Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 4.1e-198 694.5 344 100.0
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.2e-197 693.0 344 99.7
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 6.4e-143 511.1 340 70.3
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.5e-139 500.0 294 87.1
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 9.0e-137 490.7 344 68.3
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 5.8e-136 488.0 341 67.4
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 5.4e-134 481.5 342 67.3
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 1.6e-133 479.9 342 67.3
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 1.6e-133 479.9 343 65.6
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 6.0e-133 478.0 342 67.0
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 1.0e-132 477.2 342 67.0
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 1.0e-132 477.2 335 66.0
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 1.3e-132 476.9 341 65.1
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 1.3e-132 476.9 340 67.1
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 2.3e-132 476.1 341 66.6
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 3.0e-132 475.7 344 64.0
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 3.0e-132 475.7 344 65.4
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 3.9e-132 475.3 344 66.6
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 5.1e-132 474.9 348 64.7
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 6.7e-132 474.6 344 63.7
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 6.7e-132 474.6 343 65.6
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 6.7e-132 474.6 340 64.7
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 4.3e-131 471.9 341 65.4
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 4.3e-131 471.9 338 67.5
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 5.6e-131 471.5 344 63.4
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 7.4e-131 471.1 336 67.0
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 1.3e-130 470.3 337 65.9
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 2.1e-130 469.5 346 65.3
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 2.1e-130 469.5 342 66.7
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 2.8e-130 469.2 341 66.6
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 1.4e-129 466.8 346 65.3
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 1.4e-129 466.8 346 64.5
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 5.3e-129 464.9 336 65.8
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 9.0e-129 464.2 342 63.5
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 2.6e-128 462.6 346 64.2
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 7.6e-128 461.1 347 63.1
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 7.6e-128 461.1 339 64.9
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 2.2e-127 459.5 336 64.3
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 2.9e-127 459.1 341 63.3
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 3.8e-127 458.8 335 62.7
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 1.4e-126 456.8 343 66.5
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 3.2e-126 455.7 344 61.6
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 4.2e-126 455.3 336 62.5
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 5.5e-126 454.9 335 62.7
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 5.5e-126 454.9 344 63.7
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 5.5e-126 454.9 336 64.0
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 7.1e-126 454.5 336 63.7
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 9.3e-126 454.1 342 62.9
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 9.3e-126 454.1 339 63.7
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 1.2e-125 453.8 335 62.1
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 1.2e-125 453.8 335 62.4
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 2.1e-125 453.0 335 62.1
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 2.1e-125 453.0 342 60.5
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.1e-125 453.0 340 63.8
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 2.1e-125 453.0 336 64.0
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 2.7e-125 452.6 336 64.0
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 3.5e-125 452.2 339 63.4
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 4.6e-125 451.8 331 63.1
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 4.6e-125 451.8 336 64.3
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 7.9e-125 451.1 338 62.4
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 1.3e-124 450.3 343 63.8
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 1.3e-124 450.3 336 63.7
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 2.3e-124 449.5 340 61.5
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 2.3e-124 449.5 335 61.5
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 2.3e-124 449.5 333 64.0
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 3.9e-124 448.7 341 63.3
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 6.7e-124 448.0 335 61.8
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 8.7e-124 447.6 334 63.8
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 1.1e-123 447.2 338 63.9
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 1.5e-123 446.8 335 61.2
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 1.9e-123 446.4 339 63.7
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 1.9e-123 446.4 334 62.0
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 3.3e-123 445.7 335 62.1
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 2.8e-122 442.6 334 61.1
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 2.8e-122 442.6 338 62.7
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 8.2e-122 441.0 339 59.3
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 1.1e-121 440.7 337 60.2
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 1.8e-121 439.9 337 62.9
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 6.9e-121 438.0 336 61.9
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 9.0e-121 437.6 336 61.3
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.5e-120 436.8 336 61.6
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 2.0e-120 436.4 343 63.0
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 4.5e-120 435.3 382 56.5
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.2e-119 433.0 336 61.3
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.4e-118 430.3 336 61.0
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.5e-118 429.5 336 60.4
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 2.5e-118 429.5 345 59.1
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 7.2e-118 427.9 346 59.2
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 1.2e-117 427.2 340 60.6
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 2.1e-117 426.4 367 56.4
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 6.7e-116 421.4 336 60.1
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 2.0e-112 409.8 344 59.3
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 5.9e-112 408.3 335 57.9
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 1.7e-111 406.8 334 58.7
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 5.0e-111 405.2 381 53.8
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 1.2e-109 400.6 344 55.5
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 6.1e-109 398.3 294 63.6
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 1.8e-108 396.7 338 56.5
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 3.0e-108 396.0 338 55.9
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 5.7e-107 391.7 342 57.6
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 8.2e-106 387.9 340 56.5
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 2.4e-105 386.3 436 47.2
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 3.4e-104 382.5 343 56.9
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 2.9e-103 379.4 335 54.6
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 2.0e-99 366.7 263 66.9
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 2.8e-98 362.8 349 53.9
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 1.3e-95 354.0 338 50.9
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 4.4e-91 339.0 257 61.5
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 1.7e-90 337.0 258 61.2
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 4.1e-81 305.8 229 60.7
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 6.8e-76 288.5 193 70.5
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.0e-75 287.0 183 73.2
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 7.3e-70 268.5 340 39.4
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 6.1e-69 265.4 344 37.5
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 9.5e-62 241.5 349 38.4
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.6e-59 233.4 205 57.6
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 5.6e-46 189.1 200 50.0
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 2.1e-45 187.2 179 54.2
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 3.4e-43 179.9 264 36.0
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 4.9e-42 176.0 186 49.5
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.9e-41 174.1 166 58.4
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.6e-37 161.0 184 47.3
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.3e-34 151.4 207 41.5
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 9.3e-25 118.6 81 64.2
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.2e-19 101.7 129 39.5
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.1e-16 90.9 60 68.3
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.1e-16 90.9 60 68.3
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.1e-16 90.9 60 68.3
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 1.8e-15 87.8 60 66.7
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 2.3e-15 87.4 107 40.2
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.6e-13 81.3 109 41.3
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.4e-12 78.2 76 51.3
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.4e-12 78.2 76 51.3
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 9.0e-12 75.5 80 47.5
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 2.0e-11 74.3 80 47.5
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 3.4e-11 73.6 80 46.2
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 4.6e-08 63.2 60 53.3
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.6e-08 63.2 69 46.4
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 4.6e-08 63.2 59 50.8


User provided reference genes

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