Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 2.9e-37 158.7 124 100.0
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 5.4e-15 84.7 69 62.3
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 7.7e-14 80.9 70 61.4
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 1.0e-13 80.5 67 62.7
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 2.9e-13 79.0 67 65.7
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 3.8e-13 78.6 66 60.6
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 3.8e-13 78.6 66 60.6
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 5.0e-13 78.2 70 62.9
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 5.0e-13 78.2 67 61.2
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 5.0e-13 78.2 67 65.7
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 6.5e-13 77.8 85 55.3
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 6.5e-13 77.8 67 62.7
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 8.5e-13 77.4 67 64.2
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 3.2e-12 75.5 67 61.2
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 4.2e-12 75.1 66 59.1
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 5.5e-12 74.7 65 64.6
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 7.2e-12 74.3 63 63.5
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 1.6e-11 73.2 67 58.2
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 1.6e-11 73.2 67 58.2
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 2.1e-11 72.8 67 58.2
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 2.1e-11 72.8 67 62.7
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 2.7e-11 72.4 71 54.9
Lalb_Chr04g0257791 Lupinus albus HOM05D008198 ORTHO05D010220 2.7e-11 72.4 55 65.5
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 2.7e-11 72.4 62 64.5
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 6.1e-11 71.2 68 55.9
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 6.1e-11 71.2 69 60.9
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 8.0e-11 70.9 67 58.2
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 8.0e-11 70.9 67 58.2
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 1.0e-10 70.5 67 59.7
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 1.0e-10 70.5 67 58.2
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 1.4e-10 70.1 66 57.6
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 1.4e-10 70.1 67 59.7
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 1.8e-10 69.7 69 58.0
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 1.8e-10 69.7 72 55.6
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 1.8e-10 69.7 72 55.6
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 1.8e-10 69.7 63 54.0
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 1.8e-10 69.7 67 61.2
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 1.8e-10 69.7 72 55.6
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 2.3e-10 69.3 72 55.6
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 3.0e-10 68.9 68 60.3
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 3.0e-10 68.9 68 61.8
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 4.0e-10 68.6 68 54.4
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 4.0e-10 68.6 72 55.6
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 5.2e-10 68.2 67 55.2
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 8.8e-10 67.4 65 61.5
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 2.0e-09 66.2 72 52.8
C03p82100 Brassica napus HOM05D008198 ORTHO05D010220 2.0e-09 66.2 66 57.6
BolC3t20547H Brassica oleracea HOM05D008198 ORTHO05D010220 2.0e-09 66.2 66 57.6
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 3.4e-09 65.5 68 57.4
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 4.4e-09 65.1 68 60.3
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 4.4e-09 65.1 68 60.3
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 4.4e-09 65.1 68 58.8
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 5.7e-09 64.7 67 56.7
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 5.7e-09 64.7 71 52.1
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 7.5e-09 64.3 61 59.0
BcaC09g51355 Brassica carinata HOM05D008198 ORTHO05D010220 7.5e-09 64.3 69 56.5
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 9.8e-09 63.9 61 62.3
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 1.3e-08 63.5 70 52.9
SGA_v2.0_scaffold298G47697 Striga asiatica HOM05D008198 ORTHO05D010220 1.3e-08 63.5 49 63.3
C01p13980 Brassica napus HOM05D008198 ORTHO05D010220 1.7e-08 63.2 68 54.4
BolC1t01365H Brassica oleracea HOM05D008198 ORTHO05D010220 1.7e-08 63.2 68 54.4
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 2.2e-08 62.8 69 55.1
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 2.8e-08 62.4 86 47.7
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 1.2e-06 57.0 67 50.7
Aa31LG6G2390 Aethionema arabicum HOM05D008198 ORTHO05D010220 2.0e-06 56.2 71 43.7


User provided reference genes

Program Settings