Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01430 Eucalyptus grandis HOM05D002011 ORTHO05D001948 4.2e-133 478.4 314 100.0
CiPaw.01G252000 Carya illinoinensis HOM05D002011 ORTHO05D001948 6.7e-14 82.4 231 36.4
Cpa.g.sc10.124 Carica papaya HOM05D002011 ORTHO05D001948 6.3e-12 75.9 248 32.7
FvH4_6g29000 Fragaria vesca HOM05D002011 ORTHO05D001948 1.4e-11 74.7 231 32.0
QL05p034085 Quercus lobata HOM05D002011 ORTHO05D001948 1.8e-11 74.3 237 31.2
FAN05G1371 Fragaria x ananassa HOM05D002011 ORTHO05D001948 3.1e-11 73.6 231 31.6
FAN05G4451 Fragaria x ananassa HOM05D002011 ORTHO05D001948 3.1e-11 73.6 231 31.6
Dinv23313 Davidia involucrata HOM05D002011 ORTHO05D001948 9.1e-11 72.0 233 32.2
FAN14G4768 Fragaria x ananassa HOM05D002011 ORTHO05D001948 1.2e-10 71.6 231 31.6
FAN02G4077 Fragaria x ananassa HOM05D002011 ORTHO05D001948 1.6e-10 71.2 231 31.6
FAN09G3914 Fragaria x ananassa HOM05D002011 ORTHO05D001948 5.9e-10 69.3 237 31.6
Cfa001910 Carpinus fangiana HOM05D002011 ORTHO05D001948 2.2e-09 67.4 238 37.8
MD09G1223300 Malus domestica HOM05D002011 ORTHO05D001948 2.2e-09 67.4 235 31.5
Potri.017G053900 Populus trichocarpa HOM05D002011 ORTHO05D001948 2.2e-09 67.4 216 33.8
VMungo1080G1625 Vigna mungo HOM05D002011 ORTHO05D001948 3.8e-09 66.6 232 30.6
Ciclev10026302m.g Citrus clementina HOM05D002011 ORTHO05D001948 8.5e-09 65.5 250 32.4
Rhsim08G0208500 Rhododendron simsii HOM05D002011 ORTHO05D001948 8.5e-09 65.5 239 43.5
Lalb_Chr24g0395351 Lupinus albus HOM05D002011 ORTHO05D001948 1.1e-08 65.1 218 34.4
SGA_v2.0_scaffold37G14736 Striga asiatica HOM05D002011 ORTHO05D001948 1.1e-08 65.1 220 30.9
Lalb_Chr22g0350711 Lupinus albus HOM05D002011 ORTHO05D001948 2.5e-08 63.9 205 33.7
MD17G1219700 Malus domestica HOM05D002011 ORTHO05D001948 3.2e-08 63.5 241 32.0
Rhsim12G0188600 Rhododendron simsii HOM05D002011 ORTHO05D001948 4.2e-08 63.2 240 47.9
vmacro16866 Vaccinium macrocarpon HOM05D002011 ORTHO05D001948 5.5e-08 62.8 117 39.3
Lj3g0008755 Lotus japonicus HOM05D002011 ORTHO05D001948 7.2e-08 62.4 235 30.2
Phvul.005G181100 Phaseolus vulgaris HOM05D002011 ORTHO05D001948 7.2e-08 62.4 229 31.9
Glyma.15G004800 Glycine max HOM05D002011 ORTHO05D001948 9.4e-08 62.0 225 33.3
Prupe.3G095200 Prunus persica HOM05D002011 ORTHO05D001948 1.6e-07 61.2 235 30.2
Sabra17G0045900 Salix brachista HOM05D002011 ORTHO05D001948 2.7e-07 60.5 224 31.7
RcHm_v2.0_Chr2g0133521 Rosa chinensis HOM05D002011 ORTHO05D001948 4.7e-07 59.7 233 36.5
CiPaw.02G160500 Carya illinoinensis HOM05D002011 ORTHO05D001948 6.1e-07 59.3 176 32.4
THA.LOC104813311 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 6.1e-07 59.3 207 30.4
Thhalv10008783m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 1.4e-06 58.2 162 33.3
Atru.chr10.2381 Acer truncatum HOM05D002011 ORTHO05D001948 1.8e-06 57.8 232 35.8
Sabra17G0040900 Salix brachista HOM05D002011 ORTHO05D001948 1.8e-06 57.8 224 31.2
Peaxi162Scf00332g00224 Petunia axillaris HOM05D002011 ORTHO05D001948 2.3e-06 57.4 233 34.8
Nn8g39727 Nelumbo nucifera HOM05D002011 ORTHO05D001948 3.0e-06 57.0 246 29.3
Actinidia08950 Actinidia chinensis HOM05D002011 ORTHO05D001948 4.0e-06 56.6 230 41.7
Lj5C77G14 Lonicera japonica HOM05D002011 ORTHO05D001948 5.2e-06 56.2 224 31.2
Oeu010089.1 Olea europaea HOM05D002011 ORTHO05D001948 5.2e-06 56.2 231 27.7
AT1G80610 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 6.7e-06 55.8 205 41.0
Migut.D01093 Erythranthe guttata HOM05D002011 ORTHO05D001948 8.8e-06 55.5 240 32.9
Sp5g35160 Schrenkiella parvula HOM05D002011 ORTHO05D001948 8.8e-06 55.5 202 28.7


User provided reference genes

Program Settings