Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02057 Eucalyptus grandis HOM05D000891 ORTHO05D000761 3.5e-57 225.3 173 100.0
CSS0040738 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 4.7e-33 145.2 184 59.2
Eucgr.E04085 Eucalyptus grandis HOM05D000891 ORTHO05D000761 8.2e-30 134.4 127 81.1
CsaV3_1G010890 Cucumis sativus L. HOM05D000891 ORTHO05D000761 1.1e-26 124.0 181 66.3
CSS0036990 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 1.0e-24 117.5 184 53.8
Sabra11G0000300 Salix brachista HOM05D000891 ORTHO05D000761 2.3e-24 116.3 183 57.9
TWI38G0441 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 2.3e-24 116.3 182 68.1
Medtr2g022860 Medicago truncatula HOM05D000891 ORTHO05D000761 6.7e-24 114.8 179 54.7
Psat1g181920 Pisum sativum HOM05D000891 ORTHO05D000761 6.7e-24 114.8 181 59.1
TAR629G1624 Trochodendron aralioides HOM05D000891 ORTHO05D000761 1.8e-21 106.7 182 64.8
C04p27830 Brassica napus HOM05D000891 ORTHO05D026225 2.4e-21 106.3 179 37.4
BolC4t24326H Brassica oleracea HOM05D000891 ORTHO05D026225 2.4e-21 106.3 179 37.4
TPR.G7638 Trifolium pratense HOM05D000891 ORTHO05D000761 5.3e-21 105.1 179 56.4
TAR626G1079 Trochodendron aralioides HOM05D000891 ORTHO05D000761 2.0e-20 103.2 182 65.4
Haze_06789 Corylus avellana HOM05D000891 ORTHO05D000761 5.0e-19 98.6 182 62.1
Ca_00621_v3 Cicer arietinum L. HOM05D000891 ORTHO05D000761 8.5e-19 97.8 179 57.0
CARHR011930 Cardamine hirsuta HOM05D000891 ORTHO05D000761 1.5e-18 97.1 180 57.8
C05p09760 Brassica napus HOM05D000891 ORTHO05D000761 6.1e-17 91.7 182 56.0
BolC5t29717H Brassica oleracea HOM05D000891 ORTHO05D000761 1.0e-16 90.9 182 56.0
Potri.011G001100 Populus trichocarpa HOM05D000891 ORTHO05D000761 1.4e-16 90.5 183 58.5
Cc09_g01890 Coffea canephora HOM05D000891 ORTHO05D000761 1.8e-16 90.1 177 56.5
TWI63G1417 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 2.3e-16 89.7 183 62.3
BcaC05g25031 Brassica carinata HOM05D000891 ORTHO05D000761 8.8e-16 87.8 182 55.5
Potri.004G018000 Populus trichocarpa HOM05D000891 ORTHO05D000761 1.2e-15 87.4 183 58.5
ClCG03G004860 Citrullus lanatus HOM05D000891 ORTHO05D000761 2.0e-15 86.7 180 62.2
AL1G22760 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 9.8e-15 84.3 54 70.4
THA.LOC104809510 Tarenaya hassleriana HOM05D000891 ORTHO05D000761 1.3e-14 84.0 54 74.1
Eucgr.L02848 Eucalyptus grandis HOM05D000891 ORTHO05D000761 2.2e-14 83.2 45 91.1
Lj1P1228T67 Lonicera japonica HOM05D000891 ORTHO05D000761 3.7e-14 82.4 54 66.7
Thecc.06G217800 Theobroma cacao HOM05D000891 ORTHO05D000761 4.8e-14 82.0 54 68.5
