Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01678 Eucalyptus grandis HOM05D000355 ORTHO05D000227 2.7e-36 154.8 79 100.0
Eucgr.B03837 Eucalyptus grandis HOM05D000355 ORTHO05D000227 1.1e-34 149.4 78 97.4
COL.COLO4_34022 Corchorus olitorius HOM05D000355 ORTHO05D000227 2.3e-11 72.0 80 52.5
Prupe.6G134100 Prunus persica HOM05D000355 ORTHO05D000227 2.5e-10 68.6 84 54.8
Thecc.09G280300 Theobroma cacao HOM05D000355 ORTHO05D000227 4.3e-10 67.8 82 51.2
Cpa.g.sc195.12 Carica papaya HOM05D000355 ORTHO05D000227 5.6e-10 67.4 77 57.1
ClCG01G012080 Citrullus lanatus HOM05D000355 ORTHO05D000227 5.6e-10 67.4 78 53.8
Duzib150G0738 Durio zibethinus HOM05D000355 ORTHO05D000227 5.6e-10 67.4 82 51.2
THA.LOC104810921 Tarenaya hassleriana HOM05D000355 ORTHO05D000227 9.6e-10 66.6 81 49.4
Duzib168G0847 Durio zibethinus HOM05D000355 ORTHO05D000227 1.3e-09 66.2 80 50.0
CsaV3_1G014950 Cucumis sativus L. HOM05D000355 ORTHO05D000227 1.6e-09 65.9 81 54.3
CsaV3_1G015860 Cucumis sativus L. HOM05D000355 ORTHO05D000227 1.6e-09 65.9 81 54.3
Eucgr.J00504 Eucalyptus grandis HOM05D000355 ORTHO05D000227 2.1e-09 65.5 79 49.4
THA.LOC104814786 Tarenaya hassleriana HOM05D000355 ORTHO05D000227 2.8e-09 65.1 81 51.9
A03p39110 Brassica napus HOM05D000355 ORTHO05D000227 6.2e-09 63.9 79 48.1
BcaC09g48463 Brassica carinata HOM05D000355 ORTHO05D000227 8.1e-09 63.5 78 48.7
C01p49480 Brassica napus HOM05D000355 ORTHO05D000227 8.1e-09 63.5 78 48.7
BolC1t04905H Brassica oleracea HOM05D000355 ORTHO05D000227 8.1e-09 63.5 78 48.7
MELO3C004692.2 Cucumis melo HOM05D000355 ORTHO05D000227 8.1e-09 63.5 78 51.3
TWI79G1323 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 8.1e-09 63.5 79 50.6
BraA03t13060Z Brassica rapa HOM05D000355 ORTHO05D000227 1.1e-08 63.2 79 46.8
QL01p012022 Quercus lobata HOM05D000355 ORTHO05D000227 1.4e-08 62.8 76 57.9
Sp3g13240 Schrenkiella parvula HOM05D000355 ORTHO05D000227 1.8e-08 62.4 82 48.8
BraA05t22259Z Brassica rapa HOM05D000355 ORTHO05D000227 2.4e-08 62.0 82 50.0
A01p38890 Brassica napus HOM05D000355 ORTHO05D000227 3.1e-08 61.6 77 49.4
FAN11G0642 Fragaria x ananassa HOM05D000355 ORTHO05D000227 4.0e-08 61.2 80 52.5
PGR102G1031 Punica granatum HOM05D000355 ORTHO05D000227 4.0e-08 61.2 79 49.4
BraA01t03935Z Brassica rapa HOM05D000355 ORTHO05D000227 5.3e-08 60.8 77 48.1
C03p47390 Brassica napus HOM05D000355 ORTHO05D000227 6.9e-08 60.5 78 44.9
BolC3t17009H Brassica oleracea HOM05D000355 ORTHO05D000227 6.9e-08 60.5 78 44.9
CARHR090000 Cardamine hirsuta HOM05D000355 ORTHO05D000227 6.9e-08 60.5 82 47.6
Sed0022708 Sechium edule HOM05D000355 ORTHO05D000227 6.9e-08 60.5 78 53.8
TWI31G0922 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 6.9e-08 60.5 80 46.2
BcaC01g03905 Brassica carinata HOM05D000355 ORTHO05D000227 9.0e-08 60.1 79 44.3
CSS0014070 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 9.0e-08 60.1 78 46.2
CSS0037359 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 9.0e-08 60.1 78 46.2
