Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 5.7e-50 200.7 106 100.0
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.4e-48 196.1 106 98.1
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 3.1e-48 194.9 106 97.2
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 8.6e-22 107.1 107 59.8
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 3.3e-21 105.1 92 67.4
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 2.8e-20 102.1 105 52.4
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 2.8e-20 102.1 107 57.0
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 1.8e-19 99.4 106 55.7
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 2.0e-18 95.9 105 54.3
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 3.4e-18 95.1 102 57.8
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 3.4e-18 95.1 105 51.4
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 1.7e-17 92.8 105 53.3
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 2.2e-17 92.4 90 58.9
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 2.9e-17 92.0 106 52.8
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 4.9e-17 91.3 101 53.5
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 6.4e-17 90.9 106 52.8
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 8.3e-17 90.5 107 52.3
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 8.3e-17 90.5 107 52.3
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 1.9e-16 89.4 86 61.6
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 1.9e-16 89.4 105 49.5
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 2.4e-16 89.0 107 48.6
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 3.2e-16 88.6 97 50.5
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 4.1e-16 88.2 91 58.2
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 4.1e-16 88.2 106 50.0
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 4.1e-16 88.2 106 49.1
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 7.1e-16 87.4 97 49.5
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 9.2e-16 87.0 106 49.1
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 9.2e-16 87.0 106 49.1
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 9.2e-16 87.0 105 47.6
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.2e-15 86.7 107 50.5
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 1.6e-15 86.3 106 51.9
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 1.6e-15 86.3 106 49.1
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 1.6e-15 86.3 106 49.1
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 1.0e-14 83.6 106 50.0
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 1.7e-14 82.8 109 48.6
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 1.7e-14 82.8 107 51.4
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 2.3e-14 82.4 106 47.2
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 3.0e-14 82.0 109 49.5
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 3.0e-14 82.0 106 49.1
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 3.0e-14 82.0 108 48.1
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 3.9e-14 81.6 110 50.0
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 5.1e-14 81.3 109 54.1
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 6.6e-14 80.9 92 50.0
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 6.6e-14 80.9 110 45.5
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 8.6e-14 80.5 110 46.4
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 1.5e-13 79.7 102 48.0
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 1.5e-13 79.7 106 50.9
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 1.9e-13 79.3 105 50.5
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 1.9e-13 79.3 91 51.6
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 4.3e-13 78.2 106 47.2
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 4.3e-13 78.2 107 46.7
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 5.6e-13 77.8 108 49.1
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 9.5e-13 77.0 88 52.3
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 1.6e-12 76.3 106 48.1
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 1.6e-12 76.3 106 52.8
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.6e-12 76.3 106 52.8
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.6e-12 76.3 106 52.8
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 2.1e-12 75.9 108 47.2
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 2.1e-12 75.9 97 49.5
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 2.1e-12 75.9 106 45.3
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 2.1e-12 75.9 114 47.4
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 2.8e-12 75.5 99 46.5
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 2.8e-12 75.5 106 48.1
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 3.6e-12 75.1 106 47.2
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 3.6e-12 75.1 104 44.2
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 6.2e-12 74.3 73 60.3
QL11p053603 Quercus lobata HOM05D000509 ORTHO05D006393 6.2e-12 74.3 73 60.3
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 1.1e-11 73.6 107 49.5
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 2.3e-11 72.4 110 44.5
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 3.1e-11 72.0 107 46.7
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 4.0e-11 71.6 107 47.7
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 6.8e-11 70.9 101 44.6
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 6.8e-11 70.9 102 42.2
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 1.5e-10 69.7 96 45.8
Potri.006G202400 Populus trichocarpa HOM05D000509 ORTHO05D006393 3.4e-10 68.6 88 50.0
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 3.4e-10 68.6 110 42.7
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 4.4e-10 68.2 141 38.3
DCAR_015993 Daucus carota HOM05D000509 ORTHO05D006393 4.4e-10 68.2 91 48.4
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 4.4e-10 68.2 91 45.1
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 9.9e-10 67.0 109 40.4
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.3e-09 66.6 106 50.0
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.3e-09 66.6 106 50.0
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.7e-09 66.2 106 50.0
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 2.2e-09 65.9 100 41.0
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 2.9e-09 65.5 106 39.6
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 3.8e-09 65.1 96 44.8
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 6.4e-09 64.3 104 45.2
Aqoxy7G00306 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 1.4e-08 63.2 86 47.7
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 1.4e-08 63.2 103 44.7
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 1.9e-08 62.8 105 42.9
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 2.4e-08 62.4 97 39.2
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 3.2e-08 62.0 105 43.8
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 3.2e-08 62.0 108 41.7
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 4.1e-08 61.6 63 54.0
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 4.1e-08 61.6 90 43.3
ClCG06G003680 Citrullus lanatus HOM05D000509 ORTHO05D006393 5.4e-08 61.2 102 42.2
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 5.4e-08 61.2 105 46.7
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 2.1e-07 59.3 105 39.0
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 2.7e-07 58.9 101 42.6
FAN01G0359 Fragaria x ananassa HOM05D000509 ORTHO05D006393 2.7e-07 58.9 90 50.0
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 2.7e-07 58.9 60 58.3
MELO3C021209.2 Cucumis melo HOM05D000509 ORTHO05D006393 3.5e-07 58.5 103 42.7
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 4.6e-07 58.2 66 48.5
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 4.6e-07 58.2 66 48.5
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 6.0e-07 57.8 57 50.9
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 6.0e-07 57.8 57 50.9
Aa31LG5G5170 Aethionema arabicum HOM05D000509 ORTHO05D006393 1.0e-06 57.0 65 47.7
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 1.0e-06 57.0 91 40.7
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 3.0e-06 55.5 57 50.9
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 3.0e-06 55.5 104 39.4
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 3.0e-06 55.5 106 38.7
AT4G07940 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 3.9e-06 55.1 92 37.0
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 6.6e-06 54.3 93 36.6
Medtr8g095650 Medicago truncatula HOM05D000509 ORTHO05D006393 6.6e-06 54.3 100 42.0


User provided reference genes

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