Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01728 Eucalyptus grandis HOM05D006265 ORTHO05D007822 1.9e-54 215.7 117 100.0
Eucgr.J01792 Eucalyptus grandis HOM05D006265 ORTHO05D007822 1.1e-41 173.3 100 92.0
Eucgr.J01795 Eucalyptus grandis HOM05D006265 ORTHO05D007822 2.3e-31 139.0 93 80.6
CiPaw.13G173200 Carya illinoinensis HOM05D006265 ORTHO05D007822 2.2e-26 122.5 103 68.0
Cfa009611 Carpinus fangiana HOM05D006265 ORTHO05D007822 1.4e-25 119.8 109 64.2
Haze_22984 Corylus avellana HOM05D006265 ORTHO05D007822 1.4e-25 119.8 105 65.7
Dinv09750 Davidia involucrata HOM05D006265 ORTHO05D007822 1.9e-25 119.4 102 64.7
Actinidia39362 Actinidia chinensis HOM05D006265 ORTHO05D007822 5.4e-25 117.9 109 62.4
CSS0049900 Camellia sinensis var. sinensis HOM05D006265 ORTHO05D007822 7.0e-25 117.5 103 66.0
PGR042G3578 Punica granatum HOM05D006265 ORTHO05D007822 7.0e-25 117.5 103 65.0
Rhsim13G0230200 Rhododendron simsii HOM05D006265 ORTHO05D007822 3.5e-24 115.2 103 63.1
GSVIVG01025406001 Vitis vinifera HOM05D006265 ORTHO05D007822 6.0e-24 114.4 108 63.0
Lj2C715T2 Lonicera japonica HOM05D006265 ORTHO05D007822 1.7e-23 112.8 87 71.3
vmacro22565 Vaccinium macrocarpon HOM05D006265 ORTHO05D007822 3.9e-23 111.7 110 60.9
vmacro04214 Vaccinium macrocarpon HOM05D006265 ORTHO05D007822 5.0e-23 111.3 110 60.9
QL01p007989 Quercus lobata HOM05D006265 ORTHO05D007822 6.6e-23 110.9 103 66.0
COL.COLO4_34991 Corchorus olitorius HOM05D006265 ORTHO05D007822 8.6e-23 110.5 105 62.9
MD03G1008800 Malus domestica HOM05D006265 ORTHO05D007822 8.6e-23 110.5 103 60.2
ClCG02G023910 Citrullus lanatus HOM05D006265 ORTHO05D007822 1.1e-22 110.2 109 56.9
MBI13_g29632_MAGBIO Magnolia biondii HOM05D006265 ORTHO05D007822 1.1e-22 110.2 110 59.1
TAR623G0845 Trochodendron aralioides HOM05D006265 ORTHO05D007822 1.5e-22 109.8 108 62.0
Nitab4.5_0011368g0010 Nicotiana tabacum HOM05D006265 ORTHO05D007822 2.5e-22 109.0 100 61.0
HPP92_025756 Vanilla planifolia HOM05D006265 ORTHO05D007822 2.5e-22 109.0 110 58.2
Gohir.A08G011700 Gossypium hirsutum HOM05D006265 ORTHO05D007822 3.3e-22 108.6 103 63.1
Manes.15G105700 Manihot esculenta HOM05D006265 ORTHO05D007822 4.3e-22 108.2 103 62.1
MD03G1009900 Malus domestica HOM05D006265 ORTHO05D007822 7.3e-22 107.5 87 67.8
Sc16g0012050 Simmondsia chinensis HOM05D006265 ORTHO05D007822 7.3e-22 107.5 110 57.3
CsaV3_4G023450 Cucumis sativus L. HOM05D006265 ORTHO05D007822 1.2e-21 106.7 110 56.4
Gohir.D08G022200 Gossypium hirsutum HOM05D006265 ORTHO05D007822 1.2e-21 106.7 103 62.1
Gorai.004G017500 Gossypium raimondii HOM05D006265 ORTHO05D007822 1.2e-21 106.7 103 62.1
MELO3C014671.2 Cucumis melo HOM05D006265 ORTHO05D007822 1.6e-21 106.3 110 55.5
Lsat_1_v5_gn_6_52400 Lactuca sativa HOM05D006265 ORTHO05D007822 1.6e-21 106.3 86 67.4
Duzib168G1214 Durio zibethinus HOM05D006265 ORTHO05D007822 2.1e-21 105.9 103 58.3
MD03G1010200 Malus domestica HOM05D006265 ORTHO05D007822 4.7e-21 104.8 87 66.7
THA.LOC104811062 Tarenaya hassleriana HOM05D006265 ORTHO05D007822 4.7e-21 104.8 80 68.8
Aa31sc13G30 Aethionema arabicum HOM05D006265 ORTHO05D007822 6.2e-21 104.4 80 70.0
