Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01545 Eucalyptus grandis HOM05D000141 ORTHO05D023185 2.9e-85 318.5 161 100.0
CSS0026300 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001311 5.9e-22 108.2 193 40.9
Potri.005G030484 Populus trichocarpa HOM05D000141 ORTHO05D023185 1.3e-21 107.1 178 43.3
Potri.005G030271 Populus trichocarpa HOM05D000141 ORTHO05D001311 1.7e-21 106.7 183 42.1
Potri.005G031801 Populus trichocarpa HOM05D000141 ORTHO05D001311 8.5e-21 104.4 183 40.4
Potri.013G020700 Populus trichocarpa HOM05D000141 ORTHO05D001311 2.5e-20 102.8 184 40.2
Actinidia23633 Actinidia chinensis HOM05D000141 ORTHO05D001311 3.2e-20 102.4 182 41.8
QL03p006990 Quercus lobata HOM05D000141 ORTHO05D001311 3.2e-20 102.4 193 40.4
Ciclev10003680m.g Citrus clementina HOM05D004847 ORTHO05D001311 5.5e-20 101.7 190 37.9
Manes.08G120600 Manihot esculenta HOM05D000141 ORTHO05D001311 7.2e-20 101.3 191 38.2
TWI56G0333 Tripterygium wilfordii HOM05D000141 ORTHO05D001311 1.2e-19 100.5 193 44.6
GSVIVG01000050001 Vitis vinifera HOM05D000141 ORTHO05D001311 2.1e-19 99.8 190 41.6
Sabra05G0034100 Salix brachista HOM05D000141 ORTHO05D001311 3.6e-19 99.0 180 40.0
Sabra13G0023100 Salix brachista HOM05D000141 ORTHO05D001311 3.6e-19 99.0 200 38.5
Dinv40286 Davidia involucrata HOM05D000141 ORTHO05D001311 6.1e-19 98.2 191 41.4
PGR083G2277 Punica granatum HOM05D000141 ORTHO05D001311 6.1e-19 98.2 179 41.3
Thecc.05G303600 Theobroma cacao HOM05D000141 ORTHO05D001311 2.3e-18 96.3 187 36.9
TWI12G1241 Tripterygium wilfordii HOM05D000141 ORTHO05D001311 2.3e-18 96.3 187 42.2
Cpa.g.sc48.52 Carica papaya HOM05D000141 ORTHO05D001311 3.0e-18 95.9 185 38.9
Manes.09G167000 Manihot esculenta HOM05D000141 ORTHO05D001311 3.0e-18 95.9 188 38.8
Duzib177G1109 Durio zibethinus HOM05D000141 ORTHO05D001311 3.9e-18 95.5 187 39.0
CiPaw.07G017700 Carya illinoinensis HOM05D000141 ORTHO05D001311 6.7e-18 94.7 195 40.0
Gohir.D11G275100 Gossypium hirsutum HOM05D000141 ORTHO05D001311 1.5e-17 93.6 176 39.2
Gorai.007G296900 Gossypium raimondii HOM05D000141 ORTHO05D001311 1.5e-17 93.6 176 39.2
COL.COLO4_13471 Corchorus olitorius HOM05D006315 ORTHO05D008052 2.0e-17 93.2 182 40.7
Gohir.A11G264900 Gossypium hirsutum HOM05D000141 ORTHO05D001311 2.6e-17 92.8 176 40.3
Sopen01g042550 Solanum pennellii HOM05D000141 ORTHO05D001311 4.4e-17 92.0 192 40.1
vmacro22527 Vaccinium macrocarpon HOM05D000141 ORTHO05D001311 4.4e-17 92.0 194 40.2
CAN.G1034.10 Capsicum annuum HOM05D000141 ORTHO05D001311 5.7e-17 91.7 193 38.3
Prupe.6G326000 Prunus persica HOM05D000141 ORTHO05D001311 5.7e-17 91.7 183 38.3
PGSC0003DMG400018991 Solanum tuberosum HOM05D000141 ORTHO05D001311 7.4e-17 91.3 193 38.9
CiPaw.08G164800 Carya illinoinensis HOM05D000141 ORTHO05D001311 9.7e-17 90.9 193 38.3
Cc11_g03540 Coffea canephora HOM05D000141 ORTHO05D001311 1.1e-15 87.4 192 39.1
CSS0028213 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001311 1.4e-15 87.0 192 37.0
vmacro05018 Vaccinium macrocarpon HOM05D000141 ORTHO05D001311 1.8e-15 86.7 194 38.7
Gohir.D11G311300 Gossypium hirsutum HOM05D000141 ORTHO05D001311 5.3e-15 85.1 188 36.2
TAR636G0732 Trochodendron aralioides HOM05D000141 ORTHO05D001311 6.9e-15 84.7 187 38.5
