Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01957 Eucalyptus grandis HOM05D001555 ORTHO05D191331 1.0e-91 340.1 175 100.0
Eucgr.E02517 Eucalyptus grandis HOM05D001180 ORTHO05D192859 3.3e-26 122.5 119 64.7
Eucgr.E02519 Eucalyptus grandis HOM05D001555 ORTHO05D194365 6.6e-19 98.2 67 82.1
Eucgr.F01567 Eucalyptus grandis HOM05D001555 ORTHO05D001616 1.9e-13 80.1 65 83.1
Eucgr.A02429 Eucalyptus grandis HOM05D001555 ORTHO05D035213 7.3e-10 68.2 35 85.7
Hma1.2p1_0203F.1_g086380 Hydrangea macrophylla HOM05D001555 ORTHO05D001616 8.1e-09 64.7 64 71.9
COL.COLO4_26322 Corchorus olitorius HOM05D001555 ORTHO05D001616 1.8e-08 63.5 66 72.7
Duzib093G1024 Durio zibethinus HOM05D001555 ORTHO05D001616 6.8e-08 61.6 66 71.2
Cpa.g.sc36.73 Carica papaya HOM05D001555 ORTHO05D001616 2.6e-07 59.7 66 69.7
Potri.002G260900 Populus trichocarpa HOM05D001555 ORTHO05D001616 2.6e-07 59.7 66 68.2
Solyc12g089140.2 Solanum lycopersicum HOM05D001555 ORTHO05D001616 2.6e-07 59.7 62 69.4
PGSC0003DMG400015456 Solanum tuberosum HOM05D001555 ORTHO05D001616 2.6e-07 59.7 62 69.4
Actinidia15327 Actinidia chinensis HOM05D001555 ORTHO05D001616 3.4e-07 59.3 63 73.0
GSVIVG01009705001 Vitis vinifera HOM05D001555 ORTHO05D001616 3.4e-07 59.3 65 70.8
MELO3C010938.2 Cucumis melo HOM05D001555 ORTHO05D001616 4.4e-07 58.9 65 66.2
Dinv36078 Davidia involucrata HOM05D001555 ORTHO05D001616 4.4e-07 58.9 66 68.2
Thecc.08G026300 Theobroma cacao HOM05D001555 ORTHO05D001616 4.4e-07 58.9 66 68.2
CsaV3_2G028650 Cucumis sativus L. HOM05D001555 ORTHO05D001616 9.9e-07 57.8 65 64.6
Nitab4.5_0002296g0060 Nicotiana tabacum HOM05D001555 ORTHO05D001616 9.9e-07 57.8 66 66.7
Nitab4.5_0005730g0020 Nicotiana tabacum HOM05D001555 ORTHO05D001616 9.9e-07 57.8 66 66.7
CAN.G1139.14 Capsicum annuum HOM05D001555 ORTHO05D001616 1.3e-06 57.4 66 68.2
TWI12G1279 Tripterygium wilfordii HOM05D001555 ORTHO05D001616 1.3e-06 57.4 66 66.7
Cc10_g02910 Coffea canephora HOM05D001555 ORTHO05D001616 1.7e-06 57.0 65 66.2
RcHm_v2.0_Chr6g0301001 Rosa chinensis HOM05D001555 ORTHO05D001616 1.7e-06 57.0 65 63.1
Gohir.A05G194300 Gossypium hirsutum HOM05D001555 ORTHO05D001616 2.2e-06 56.6 66 66.7
Gohir.D05G197500 Gossypium hirsutum HOM05D001555 ORTHO05D001616 2.2e-06 56.6 66 66.7
Gorai.009G202400 Gossypium raimondii HOM05D001555 ORTHO05D001616 2.2e-06 56.6 66 66.7
Phvul.001G014700 Phaseolus vulgaris HOM05D001555 ORTHO05D001616 2.2e-06 56.6 66 66.7
CSS0045078 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D001616 2.9e-06 56.2 65 69.2
Lalb_Chr24g0398971 Lupinus albus HOM05D001555 ORTHO05D001616 2.9e-06 56.2 69 59.4
TWI56G0868 Tripterygium wilfordii HOM05D001555 ORTHO05D001616 4.9e-06 55.5 65 66.2
Sopen12g031010 Solanum pennellii HOM05D001555 ORTHO05D001616 6.4e-06 55.1 63 68.3
VMungo0647G0564 Vigna mungo HOM05D001555 ORTHO05D001616 6.4e-06 55.1 66 65.2
Lsat_1_v5_gn_1_17701 Lactuca sativa HOM05D001555 ORTHO05D001616 8.4e-06 54.7 66 60.6
Manes.18G027300 Manihot esculenta HOM05D001555 ORTHO05D001616 8.4e-06 54.7 64 71.9
Prupe.1G379700 Prunus persica HOM05D001555 ORTHO05D001616 8.4e-06 54.7 66 63.6
TPR.G20166 Trifolium pratense HOM05D001555 ORTHO05D001616 8.4e-06 54.7 66 63.6


User provided reference genes

Program Settings