Cpa.g.sc1833.3 Carica papaya HOM05D006265 ORTHO05D007822 8.0e-21 104.0 107 59.8
Potri.003G216800 Populus trichocarpa HOM05D006265 ORTHO05D007822 8.0e-21 104.0 82 68.3
Peaxi162Scf00100g00717 Petunia axillaris HOM05D006265 ORTHO05D007822 1.4e-20 103.2 100 59.0
Atru.chr3.2261 Acer truncatum HOM05D006265 ORTHO05D007822 1.8e-20 102.8 111 55.0
Atru.chr3.2267 Acer truncatum HOM05D006265 ORTHO05D007822 1.8e-20 102.8 111 55.0
ECA233G5869 Erigeron canadensis HOM05D006265 ORTHO05D007822 1.8e-20 102.8 108 57.4
HanXRQChr02g0056581 Helianthus annuus HOM05D006265 ORTHO05D007822 1.8e-20 102.8 106 58.5
Hund21646 Selenicereus undatus HOM05D006265 ORTHO05D007822 1.8e-20 102.8 80 66.2
Thhalv10003817m.g Eutrema salsugineum HOM05D006265 ORTHO05D007822 3.1e-20 102.1 76 69.7
Cc01_g01630 Coffea canephora HOM05D006265 ORTHO05D007822 4.0e-20 101.7 107 55.1
Phvul.001G268200 Phaseolus vulgaris HOM05D006265 ORTHO05D007822 4.0e-20 101.7 103 57.3
Aqoxy1G00067 Aquilegia oxysepala HOM05D006265 ORTHO05D007822 5.2e-20 101.3 106 60.4
Nn2g15777 Nelumbo nucifera HOM05D006265 ORTHO05D007822 6.8e-20 100.9 103 59.2
Sabra03G0161900 Salix brachista HOM05D006265 ORTHO05D007822 6.8e-20 100.9 82 67.1
DCAR_001991 Daucus carota HOM05D006265 ORTHO05D007822 1.5e-19 99.8 103 59.2
Ah.06g193040 Amaranthus hybridus HOM05D006265 ORTHO05D007822 2.0e-19 99.4 102 58.8
Lj6g0010790 Lotus japonicus HOM05D006265 ORTHO05D007822 2.0e-19 99.4 103 61.2
Oeu023936.1 Olea europaea HOM05D006265 ORTHO05D007822 2.0e-19 99.4 79 68.4
Sabra01G0006700 Salix brachista HOM05D006265 ORTHO05D007822 2.6e-19 99.0 107 55.1
PGSC0003DMG400032140 Solanum tuberosum HOM05D006265 ORTHO05D007822 2.6e-19 99.0 100 57.0
arahy.Tifrunner.gnm1.ann1.L83JF4 Arachis hypogaea HOM05D006265 ORTHO05D007822 3.4e-19 98.6 101 57.4
MSTRG.18861 Avicennia marina HOM05D006265 ORTHO05D007822 3.4e-19 98.6 87 63.2
RcHm_v2.0_Chr5g0081541 Rosa chinensis HOM05D006265 ORTHO05D007822 4.4e-19 98.2 79 67.1
CDE04G0145 Ceratophyllum demersum HOM05D006265 ORTHO05D007822 5.8e-19 97.8 106 58.5
Potri.001G008700 Populus trichocarpa HOM05D006265 ORTHO05D007822 9.8e-19 97.1 104 57.7
arahy.Tifrunner.gnm1.ann1.BC49LP Arachis hypogaea HOM05D006265 ORTHO05D007822 1.7e-18 96.3 101 56.4
TWI60G0389 Tripterygium wilfordii HOM05D006265 ORTHO05D007822 1.7e-18 96.3 82 63.4
AUR62019195 Chenopodium quinoa HOM05D006265 ORTHO05D007822 2.2e-18 95.9 98 56.1
Solyc01g006010.3 Solanum lycopersicum HOM05D006265 ORTHO05D007822 2.2e-18 95.9 100 56.0
Sopen01g002020 Solanum pennellii HOM05D006265 ORTHO05D007822 2.2e-18 95.9 100 56.0
CANSAT80G0616 Cannabis sativa HOM05D006265 ORTHO05D007822 2.9e-18 95.5 86 64.0
CAN.G158.5 Capsicum annuum HOM05D006265 ORTHO05D007822 4.9e-18 94.7 95 55.8
SHI02888 Sapria himalayana HOM05D006265 ORTHO05D007822 4.9e-18 94.7 101 54.5
CARHR153580 Cardamine hirsuta HOM05D006265 ORTHO05D007822 8.3e-18 94.0 76 64.5
FvH4_3g44840 Fragaria vesca HOM05D006265 ORTHO05D007822 8.3e-18 94.0 79 64.6
FAN11G1034 Fragaria x ananassa HOM05D004308 ORTHO05D005139 8.3e-18 94.0 79 64.6
FAN21G1794 Fragaria x ananassa HOM05D004308 ORTHO05D005139 8.3e-18 94.0 79 64.6
Oeu029371.1 Olea europaea HOM05D006265 ORTHO05D007822 8.3e-18 94.0 107 56.1
