Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-84 315.5 156 100.0
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.8e-58 228.4 149 77.9
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.2e-56 223.4 151 74.8
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.6e-56 223.0 150 76.0
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.5e-56 221.9 147 74.1
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.3e-54 214.9 143 74.8
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-50 203.0 141 74.5
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.1e-41 173.7 139 66.2
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.3e-36 154.8 156 60.3
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.3e-36 154.8 156 61.5
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 3.6e-32 142.1 157 51.0
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 2.0e-30 136.3 154 51.3
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 2.2e-29 132.9 139 53.2
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 4.8e-29 131.7 152 53.3
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 6.3e-29 131.3 153 49.7
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 1.4e-28 130.2 153 51.6
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 3.1e-28 129.0 142 54.2
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 5.3e-28 128.3 157 50.3
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 6.9e-28 127.9 142 53.5
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 3.4e-27 125.6 152 48.7
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.5e-27 125.2 153 48.4
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 7.7e-27 124.4 155 52.3
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 2.2e-26 122.9 140 52.9
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 6.5e-26 121.3 140 52.9
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 8.5e-26 120.9 148 48.0
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 2.5e-25 119.4 135 51.9
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 2.5e-25 119.4 156 48.1
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 7.2e-25 117.9 153 49.0
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.2e-24 117.1 152 47.4
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 2.1e-24 116.3 153 51.0
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 2.7e-24 115.9 137 54.7
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 2.7e-24 115.9 136 49.3
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 3.6e-24 115.5 144 53.5
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 6.1e-24 114.8 138 49.3
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 7.9e-24 114.4 140 46.4
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.0e-23 114.0 161 44.1
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.0e-23 114.0 162 44.4
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 2.3e-23 112.8 140 51.4
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 3.0e-23 112.5 138 47.8
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 3.0e-23 112.5 148 48.6
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 6.7e-23 111.3 161 44.1
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 8.8e-23 110.9 137 53.3
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 8.8e-23 110.9 153 45.1
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 1.1e-22 110.5 153 45.1
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 2.0e-22 109.8 150 44.0
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 2.6e-22 109.4 164 45.1
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 4.4e-22 108.6 138 48.6
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 5.7e-22 108.2 139 47.5
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 5.7e-22 108.2 154 43.5
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 7.4e-22 107.8 151 46.4
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 9.7e-22 107.5 141 46.8
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 9.7e-22 107.5 138 45.7
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 9.7e-22 107.5 135 45.9
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 2.2e-21 106.3 138 47.8
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 3.7e-21 105.5 149 43.0
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 4.8e-21 105.1 126 48.4
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 4.8e-21 105.1 139 46.8
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 4.8e-21 105.1 143 44.1
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 6.3e-21 104.8 140 46.4
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 8.2e-21 104.4 140 42.9
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 8.2e-21 104.4 174 43.1
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 1.1e-20 104.0 141 44.7
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 1.4e-20 103.6 126 49.2
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 1.4e-20 103.6 138 46.4
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 1.4e-20 103.6 138 46.4
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.8e-20 103.2 109 52.3
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 1.8e-20 103.2 158 42.4
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.8e-20 103.2 161 45.3
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 1.8e-20 103.2 121 55.4
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.4e-20 102.8 140 43.6
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 2.4e-20 102.8 145 45.5
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 3.1e-20 102.4 132 47.7
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.3e-20 101.7 151 45.0
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 7.0e-20 101.3 143 43.4
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 7.0e-20 101.3 152 43.4
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 1.2e-19 100.5 136 45.6
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 1.2e-19 100.5 136 45.6
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 1.2e-19 100.5 136 45.6
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 1.2e-19 100.5 135 43.7
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 1.5e-19 100.1 153 47.1
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.0e-19 99.8 157 42.7
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.6e-19 99.4 151 41.7
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 4.5e-19 98.6 134 45.5