CARHR050450 Cardamine hirsuta HOM05D000891 ORTHO05D000761 6.3e-14 81.6 52 69.2
Sp1g10240 Schrenkiella parvula HOM05D000891 ORTHO05D000761 6.3e-14 81.6 54 70.4
MSTRG.14642 Avicennia marina HOM05D000891 ORTHO05D000761 1.1e-13 80.9 54 70.4
Sed0018063 Sechium edule HOM05D000891 ORTHO05D000761 1.1e-13 80.9 54 66.7
Nitab4.5_0002155g0070 Nicotiana tabacum HOM05D000891 ORTHO05D000761 1.8e-13 80.1 54 63.0
Actinidia26936 Actinidia chinensis HOM05D000891 ORTHO05D000761 2.4e-13 79.7 54 66.7
Cfa000246 Carpinus fangiana HOM05D000891 ORTHO05D000761 2.4e-13 79.7 182 57.7
Migut.H01561 Erythranthe guttata HOM05D000891 ORTHO05D000761 2.4e-13 79.7 54 64.8
Nitab4.5_0007448g0010 Nicotiana tabacum HOM05D000891 ORTHO05D000761 2.4e-13 79.7 54 63.0
CANSAT56G0821 Cannabis sativa HOM05D000891 ORTHO05D000761 3.1e-13 79.3 54 66.7
Nn1g07110 Nelumbo nucifera HOM05D000891 ORTHO05D000761 3.1e-13 79.3 54 63.0
Gohir.A09G069200 Gossypium hirsutum HOM05D000891 ORTHO05D000761 4.1e-13 79.0 54 64.8
Gohir.D10G013900 Gossypium hirsutum HOM05D000891 ORTHO05D000761 4.1e-13 79.0 51 68.6
Gorai.011G015700 Gossypium raimondii HOM05D000891 ORTHO05D000761 4.1e-13 79.0 51 68.6
BcaC04g22358 Brassica carinata HOM05D000891 ORTHO05D000761 7.0e-13 78.2 54 66.7
Lj6g0026353 Lotus japonicus HOM05D000891 ORTHO05D000761 7.0e-13 78.2 163 62.6
AT1G11630 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 1.6e-12 77.0 52 67.3
Migut.H01563 Erythranthe guttata HOM05D000891 ORTHO05D000761 2.7e-12 76.3 51 64.7
Sopen10g001270 Solanum pennellii HOM05D000891 ORTHO05D000761 2.7e-12 76.3 52 63.5
Eucgr.E04080 Eucalyptus grandis HOM05D000891 ORTHO05D000761 4.5e-12 75.5 41 87.8
PSO063G4130 Papaver somniferum HOM05D000891 ORTHO05D000761 4.5e-12 75.5 54 63.0
Sabra04G0009800 Salix brachista HOM05D000891 ORTHO05D000761 4.5e-12 75.5 183 56.3
BcaC02g10532 Brassica carinata HOM05D000134 ORTHO05D026225 5.9e-12 75.1 159 33.3
Hma1.2p1_0813F.1_g222620 Hydrangea macrophylla HOM05D000891 ORTHO05D000761 5.9e-12 75.1 182 58.8
MD05G1343300 Malus domestica HOM05D000891 ORTHO05D000761 5.9e-12 75.1 54 64.8
BcaNung04805 Brassica carinata HOM05D000891 ORTHO05D000761 7.7e-12 74.7 54 63.0
Thhalv10007792m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 7.7e-12 74.7 52 61.5
Migut.H01562 Erythranthe guttata HOM05D000891 ORTHO05D000761 1.0e-11 74.3 54 55.6
Eucgr.E04079 Eucalyptus grandis HOM05D000891 ORTHO05D000761 1.0e-11 74.3 40 90.0
GSVIVG01004801001 Vitis vinifera HOM05D000891 ORTHO05D000761 1.0e-11 74.3 45 75.6
EL10Ac8g20024 Beta vulgaris HOM05D000891 ORTHO05D000761 1.3e-11 73.9 54 63.0