EL10Ac4g09349 Beta vulgaris HOM05D000141 ORTHO05D001311 1.2e-14 84.0 189 34.9
DCAR_001937 Daucus carota HOM05D000141 ORTHO05D001311 1.2e-14 84.0 187 38.5
Gohir.A11G295600 Gossypium hirsutum HOM05D000141 ORTHO05D001311 2.0e-14 83.2 188 35.6
Gorai.007G342500 Gossypium raimondii HOM05D000141 ORTHO05D001311 2.0e-14 83.2 188 35.6
RhsimUnG0225700 Rhododendron simsii HOM05D000141 ORTHO05D001311 2.0e-14 83.2 196 40.8
Haze_04197 Corylus avellana HOM05D000141 ORTHO05D001311 4.5e-14 82.0 192 37.5
Migut.N02004 Erythranthe guttata HOM05D000141 ORTHO05D001311 4.5e-14 82.0 184 38.0
MSTRG.28000 Avicennia marina HOM05D000141 ORTHO05D001311 5.9e-14 81.6 191 35.1
Medtr1g082920 Medicago truncatula HOM05D000141 ORTHO05D001311 5.9e-14 81.6 181 37.6
HanXRQChr09g0277481 Helianthus annuus HOM05D000141 ORTHO05D001311 7.7e-14 81.3 202 35.6
Nn4g26256 Nelumbo nucifera HOM05D000141 ORTHO05D001311 1.0e-13 80.9 186 34.4
Lj5A534T53 Lonicera japonica HOM05D000141 ORTHO05D001311 1.3e-13 80.5 222 36.0
RcHm_v2.0_Chr3g0454741 Rosa chinensis HOM05D000141 ORTHO05D001311 1.7e-13 80.1 190 36.3
PSO832G0670 Papaver somniferum HOM05D000141 ORTHO05D001311 3.8e-13 79.0 203 36.5
THA.LOC104818697 Tarenaya hassleriana HOM05D000141 ORTHO05D001311 6.5e-13 78.2 208 33.2
FAN02G1530 Fragaria x ananassa HOM05D000141 ORTHO05D001311 8.5e-13 77.8 193 36.3
Nitab4.5_0004395g0050 Nicotiana tabacum HOM05D000141 ORTHO05D002968 8.5e-13 77.8 191 38.7
Peaxi162Scf00037g00328 Petunia axillaris HOM05D000141 ORTHO05D002968 1.1e-12 77.4 184 35.9
Ca_10112_v3 Cicer arietinum L. HOM05D000141 ORTHO05D001311 2.5e-12 76.3 174 37.4
ECA236G0945 Erigeron canadensis HOM05D000141 ORTHO05D001311 2.5e-12 76.3 187 35.3
Nitab4.5_0000137g0350 Nicotiana tabacum HOM05D000141 ORTHO05D002968 3.2e-12 75.9 190 38.9
FAN05G2746 Fragaria x ananassa HOM05D000141 ORTHO05D001311 4.2e-12 75.5 190 34.7
Oeu017486.1 Olea europaea HOM05D000141 ORTHO05D001311 4.2e-12 75.5 191 34.6
Sc06g0003320 Simmondsia chinensis HOM05D000141 ORTHO05D001311 5.5e-12 75.1 190 35.3
AUR62000829 Chenopodium quinoa HOM05D000141 ORTHO05D001311 7.2e-12 74.7 183 32.2
TPR.G6070 Trifolium pratense HOM05D000141 ORTHO05D001311 9.4e-12 74.3 184 38.6
FAN05G0885 Fragaria x ananassa HOM05D000141 ORTHO05D001311 1.2e-11 73.9 190 34.2
Sed0011027 Sechium edule HOM05D000141 ORTHO05D001311 1.6e-11 73.6 195 36.4
SGA_v2.0_scaffold81G26071 Striga asiatica HOM05D000141 ORTHO05D001311 1.6e-11 73.6 181 38.1
HanXRQChr15g0469981 Helianthus annuus HOM05D000141 ORTHO05D001311 2.1e-11 73.2 180 35.6
Aa31LG5G15720 Aethionema arabicum HOM05D000141 ORTHO05D001311 2.7e-11 72.8 189 35.4
AT5G27550 Arabidopsis thaliana HOM05D000141 ORTHO05D001311 3.6e-11 72.4 174 35.1
PSO210G1824 Papaver somniferum HOM05D000141 ORTHO05D001311 4.7e-11 72.0 199 34.2
Sed0018880 Sechium edule HOM05D000141 ORTHO05D001311 4.7e-11 72.0 196 34.7
AUR62005145 Chenopodium quinoa HOM05D000141 ORTHO05D001311 8.0e-11 71.2 175 33.1
FvH4_6g05830 Fragaria vesca HOM05D000141 ORTHO05D001311 8.0e-11 71.2 191 34.6
FAN09G4402 Fragaria x ananassa HOM05D000141 ORTHO05D001311 8.0e-11 71.2 191 34.6
FAN14G0633 Fragaria x ananassa HOM05D000141 ORTHO05D001311 8.0e-11 71.2 191 34.6
FAN14G3746 Fragaria x ananassa HOM05D000141 ORTHO05D001311 8.0e-11 71.2 191 34.6
