Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01353 Eucalyptus grandis HOM05D008698 ORTHO05D010072 1.3e-56 223.4 163 100.0
Eucgr.D01072 Eucalyptus grandis HOM05D008698 ORTHO05D010072 4.5e-54 214.9 163 96.3
Eucgr.L01355 Eucalyptus grandis HOM05D008698 ORTHO05D010072 2.3e-21 106.3 131 77.1
PGR083G1635 Punica granatum HOM05D008698 ORTHO05D010072 1.3e-16 90.5 74 77.0
Rhsim03G0068200 Rhododendron simsii HOM05D008698 ORTHO05D010072 1.9e-12 76.6 77 72.7
vmacro21117 Vaccinium macrocarpon HOM05D008698 ORTHO05D010072 4.7e-11 72.0 77 70.1
Dinv43522 Davidia involucrata HOM05D008698 ORTHO05D010072 6.2e-11 71.6 80 70.0
GSVIVG01019304001 Vitis vinifera HOM05D008698 ORTHO05D010072 2.3e-10 69.7 83 59.0
Carub.0006s1589 Capsella rubella HOM05D010517 ORTHO05D010072 6.8e-10 68.2 112 62.5
Oeu054159.1 Olea europaea HOM05D008698 ORTHO05D010072 6.8e-10 68.2 78 67.9
Thecc.05G234300 Theobroma cacao HOM05D008698 ORTHO05D010072 1.2e-09 67.4 79 64.6
CiPaw.02G047000 Carya illinoinensis HOM05D008698 ORTHO05D010072 2.0e-09 66.6 80 63.8
Dinv43963 Davidia involucrata HOM05D008698 ORTHO05D010072 2.0e-09 66.6 77 64.9
Duzib128G0528 Durio zibethinus HOM05D008698 ORTHO05D010072 9.8e-09 64.3 79 58.2
BcaB08g36755 Brassica carinata HOM05D010517 ORTHO05D010072 1.3e-08 63.9 77 64.9
Ah.05g177120 Amaranthus hybridus HOM05D008698 ORTHO05D010072 4.9e-08 62.0 66 60.6
Eucgr.D01077 Eucalyptus grandis HOM05D008698 ORTHO05D010072 6.4e-08 61.6 176 56.2
Gohir.A11G224226 Gossypium hirsutum HOM05D008698 ORTHO05D010072 6.4e-08 61.6 78 60.3
Glyma.07G122400 Glycine max HOM05D015382 ORTHO05D019009 8.3e-08 61.2 75 53.3
Nn1g09348 Nelumbo nucifera HOM05D008698 ORTHO05D010072 1.1e-07 60.8 79 64.6
Actinidia31735 Actinidia chinensis HOM05D008698 ORTHO05D010072 1.4e-07 60.5 58 72.4
AL6G28740 Arabidopsis lyrata HOM05D010517 ORTHO05D010072 1.9e-07 60.1 74 64.9
HanXRQChr07g0198711 Helianthus annuus HOM05D013051 ORTHO05D010071 3.2e-07 59.3 85 49.4
Sed0010525 Sechium edule HOM05D023437 ORTHO05D010072 4.1e-07 58.9 67 56.7
Actinidia20018 Actinidia chinensis HOM05D020756 ORTHO05D010072 5.4e-07 58.5 75 65.3
CANSAT25G0609 Cannabis sativa HOM05D015382 ORTHO05D010072 5.4e-07 58.5 67 64.2
TAR375G0911 Trochodendron aralioides HOM05D008698 ORTHO05D010072 5.4e-07 58.5 61 70.5
BcaC04g18771 Brassica carinata HOM05D010517 ORTHO05D010072 1.2e-06 57.4 146 53.4
BraA10t44236Z Brassica rapa HOM05D010517 ORTHO05D010072 2.1e-06 56.6 86 47.7
HanXRQChr04g0117701 Helianthus annuus HOM05D018323 ORTHO05D010072 2.7e-06 56.2 68 63.2
A10p21750 Brassica napus HOM05D010517 ORTHO05D010072 3.5e-06 55.8 76 63.2
QL04p053348 Quercus lobata HOM05D008698 ORTHO05D010072 3.5e-06 55.8 79 57.0
Actinidia01252 Actinidia chinensis HOM05D016621 ORTHO05D010071 4.6e-06 55.5 91 45.1
CSS0001446 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 6.0e-06 55.1 74 66.2
Cc05_g03920 Coffea canephora HOM05D008698 ORTHO05D010072 6.0e-06 55.1 84 56.0
HanXRQChr01g0017411 Helianthus annuus HOM05D008698 ORTHO05D010072 7.8e-06 54.7 87 52.9
Sabra13G0061800 Salix brachista HOM05D008698 ORTHO05D010072 7.8e-06 54.7 88 54.5


User provided reference genes

Program Settings