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.9e-19 98.2 144 43.8
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 5.9e-19 98.2 152 41.4
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 7.7e-19 97.8 151 41.1
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 7.7e-19 97.8 159 40.3
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 7.7e-19 97.8 139 43.9
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 7.7e-19 97.8 135 43.0
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 1.0e-18 97.4 126 54.0
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 1.0e-18 97.4 142 44.4
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 1.3e-18 97.1 172 40.7
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 1.3e-18 97.1 161 40.4
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 1.3e-18 97.1 166 39.2
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 1.7e-18 96.7 137 43.1
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.7e-18 96.7 164 42.1
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 2.2e-18 96.3 136 45.6
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 2.2e-18 96.3 136 45.6
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 2.9e-18 95.9 121 47.9
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 3.8e-18 95.5 136 45.6
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 3.8e-18 95.5 149 38.9
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 3.8e-18 95.5 136 43.4
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 3.8e-18 95.5 163 41.7
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 6.5e-18 94.7 148 44.6
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 6.5e-18 94.7 131 42.0
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 8.5e-18 94.4 139 45.3
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 8.5e-18 94.4 146 41.8
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 1.1e-17 94.0 142 40.1
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.4e-17 93.6 146 43.2
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 2.5e-17 92.8 140 41.4
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 2.5e-17 92.8 173 37.0
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 2.5e-17 92.8 173 37.0
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 2.5e-17 92.8 173 37.0
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 7.2e-17 91.3 153 41.2
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 7.2e-17 91.3 146 42.5
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 7.2e-17 91.3 147 40.8
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 7.2e-17 91.3 144 41.7
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 7.2e-17 91.3 147 41.5
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 1.2e-16 90.5 142 41.5
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 2.1e-16 89.7 167 37.1
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 2.1e-16 89.7 148 40.5
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.7e-16 89.4 162 41.4
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 2.7e-16 89.4 157 42.7
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 3.6e-16 89.0 135 42.2
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 4.7e-16 88.6 139 43.2
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 6.1e-16 88.2 145 44.1
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 6.1e-16 88.2 141 46.1
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 6.1e-16 88.2 142 40.8
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.1e-16 88.2 148 45.9
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 1.0e-15 87.4 142 40.8
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 1.0e-15 87.4 142 40.8
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 1.0e-15 87.4 142 40.8
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.4e-15 87.0 100 53.0
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 1.4e-15 87.0 138 38.4
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 1.8e-15 86.7 146 41.1
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 2.3e-15 86.3 141 45.4
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 3.0e-15 85.9 167 36.5
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 3.9e-15 85.5 139 40.3
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 3.9e-15 85.5 162 37.0
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 1.5e-14 83.6 151 37.7
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 1.7e-13 80.1 107 45.8
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 4.8e-13 78.6 134 41.8
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 6.3e-13 78.2 188 35.1
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 4.1e-12 75.5 134 39.6
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 1.2e-11 73.9 155 38.7
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 2.0e-11 73.2 130 37.7
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 2.6e-11 72.8 111 45.9
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 4.5e-11 72.0 145 36.6
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 1.0e-10 70.9 109 37.6
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 1.7e-10 70.1 132 37.9
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.5e-09 67.0 143 35.0
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 9.4e-09 64.3 184 31.5
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 2.1e-08 63.2 127 37.0
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 2.7e-08 62.8 108 37.0
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 1.4e-07 60.5 126 38.1
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 3.0e-07 59.3 114 36.0
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 3.0e-07 59.3 113 38.9
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 1.2e-06 57.4 113 35.4
Nn2g14986 Nelumbo nucifera HOM05D003790 ORTHO05D004481 1.5e-06 57.0 52 50.0
CsaV3_4G001110 Cucumis sativus L. HOM05D003790 ORTHO05D044967 2.0e-06 56.6 132 32.6
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 3.3e-06 55.8 114 34.2
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 3.3e-06 55.8 129 34.1
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 4.4e-06 55.5 38 65.8
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 7.5e-06 54.7 38 65.8
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 9.7e-06 54.3 38 63.2


User provided reference genes

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