Dinv23940 Davidia involucrata HOM05D000141 ORTHO05D001311 1.0e-10 70.9 85 51.8
Sc06g0003530 Simmondsia chinensis HOM05D000141 ORTHO05D001311 1.0e-10 70.9 195 33.8
Sp2g20730 Schrenkiella parvula HOM05D000141 ORTHO05D001311 1.4e-10 70.5 195 35.4
AL6G39460 Arabidopsis lyrata HOM05D000141 ORTHO05D001311 1.8e-10 70.1 173 32.9
CARHR186110 Cardamine hirsuta HOM05D000141 ORTHO05D001311 2.3e-10 69.7 174 33.9
Duzib128G1374 Durio zibethinus HOM05D000141 ORTHO05D001311 2.3e-10 69.7 185 34.6
CANSAT54G1239 Cannabis sativa HOM05D000141 ORTHO05D001311 3.0e-10 69.3 88 52.3
Carub.0006s2501 Capsella rubella HOM05D000141 ORTHO05D001311 3.9e-10 68.9 183 33.3
CsaV3_2G005260 Cucumis sativus L. HOM05D000141 ORTHO05D001311 5.2e-10 68.6 201 37.3
Aqoxy2G03340 Aquilegia oxysepala HOM05D000141 ORTHO05D001311 6.7e-10 68.2 214 33.2
Lj9C33G9 Lonicera japonica HOM05D000141 ORTHO05D001311 6.7e-10 68.2 193 35.8
MD04G1205300 Malus domestica HOM05D000141 ORTHO05D001311 6.7e-10 68.2 185 31.4
Aa31LG11G9270 Aethionema arabicum HOM05D000141 ORTHO05D001311 8.8e-10 67.8 198 31.3
MELO3C004267.2 Cucumis melo HOM05D000141 ORTHO05D001311 1.1e-09 67.4 202 36.6
Solyc01g098980.4 Solanum lycopersicum HOM05D000141 ORTHO05D002968 2.0e-09 66.6 196 33.7
Hund07069 Selenicereus undatus HOM05D000141 ORTHO05D001311 2.6e-09 66.2 236 29.7
Aqoxy5G00504 Aquilegia oxysepala HOM05D000141 ORTHO05D001311 3.3e-09 65.9 82 50.0
A09p05340 Brassica napus HOM05D000141 ORTHO05D001311 3.3e-09 65.9 194 35.1
C09p05820 Brassica napus HOM05D000141 ORTHO05D001311 7.4e-09 64.7 191 31.4
BolC9t53509H Brassica oleracea HOM05D000141 ORTHO05D001311 7.4e-09 64.7 191 31.4
ClCG02G015810 Citrullus lanatus HOM05D000141 ORTHO05D001311 7.4e-09 64.7 183 35.5
C02p58170 Brassica napus HOM05D000141 ORTHO05D001311 1.7e-08 63.5 189 33.3
BolC2t11885H Brassica oleracea HOM05D000141 ORTHO05D001311 1.7e-08 63.5 189 33.3
MBI17_g45014_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D001311 1.7e-08 63.5 182 33.0
unitig_0.g2370 Utricularia gibba HOM05D000141 ORTHO05D001311 1.7e-08 63.5 174 33.3
Glyma.20G234100 Glycine max HOM05D000141 ORTHO05D001311 2.2e-08 63.2 191 30.4
BraA09t36172Z Brassica rapa HOM05D000141 ORTHO05D001311 2.8e-08 62.8 194 34.5
BraA02t08843Z Brassica rapa HOM05D000141 ORTHO05D001311 6.3e-08 61.6 182 34.6
SHI18142 Sapria himalayana HOM05D000141 ORTHO05D001311 1.1e-07 60.8 191 32.5
Atru.chr2.409 Acer truncatum HOM05D000141 ORTHO05D023185 1.4e-07 60.5 34 82.4
Thhalv10005446m.g Eutrema salsugineum HOM05D000141 ORTHO05D001311 1.4e-07 60.5 182 36.3
MBI17_g09112_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D001311 1.4e-07 60.5 184 32.6
MD12G1219400 Malus domestica HOM05D000141 ORTHO05D001311 2.4e-07 59.7 184 29.9
Lalb_Chr02g0148241 Lupinus albus HOM05D000141 ORTHO05D001311 3.1e-07 59.3 87 52.9
Glyma.10G154200 Glycine max HOM05D000141 ORTHO05D001311 9.1e-07 57.8 192 29.2
Actinidia19787 Actinidia chinensis HOM05D000141 ORTHO05D001311 1.2e-06 57.4 108 39.8
Lj5g0028077 Lotus japonicus HOM05D000141 ORTHO05D001311 3.5e-06 55.8 88 48.9
Eucgr.L03767 Eucalyptus grandis HOM05D000141 ORTHO05D023185 4.5e-06 55.5 24 100.0
A02p38670 Brassica napus HOM05D000141 ORTHO05D001311 5.9e-06 55.1 194 34.5


User provided reference genes

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