Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 7.5e-107 390.6 205 100.0
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 2.4e-84 315.8 197 89.3
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.0e-63 245.7 175 81.1
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 2.9e-34 149.4 133 64.7
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 2.5e-33 146.4 181 50.3
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 4.0e-31 139.0 179 50.8
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 1.2e-30 137.5 155 56.8
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.3e-30 136.0 169 50.3
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 5.7e-30 135.2 176 47.7
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 9.7e-30 134.4 190 50.0
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 1.7e-29 133.7 125 59.2
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 3.7e-29 132.5 182 48.4
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 3.7e-29 132.5 127 62.2
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 4.8e-29 132.1 135 59.3
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 8.2e-29 131.3 186 44.6
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 1.1e-28 131.0 113 61.9
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 1.1e-28 131.0 132 58.3
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 1.4e-28 130.6 135 58.5
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 2.4e-28 129.8 125 59.2
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 2.4e-28 129.8 124 60.5
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 3.1e-28 129.4 133 57.9
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 5.3e-28 128.6 123 61.8
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 7.0e-28 128.3 125 58.4
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 1.2e-27 127.5 177 45.8
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 2.0e-27 126.7 129 58.1
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 3.5e-27 125.9 133 57.1
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 3.5e-27 125.9 133 58.6
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 3.5e-27 125.9 147 50.3
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 3.5e-27 125.9 126 58.7
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 4.5e-27 125.6 123 63.4
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 5.9e-27 125.2 173 46.2
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 7.7e-27 124.8 134 53.0
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 7.7e-27 124.8 128 57.8
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.3e-26 124.0 152 53.9
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 1.3e-26 124.0 176 47.7
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 1.7e-26 123.6 123 60.2
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 1.7e-26 123.6 90 70.0
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 1.7e-26 123.6 102 65.7
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 2.2e-26 123.2 88 73.9
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 2.2e-26 123.2 121 55.4
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 3.8e-26 122.5 118 59.3
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 3.8e-26 122.5 118 59.3
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 3.8e-26 122.5 118 59.3
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 3.8e-26 122.5 124 59.7
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 5.0e-26 122.1 120 60.0
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 5.0e-26 122.1 170 46.5
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 6.5e-26 121.7 91 69.2
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 8.5e-26 121.3 187 47.6
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 8.5e-26 121.3 123 56.9
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 1.1e-25 120.9 189 46.6
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 1.1e-25 120.9 126 54.8
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 1.9e-25 120.2 127 53.5
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 2.5e-25 119.8 141 54.6
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 3.2e-25 119.4 118 57.6
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 3.2e-25 119.4 118 57.6
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 3.2e-25 119.4 81 74.1
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 3.2e-25 119.4 130 55.4
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 4.2e-25 119.0 129 55.8
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 5.5e-25 118.6 119 58.8
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 5.5e-25 118.6 119 58.8
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 7.2e-25 118.2 130 54.6
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 1.2e-24 117.5 86 68.6
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 1.6e-24 117.1 130 55.4
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 2.1e-24 116.7 101 64.4
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 2.7e-24 116.3 164 47.6
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 2.7e-24 116.3 164 48.2
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 2.7e-24 116.3 177 44.1
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 2.7e-24 116.3 96 64.6
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 3.6e-24 115.9 95 66.3
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 4.7e-24 115.5 164 47.6
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 4.7e-24 115.5 164 47.6
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 4.7e-24 115.5 95 66.3
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 6.1e-24 115.2 126 56.3
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 8.0e-24 114.8 91 67.0
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 8.0e-24 114.8 130 53.8
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 1.0e-23 114.4 133 53.4
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 3.0e-23 112.8 129 55.0
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 4.0e-23 112.5 128 52.3
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 4.0e-23 112.5 93 63.4
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 8.8e-23 111.3 145 46.2
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 8.8e-23 111.3 147 46.3
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 2.6e-22 109.8 132 50.8
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 3.4e-22 109.4 103 63.1
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 5.7e-22 108.6 71 74.6
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 1.3e-21 107.5 76 73.7
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 2.8e-21 106.3 145 46.2
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 4.8e-21 105.5 75 72.0
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 8.3e-21 104.8 94 58.5
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 2.4e-20 103.2 68 75.0
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.2e-19 100.9 88 62.5
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 4.5e-19 99.0 162 42.6
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 5.9e-19 98.6 85 63.5
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 5.9e-19 98.6 115 49.6
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 1.0e-18 97.8 105 54.3
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 1.0e-18 97.8 121 52.1
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 5.0e-18 95.5 84 58.3
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.5e-17 94.0 66 68.2
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 2.8e-16 89.7 60 70.0
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 2.2e-13 80.1 142 39.4
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 4.9e-13 79.0 61 63.9
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 5.0e-10 68.9 51 66.7
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 7.3e-09 65.1 111 41.4
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 2.1e-08 63.5 106 43.4
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 2.3e-07 60.1 137 38.0
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 2.6e-06 56.6 142 34.5


User provided reference genes

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