Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 5.8e-77 290.8 146 100.0
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 4.6e-34 148.3 142 62.7
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 5.3e-30 134.8 140 55.0
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 9.1e-30 134.0 133 57.1
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 1.2e-29 133.7 138 52.9
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 4.5e-29 131.7 140 54.3
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 5.9e-29 131.3 148 51.4
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 5.9e-29 131.3 139 52.5
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 1.0e-28 130.6 140 52.1
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.3e-28 130.2 135 51.9
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.3e-28 130.2 140 53.6
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 1.7e-28 129.8 139 51.8
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 2.2e-28 129.4 138 52.9
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 2.9e-28 129.0 145 55.2
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 8.5e-28 127.5 126 60.3
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.4e-27 126.7 130 55.4
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 1.4e-27 126.7 155 49.7
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 1.9e-27 126.3 100 66.0
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 1.9e-27 126.3 127 54.3
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 1.9e-27 126.3 102 64.7
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 2.5e-27 125.9 144 51.4
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 3.2e-27 125.6 128 53.9
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 4.2e-27 125.2 141 50.4
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 7.2e-27 124.4 95 65.3
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 7.2e-27 124.4 121 57.9
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 1.2e-26 123.6 100 64.0
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 1.2e-26 123.6 135 48.1
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.6e-26 123.2 93 68.8
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 2.7e-26 122.5 79 73.4
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 2.7e-26 122.5 138 51.4
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.7e-26 122.5 121 57.9
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 2.7e-26 122.5 121 57.9
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 3.6e-26 122.1 138 49.3
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 3.6e-26 122.1 99 59.6
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 4.7e-26 121.7 99 59.6
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 6.1e-26 121.3 99 66.7
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 6.1e-26 121.3 95 64.2
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 7.9e-26 120.9 94 63.8
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.0e-25 120.6 125 52.8
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 1.0e-25 120.6 137 54.7
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 1.8e-25 119.8 127 55.1
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 2.3e-25 119.4 132 52.3
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 2.3e-25 119.4 100 64.0
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 3.0e-25 119.0 93 65.6
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 3.0e-25 119.0 77 76.6
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 3.9e-25 118.6 94 61.7
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 3.9e-25 118.6 83 73.5
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 5.1e-25 118.2 111 61.3
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 5.1e-25 118.2 95 63.2
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 5.1e-25 118.2 97 60.8
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 8.8e-25 117.5 129 53.5
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 1.5e-24 116.7 125 50.4
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 1.5e-24 116.7 143 50.3
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 1.5e-24 116.7 136 48.5
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.5e-24 116.7 116 57.8
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 2.0e-24 116.3 78 70.5
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 2.0e-24 116.3 78 73.1
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 2.0e-24 116.3 96 61.5
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 2.6e-24 115.9 108 58.3
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 3.3e-24 115.5 96 61.5
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.3e-24 115.5 161 43.5
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 4.4e-24 115.2 164 44.5
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 4.4e-24 115.2 78 71.8
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 5.7e-24 114.8 139 51.1
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 5.7e-24 114.8 78 73.1
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 7.4e-24 114.4 78 71.8
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 7.4e-24 114.4 79 72.2
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 9.7e-24 114.0 78 71.8
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 9.7e-24 114.0 78 71.8
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 9.7e-24 114.0 78 71.8
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 9.7e-24 114.0 78 71.8
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 9.7e-24 114.0 78 71.8
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 9.7e-24 114.0 78 71.8
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.3e-23 113.6 82 69.5
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 2.8e-23 112.5 78 71.8
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 3.7e-23 112.1 80 70.0
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 3.7e-23 112.1 111 56.8
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 4.8e-23 111.7 78 69.2
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.8e-23 111.7 133 53.4
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 6.3e-23 111.3 82 69.5
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 8.2e-23 110.9 80 68.8
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 8.2e-23 110.9 78 70.5
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.1e-22 110.5 79 69.6
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 2.4e-22 109.4 83 65.1
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 4.1e-22 108.6 92 60.9
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 9.1e-22 107.5 145 45.5
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 2.0e-21 106.3 82 64.6
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 4.5e-21 105.1 132 47.0
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 1.0e-20 104.0 177 41.2
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 6.5e-20 101.3 79 60.8
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 5.5e-19 98.2 77 59.7
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 2.1e-18 96.3 80 63.8
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.3e-17 92.8 93 54.8
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 3.0e-17 92.4 55 83.6
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 5.7e-16 88.2 100 50.0
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 1.3e-15 87.0 68 63.2
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 4.8e-15 85.1 169 36.1
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 6.3e-15 84.7 54 75.9
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 8.2e-15 84.3 58 72.4
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.4e-14 82.8 59 71.2
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 3.1e-14 82.4 49 81.6
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.1e-14 82.4 49 81.6
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 3.1e-14 82.4 49 81.6
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 2.6e-13 79.3 49 77.6
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 7.7e-13 77.8 60 63.3
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 1.0e-12 77.4 54 74.1
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 2.2e-12 76.3 49 75.5
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 5.5e-11 71.6 81 45.7
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 1.2e-10 70.5 48 68.8
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 8.8e-09 64.3 51 62.7
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 5.3e-06 55.1 77 42.9


User provided reference genes

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