SalBow6G4223 Salvia bowleyana HOM05D006265 ORTHO05D007822 8.3e-18 94.0 84 64.3
AUR62000024 Chenopodium quinoa HOM05D006265 ORTHO05D007822 1.9e-17 92.8 98 55.1
FAN25G3608 Fragaria x ananassa HOM05D006265 ORTHO05D007822 1.9e-17 92.8 79 64.6
Glyma.11G256000 Glycine max HOM05D006265 ORTHO05D007822 1.9e-17 92.8 102 54.9
CDE06G1898 Ceratophyllum demersum HOM05D006265 ORTHO05D007822 2.4e-17 92.4 103 56.3
PSO170G6775 Papaver somniferum HOM05D006265 ORTHO05D007822 2.4e-17 92.4 110 54.5
VMungo1383G2426 Vigna mungo HOM05D006265 ORTHO05D007822 2.4e-17 92.4 102 55.9
AT3G32940 Arabidopsis thaliana HOM05D006265 ORTHO05D007822 3.2e-17 92.0 78 66.7
Ca_16390_v3 Cicer arietinum L. HOM05D006265 ORTHO05D007822 3.2e-17 92.0 86 60.5
Ca_29696_v3 Cicer arietinum L. HOM05D006265 ORTHO05D007822 3.2e-17 92.0 86 60.5
Glyma.18G001100 Glycine max HOM05D006265 ORTHO05D007822 3.2e-17 92.0 76 68.4
FAN16G3355 Fragaria x ananassa HOM05D006265 ORTHO05D007822 4.1e-17 91.7 79 63.3
Psat5g103200 Pisum sativum HOM05D006265 ORTHO05D007822 4.1e-17 91.7 107 50.5
C07p38720 Brassica napus HOM05D006265 ORTHO05D007822 5.4e-17 91.3 79 67.1
BolC7t44392H Brassica oleracea HOM05D006265 ORTHO05D007822 5.4e-17 91.3 84 64.3
EL10Ac4g10351 Beta vulgaris HOM05D006265 ORTHO05D007822 1.2e-16 90.1 103 58.3
Sp2g18310 Schrenkiella parvula HOM05D006265 ORTHO05D007822 1.2e-16 90.1 76 64.5
TPR.G22747 Trifolium pratense HOM05D006265 ORTHO05D007822 1.2e-16 90.1 107 54.2
Carub.0005s0594 Capsella rubella HOM05D006265 ORTHO05D007822 2.1e-16 89.4 78 61.5
Medtr3g083770 Medicago truncatula HOM05D006265 ORTHO05D007822 3.5e-16 88.6 108 53.7
A06p39550 Brassica napus HOM05D006265 ORTHO05D007822 4.6e-16 88.2 79 63.3
BraA06t26870Z Brassica rapa HOM05D006265 ORTHO05D007822 4.6e-16 88.2 79 63.3
SGA_v2.0_scaffold18G08319 Striga asiatica HOM05D006265 ORTHO05D007822 1.0e-15 87.0 100 54.0
AL5G20540 Arabidopsis lyrata HOM05D006265 ORTHO05D007822 1.7e-15 86.3 79 65.8
PSO017G3167 Papaver somniferum HOM05D006265 ORTHO05D007822 2.3e-15 85.9 110 52.7
ATR0598G286 Amborella trichopoda HOM05D006265 ORTHO05D007822 4.3e-14 81.6 117 48.7
Migut.D02531 Erythranthe guttata HOM05D006265 ORTHO05D007822 9.5e-14 80.5 100 52.0
Ciclev10014343m.g Citrus clementina HOM05D006265 ORTHO05D007822 1.6e-13 79.7 83 55.4
unitig_8.g3597 Utricularia gibba HOM05D006265 ORTHO05D007822 3.6e-13 78.6 107 44.9
SEGI_19155 Sequoiadendron giganteum HOM05D006265 ORTHO05D007822 1.4e-12 76.6 113 48.7
Actinidia06291 Actinidia chinensis HOM05D006265 ORTHO05D007822 2.6e-11 72.4 58 65.5
SalBow4G2821 Salvia bowleyana HOM05D006265 ORTHO05D007822 4.9e-10 68.2 90 53.3
BcaB06g28229 Brassica carinata HOM05D006265 ORTHO05D007822 1.1e-09 67.0 65 58.5
Lalb_Chr11g0075951 Lupinus albus HOM05D006265 ORTHO05D007822 1.2e-08 63.5 89 49.4
DCAR_028615 Daucus carota HOM05D006265 ORTHO05D007822 1.3e-07 60.1 83 50.6
Os08g0100700 Oryza sativa ssp. japonica HOM05D006265 ORTHO05D007822 1.9e-06 56.2 102 40.2
Mapoly0033s0137 Marchantia polymorpha HOM05D006265 ORTHO05D003586 4.3e-06 55.1 85 48.2


User provided reference genes

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