Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02043 Eucalyptus grandis HOM05D004666 ORTHO05D005822 5.2e-119 431.0 212 100.0
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 3.0e-50 202.6 213 52.1
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 1.5e-49 200.3 220 53.2
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 8.2e-48 194.5 214 50.0
RhsimUnG0189100 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.8e-47 193.4 214 50.5
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 1.2e-46 190.7 206 51.5
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 1.5e-46 190.3 217 50.7
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 2.6e-46 189.5 215 51.6
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 3.8e-45 185.7 206 51.0
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 5.0e-45 185.3 211 49.8
Cpa.g.sc5.49 Carica papaya HOM05D004666 ORTHO05D005822 5.5e-44 181.8 206 46.6
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 7.2e-44 181.4 216 47.7
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 1.2e-43 180.6 212 47.6
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 3.6e-43 179.1 206 48.5
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 8.8e-42 174.5 224 46.4
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 1.8e-39 166.8 208 47.1
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 2.4e-39 166.4 210 44.3
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 3.1e-39 166.0 236 43.2
Hma1.2p1_0084F.1_g043480 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 4.1e-39 165.6 207 46.4
Hma1.2p1_2087F.1_g313760 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 7.0e-39 164.9 207 46.4
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 7.0e-39 164.9 206 46.6
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 2.6e-38 162.9 211 47.4
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 5.9e-38 161.8 243 40.7
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 5.9e-38 161.8 243 41.2
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 6.5e-37 158.3 205 46.8
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 2.5e-36 156.4 213 45.1
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 1.2e-35 154.1 247 40.1
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 2.1e-35 153.3 219 42.9
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 4.7e-35 152.1 247 38.9
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 6.1e-35 151.8 213 41.3
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 6.1e-35 151.8 244 38.9
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 8.0e-35 151.4 239 37.7
FAN14G5421 Fragaria x ananassa HOM05D004666 ORTHO05D005822 8.0e-35 151.4 239 37.7
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 1.0e-34 151.0 213 42.7
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 2.3e-34 149.8 239 39.3
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 2.3e-34 149.8 207 47.3
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 3.0e-34 149.4 238 39.1
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 3.0e-34 149.4 219 41.1
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 4.0e-34 149.1 220 41.4
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 4.0e-34 149.1 220 41.4
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.1e-33 147.5 226 39.8
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 2.0e-33 146.7 211 42.7
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 3.3e-33 146.0 213 42.3
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 3.3e-33 146.0 216 42.6
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 5.7e-33 145.2 206 44.2
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 7.5e-33 144.8 207 42.5
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 9.7e-33 144.4 234 40.2
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 9.7e-33 144.4 233 39.1
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 9.7e-33 144.4 210 45.2
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 1.3e-32 144.1 244 37.7
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 1.3e-32 144.1 205 43.4
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 1.7e-32 143.7 240 39.2
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 1.7e-32 143.7 197 40.1
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 2.8e-32 142.9 213 41.8
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 6.3e-32 141.7 213 42.7
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 6.3e-32 141.7 205 41.0
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 5.3e-31 138.7 219 40.2
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 7.0e-31 138.3 210 41.9
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 7.0e-31 138.3 217 42.4
Haze_16425 Corylus avellana HOM05D004666 ORTHO05D005822 9.1e-31 137.9 200 42.0
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 9.1e-31 137.9 212 40.6
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 1.2e-30 137.5 216 44.9
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 2.0e-30 136.7 221 40.3
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 2.0e-30 136.7 209 40.2
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 3.5e-30 136.0 223 39.9
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 3.5e-30 136.0 205 40.5
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 5.9e-30 135.2 209 44.5
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 1.0e-29 134.4 212 40.6
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 1.3e-29 134.0 215 39.5
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 3.8e-29 132.5 216 38.4
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 5.0e-29 132.1 211 39.8
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 6.5e-29 131.7 224 40.2
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 6.5e-29 131.7 330 30.0
SHI23868 Sapria himalayana HOM05D004666 ORTHO05D005822 1.9e-28 130.2 204 42.2
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 3.2e-28 129.4 213 39.0
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 4.2e-28 129.0 209 40.2
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 9.4e-28 127.9 205 39.0
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 9.4e-28 127.9 212 40.1
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 2.7e-27 126.3 206 38.8
CSS0049785 Camellia sinensis var. sinensis HOM05D004666 ORTHO05D005822 4.7e-27 125.6 117 58.1
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 6.1e-27 125.2 240 35.8
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 1.0e-26 124.4 205 38.0
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 1.0e-26 124.4 209 39.2
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 1.4e-26 124.0 220 37.3
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 1.4e-26 124.0 208 39.4
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 1.4e-26 124.0 211 41.2
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 1.8e-26 123.6 218 38.1
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 1.8e-26 123.6 210 36.2
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 2.3e-26 123.2 206 38.3
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 2.3e-26 123.2 206 38.3
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 2.3e-26 123.2 200 38.0
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 3.0e-26 122.9 211 37.0
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 4.0e-26 122.5 204 41.7
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 8.8e-26 121.3 206 38.3
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 1.5e-25 120.6 215 35.8
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 2.0e-25 120.2 214 35.5
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 7.5e-25 118.2 199 39.7
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 1.3e-24 117.5 209 36.4
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 1.7e-24 117.1 228 36.0
ATR0820G266 Amborella trichopoda HOM05D004666 ORTHO05D005822 2.8e-24 116.3 201 38.8
SEGI_32780 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 6.3e-24 115.2 225 38.7
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 1.4e-23 114.0 240 32.9
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 7.0e-23 111.7 210 36.2
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 3.5e-22 109.4 201 38.8
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 3.5e-22 109.4 198 33.3
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 3.8e-21 105.9 199 39.7
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 5.0e-21 105.5 202 38.1
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 1.2e-19 100.9 203 36.0
Sabra06G0024800 Salix brachista HOM05D004666 ORTHO05D005822 3.6e-19 99.4 199 36.7
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 8.0e-19 98.2 206 35.0
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 1.5e-17 94.0 198 32.3
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 5.7e-17 92.0 226 28.8
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 1.3e-16 90.9 218 30.3
Os02g0307300 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 1.7e-16 90.5 192 31.8
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 8.3e-16 88.2 205 32.2
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 5.4e-15 85.5 208 29.8
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 2.8e-11 73.2 88 46.6
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 5.2e-10 68.9 199 30.2
Sabra16G0037300 Salix brachista HOM05D004666 ORTHO05D017783 4.9e-08 62.4 51 58.8


User provided reference genes

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