-19 100.1 147 42.9
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 1.4e-19 100.1 146 42.5
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 1.4e-19 100.1 146 42.5
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 1.4e-19 100.1 152 43.4
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 1.8e-19 99.8 145 42.1
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 2.4e-19 99.4 148 42.6
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 3.1e-19 99.0 152 44.1
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 5.4e-19 98.2 146 42.5
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 7.0e-19 97.8 146 40.4
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 9.1e-19 97.4 145 42.1
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 1.6e-18 96.7 140 38.6
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 1.6e-18 96.7 148 43.2
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 3.8e-17 92.0 148 39.2
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 1.1e-16 90.5 151 43.0
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 1.1e-16 90.5 152 42.1
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 1.9e-16 89.7 148 45.9
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 4.2e-16 88.6 142 38.7
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 5.5e-16 88.2 142 36.6
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 5.5e-16 88.2 140 39.3
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 3.0e-14 82.4 133 39.8
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 3.0e-14 82.4 160 36.2
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 6.8e-14 81.3 147 40.8
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 5.7e-13 78.2 140 37.1
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 9.8e-13 77.4 135 39.3
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 9.8e-13 77.4 140 35.7
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 3.7e-12 75.5 140 37.9
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 1.8e-11 73.2 140 38.6
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 2.7e-10 69.3 111 45.9
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 7.8e-10 67.8 69 58.0
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 1.0e-09 67.4 145 42.8
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.0e-09 67.4 117 38.5
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 1.7e-09 66.6 120 39.2
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 5.6e-08 61.6 103 37.9
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 2.1e-07 59.7 127 38.6
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 8.0e-07 57.8 144 34.0


User provided reference genes

Program Settings