Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 1.2e-146 523.1 251 100.0
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 2.6e-133 478.8 253 92.9
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 3.3e-104 382.1 251 73.3
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 1.6e-103 379.8 254 72.8
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 2.8e-103 379.0 254 72.8
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 3.6e-103 378.6 254 72.4
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 6.2e-103 377.9 250 72.0
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 1.8e-102 376.3 252 72.6
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 3.1e-102 375.6 234 76.1
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 7.6e-101 370.9 252 71.8
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 2.2e-100 369.4 249 71.9
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 2.9e-100 369.0 255 70.2
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 6.4e-100 367.9 256 68.8
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 8.4e-100 367.5 236 71.6
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 8.4e-100 367.5 245 70.6
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 1.9e-99 366.3 250 69.6
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 1.9e-99 366.3 246 70.3
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 3.2e-99 365.5 258 70.2
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 3.2e-99 365.5 251 70.1
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 5.4e-99 364.8 255 69.0
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 9.3e-99 364.0 247 70.0
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 1.6e-98 363.2 256 69.5
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 2.7e-98 362.5 232 72.8
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 3.5e-98 362.1 251 69.3
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 1.3e-97 360.1 255 68.6
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 2.3e-97 359.4 255 69.0
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 3.0e-97 359.0 230 73.9
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 8.7e-97 357.5 253 69.2
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 1.1e-96 357.1 232 69.4
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 4.3e-96 355.1 254 65.7
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 3.6e-95 352.1 258 67.1
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 1.4e-94 350.1 223 71.3
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 2.4e-94 349.4 263 65.8
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 2.4e-94 349.4 265 64.9
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 3.1e-94 349.0 229 70.7
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 5.3e-94 348.2 249 68.7
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 5.3e-94 348.2 258 66.7
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 6.9e-94 347.8 255 65.5
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 1.2e-93 347.1 222 70.7
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 1.2e-93 347.1 246 66.3
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 2.0e-93 346.3 232 68.5
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 2.6e-93 345.9 234 67.9
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 5.8e-93 344.7 274 63.1
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 9.9e-93 344.0 254 66.9
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 2.9e-92 342.4 285 61.8
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 4.9e-92 341.7 247 65.2
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 6.4e-92 341.3 245 66.5
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 8.4e-92 340.9 232 67.7
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 8.4e-92 340.9 250 68.0
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 1.9e-91 339.7 229 69.9
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 2.4e-91 339.3 255 65.1
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 3.2e-91 339.0 253 66.8
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 3.2e-91 339.0 264 62.5
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 5.4e-91 338.2 250 64.0
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 9.3e-91 337.4 224 70.5
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 9.3e-91 337.4 262 62.6
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 1.6e-90 336.7 229 67.2
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 2.7e-90 335.9 223 69.5
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 4.6e-90 335.1 250 64.8
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 6.0e-90 334.7 232 68.1
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 7.9e-90 334.3 229 66.8
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 7.9e-90 334.3 223 70.0
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 7.9e-90 334.3 262 62.2
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 1.0e-89 334.0 246 63.8
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 2.3e-89 332.8 253 64.0
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 3.9e-89 332.0 251 62.5
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 3.9e-89 332.0 256 63.7
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 3.9e-89 332.0 223 68.6
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 1.5e-88 330.1 251 62.5
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 1.5e-88 330.1 246 66.3
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 2.5e-88 329.3 249 62.7
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 2.5e-88 329.3 251 62.2
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 2.5e-88 329.3 260 63.5
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 3.3e-88 328.9 240 65.0
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 4.3e-88 328.6 247 64.4
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 1.6e-87 326.6 230 65.2
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 1.6e-87 326.6 230 65.2
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 2.8e-87 325.9 251 61.8
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 3.6e-87 325.5 233 65.7
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 3.6e-87 325.5 229 65.9
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 4.0e-86 322.0 232 64.2
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 4.0e-86 322.0 246 63.8
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 6.9e-86 321.2 233 63.9
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 7.6e-85 317.8 229 65.1
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 9.9e-85 317.4 249 63.1
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 1.7e-84 316.6 206 69.4
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 1.9e-80 303.1 232 62.5
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 3.3e-80 302.4 225 64.9
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 1.3e-79 300.4 187 75.4
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 2.4e-78 296.2 241 60.6
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 3.4e-77 292.4 253 57.7
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 1.0e-76 290.8 201 68.2
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 1.8e-73 280.0 251 52.6
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 2.3e-73 279.6 230 57.8
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 2.5e-72 276.2 234 54.3
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 9.6e-72 274.2 223 57.8
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 9.6e-72 274.2 226 56.2
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 8.7e-65 251.1 233 55.8
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 6.3e-63 245.0 148 75.7
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 8.2e-63 244.6 189 61.4
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 7.2e-59 231.5 199 59.8
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 7.9e-58 228.0 241 48.1
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 7.4e-56 221.5 242 46.7
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 6.9e-54 214.9 163 63.2
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 2.1e-50 203.4 148 68.2
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 6.7e-49 198.4 236 48.7
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 4.1e-46 189.1 215 49.8
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 4.7e-42 175.6 266 39.8
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 3.1e-38 162.9 144 51.4
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 2.0e-37 160.2 212 40.6
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 1.7e-36 157.1 89 79.8
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 2.2e-31 140.2 96 72.9
SEGI_17138 Sequoiadendron giganteum HOM05D006195 ORTHO05D007710 3.6e-26 122.9 80 63.8
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.4e-25 120.9 69 79.7
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.4e-25 120.9 69 79.7
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.4e-25 120.9 69 79.7
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 1.5e-24 117.5 70 74.3
HPP92_018063 Vanilla planifolia HOM05D006195 ORTHO05D007710 9.2e-22 108.2 132 43.2
Nn1g03899 Nelumbo nucifera HOM05D006195 ORTHO05D007710 7.3e-19 98.6 110 49.1
AL117U10020 Arabidopsis lyrata HOM05D064442 ORTHO05D011622 4.7e-18 95.9 72 58.3
SHI02124 Sapria himalayana HOM05D006195 ORTHO05D007710 8.9e-17 91.7 228 33.8
PRCOL_00004057 Prasinoderma coloniale HOM05D006195 ORTHO05D007710 7.0e-14 82.0 193 27.5
CSS0013325 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 8.9e-09 65.1 73 45.2


User provided reference genes

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