Duzib235G0743 Durio zibethinus HOM05D000891 ORTHO05D000761 1.7e-11 73.6 54 63.0
CDE12G0148 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 2.9e-11 72.8 181 29.3
COL.COLO4_31729 Corchorus olitorius HOM05D000891 ORTHO05D000761 2.9e-11 72.8 52 63.5
Hund23485 Selenicereus undatus HOM05D000891 ORTHO05D000761 2.9e-11 72.8 54 59.3
Gorai.004G069000 Gossypium raimondii HOM05D000891 ORTHO05D000761 3.8e-11 72.4 51 64.7
Oeu033890.1 Olea europaea HOM05D000891 ORTHO05D000761 3.8e-11 72.4 51 66.7
Thhalv10023498m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 5.0e-11 72.0 49 67.3
Dinv13875 Davidia involucrata HOM05D000891 ORTHO05D000761 1.1e-10 70.9 49 61.2
COL.COLO4_31747 Corchorus olitorius HOM05D000891 ORTHO05D000761 1.9e-10 70.1 52 61.5
Sc05g0009060 Simmondsia chinensis HOM05D000891 ORTHO05D000761 1.9e-10 70.1 54 57.4
A06p08200 Brassica napus HOM05D000891 ORTHO05D000761 2.5e-10 69.7 52 61.5
BraA06t24020Z Brassica rapa HOM05D000891 ORTHO05D000761 2.5e-10 69.7 52 61.5
SGA_v2.0_scaffold7G03868 Striga asiatica HOM05D000891 ORTHO05D000761 2.5e-10 69.7 51 62.7
Aqoxy1G03290 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 3.2e-10 69.3 54 57.4
AL2G14180 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 3.2e-10 69.3 45 71.1
SGA_v2.0_scaffold89G27459 Striga asiatica HOM05D000891 ORTHO05D000761 3.2e-10 69.3 54 57.4
Ciclev10015461m.g Citrus clementina HOM05D000891 ORTHO05D000761 4.2e-10 68.9 53 56.6
CAN.G105.16 Capsicum annuum HOM05D000891 ORTHO05D000761 5.5e-10 68.6 48 62.5
Peaxi162Scf00203g00126 Petunia axillaris HOM05D000891 ORTHO05D000761 5.5e-10 68.6 48 62.5
PGR042G1315 Punica granatum HOM05D000891 ORTHO05D000761 5.5e-10 68.6 49 63.3
AUR62021977 Chenopodium quinoa HOM05D000891 ORTHO05D000761 7.2e-10 68.2 54 57.4
Medtr6g047970 Medicago truncatula HOM05D000891 ORTHO05D000761 7.2e-10 68.2 179 25.1
Solyc10g005280.1 Solanum lycopersicum HOM05D000891 ORTHO05D000761 7.2e-10 68.2 49 61.2
Prupe.4G023500 Prunus persica HOM05D000891 ORTHO05D000761 9.4e-10 67.8 48 66.7
MSTRG.7228 Avicennia marina HOM05D000891 ORTHO05D000761 1.6e-09 67.0 50 60.0
Cpa.g.sc198.30 Carica papaya HOM05D000891 ORTHO05D000761 1.6e-09 67.0 48 62.5
FvH4_3g02370 Fragaria vesca HOM05D000891 ORTHO05D000761 2.1e-09 66.6 54 59.3
FAN25G3562 Fragaria x ananassa HOM05D000891 ORTHO05D000761 2.1e-09 66.6 54 59.3
SalBow8G1993 Salvia bowleyana HOM05D000891 ORTHO05D000761 2.1e-09 66.6 183 27.9
AUR62012679 Chenopodium quinoa HOM05D000891 ORTHO05D000761 2.7e-09 66.2 54 55.6
MD10G1318400 Malus domestica HOM05D000891 ORTHO05D000761 3.6e-09 65.9 48 66.7