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 9.0e-08 60.1 78 52.6
PGSC0003DMG400005883 Solanum tuberosum HOM05D000355 ORTHO05D000227 9.0e-08 60.1 79 51.9
DCAR_013411 Daucus carota HOM05D000355 ORTHO05D000227 1.2e-07 59.7 73 47.9
FAN25G0540 Fragaria x ananassa HOM05D000355 ORTHO05D000227 1.2e-07 59.7 80 53.8
Sopen06g030700 Solanum pennellii HOM05D000355 ORTHO05D000227 1.2e-07 59.7 78 52.6
BcaC01g03900 Brassica carinata HOM05D000355 ORTHO05D000227 2.0e-07 58.9 77 44.2
CiPaw.13G134300 Carya illinoinensis HOM05D000355 ORTHO05D000227 2.0e-07 58.9 76 55.3
BcaB04g20951 Brassica carinata HOM05D000355 ORTHO05D000227 2.6e-07 58.5 77 49.4
FvH4_3g25360 Fragaria vesca HOM05D000355 ORTHO05D000227 2.6e-07 58.5 80 51.2
BcaB06g29531 Brassica carinata HOM05D000355 ORTHO05D000227 3.4e-07 58.2 82 46.3
A05p34380 Brassica napus HOM05D000355 ORTHO05D000227 3.4e-07 58.2 82 47.6
C05p52160 Brassica napus HOM05D000355 ORTHO05D000227 3.4e-07 58.2 82 46.3
BolC5t33900H Brassica oleracea HOM05D000355 ORTHO05D000227 3.4e-07 58.2 82 46.3
CANSAT54G1123 Cannabis sativa HOM05D000355 ORTHO05D000227 3.4e-07 58.2 82 50.0
AL3G27380 Arabidopsis lyrata HOM05D000355 ORTHO05D000227 4.5e-07 57.8 82 48.8
AT3G15040 Arabidopsis thaliana HOM05D000355 ORTHO05D000227 4.5e-07 57.8 83 48.2
Carub.0003s1468 Capsella rubella HOM05D000355 ORTHO05D000227 4.5e-07 57.8 82 47.6
TAR636G3066 Trochodendron aralioides HOM05D000355 ORTHO05D000227 5.8e-07 57.4 80 48.8
Thhalv10021433m.g Eutrema salsugineum HOM05D000355 ORTHO05D000227 7.6e-07 57.0 81 45.7
Lsat_1_v5_gn_5_165660 Lactuca sativa HOM05D000355 ORTHO05D000227 7.6e-07 57.0 79 50.6
TWI75G0311 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 7.6e-07 57.0 74 48.6
Haze_23357 Corylus avellana HOM05D000355 ORTHO05D000227 1.3e-06 56.2 76 55.3
Dinv21173 Davidia involucrata HOM05D000355 ORTHO05D000227 1.3e-06 56.2 80 46.2
FAN21G1533 Fragaria x ananassa HOM05D000355 ORTHO05D000227 2.2e-06 55.5 80 50.0
Nitab4.5_0009390g0020 Nicotiana tabacum HOM05D000355 ORTHO05D000227 2.9e-06 55.1 79 41.8
Aa31LG8G2250 Aethionema arabicum HOM05D000355 ORTHO05D000227 3.8e-06 54.7 79 44.3
Nitab4.5_0001933g0070 Nicotiana tabacum HOM05D000355 ORTHO05D000227 3.8e-06 54.7 79 40.5
RcHm_v2.0_Chr5g0046711 Rosa chinensis HOM05D000355 ORTHO05D000227 3.8e-06 54.7 80 48.8
Dinv22826 Davidia involucrata HOM05D000052 ORTHO05D001127 4.9e-06 54.3 79 50.6
Gohir.A09G096300 Gossypium hirsutum HOM05D000355 ORTHO05D000227 6.4e-06 53.9 76 44.7
HanXRQChr13g0390171 Helianthus annuus HOM05D000355 ORTHO05D000227 6.4e-06 53.9 78 51.3
TAR633G1747 Trochodendron aralioides HOM05D000355 ORTHO05D000227 6.4e-06 53.9 85 50.6
GSVIVG01033884001 Vitis vinifera HOM05D000355 ORTHO05D000227 6.4e-06 53.9 79 44.3
CAN.G397.83 Capsicum annuum HOM05D000355 ORTHO05D000227 8.4e-06 53.5 77 44.2
Dinv31715 Davidia involucrata HOM05D000355 ORTHO05D000227 8.4e-06 53.5 81 46.9


User provided reference genes

Program Settings