PGSC0003DMG400011285 Solanum tuberosum HOM05D000891 ORTHO05D000761 3.6e-09 65.9 48 60.4
Aa31LG2G8960 Aethionema arabicum HOM05D000891 ORTHO05D000761 6.1e-09 65.1 49 59.2
arahy.Tifrunner.gnm1.ann1.13GHM6 Arachis hypogaea HOM05D000891 ORTHO05D000761 8.0e-09 64.7 68 48.5
arahy.Tifrunner.gnm1.ann1.305IG9 Arachis hypogaea HOM05D000891 ORTHO05D000761 8.0e-09 64.7 68 48.5
DCAR_004206 Daucus carota HOM05D000891 ORTHO05D000761 1.0e-08 64.3 53 50.9
Glyma.13G206100 Glycine max HOM05D000891 ORTHO05D000761 1.0e-08 64.3 50 56.0
Gohir.D09G069100 Gossypium hirsutum HOM05D000891 ORTHO05D000761 1.0e-08 64.3 45 64.4
Gorai.006G083300 Gossypium raimondii HOM05D000891 ORTHO05D000761 1.0e-08 64.3 45 64.4
Phvul.006G150800 Phaseolus vulgaris HOM05D000891 ORTHO05D000761 1.0e-08 64.3 74 43.2
BcaC06g31872 Brassica carinata HOM05D000891 ORTHO05D000761 1.4e-08 63.9 182 57.1
Manes.16G009800 Manihot esculenta HOM05D000891 ORTHO05D000761 1.4e-08 63.9 47 61.7
RcHm_v2.0_Chr4g0403291 Rosa chinensis HOM05D000891 ORTHO05D000761 1.8e-08 63.5 54 59.3
Ciclev10015479m.g Citrus clementina HOM05D000891 ORTHO05D000761 2.3e-08 63.2 45 62.2
CsaV3_3G041130 Cucumis sativus L. HOM05D000891 ORTHO05D011021 3.0e-08 62.8 150 27.3
HPP92_018469 Vanilla planifolia HOM05D000891 ORTHO05D000761 3.0e-08 62.8 51 47.1
CDE02G2552 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 4.0e-08 62.4 54 48.1
QL05p074007 Quercus lobata HOM05D000891 ORTHO05D000761 1.5e-07 60.5 38 63.2
RcHm_v2.0_Chr5g0003601 Rosa chinensis HOM05D000891 ORTHO05D000761 1.5e-07 60.5 49 61.2
MBI02_g28329_MAGBIO Magnolia biondii HOM05D000891 ORTHO05D000761 5.7e-07 58.5 51 52.9
Lalb_Chr15g0087451 Lupinus albus HOM05D000891 ORTHO05D000761 7.5e-07 58.2 64 46.9
Lalb_Chr18g0056251 Lupinus albus HOM05D000891 ORTHO05D000761 1.3e-06 57.4 76 42.1
MBI02_g28331_MAGBIO Magnolia biondii HOM05D000891 ORTHO05D000761 1.3e-06 57.4 53 47.2
Ah.14g088070 Amaranthus hybridus HOM05D000891 ORTHO05D000761 1.7e-06 57.0 45 57.8
ATR0752G205 Amborella trichopoda HOM05D000891 ORTHO05D000761 2.2e-06 56.6 47 51.1
ClCG10G015370 Citrullus lanatus HOM05D000891 ORTHO05D011021 2.8e-06 56.2 149 45.0
Cfa021121 Carpinus fangiana HOM05D000891 ORTHO05D000761 3.7e-06 55.8 37 62.2
Rhsim13G0156100 Rhododendron simsii HOM05D000891 ORTHO05D000761 3.7e-06 55.8 38 55.3
Hund21396 Selenicereus undatus HOM05D000891 ORTHO05D000761 3.7e-06 55.8 51 49.0
Carub.0002s0317 Capsella rubella HOM05D000891 ORTHO05D000761 8.3e-06 54.7 34 70.6
Sp2g02670 Schrenkiella parvula HOM05D000891 ORTHO05D000761 8.3e-06 54.7 34 67.6


User provided reference genes

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