Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 5.0e-37 157.5 96 100.0
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 4.0e-34 147.9 95 95.8
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.0e-33 145.6 95 95.8
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 2.4e-23 112.1 68 76.5
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 3.2e-23 111.7 68 76.5
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 7.1e-23 110.5 68 76.5
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 1.2e-22 109.8 68 75.0
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 1.6e-22 109.4 93 74.2
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 4.6e-22 107.8 87 77.0
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 4.6e-22 107.8 68 73.5
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 2.3e-21 105.5 67 74.6
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 2.3e-21 105.5 67 73.1
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 2.3e-21 105.5 68 72.1
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 3.0e-21 105.1 67 74.6
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 6.6e-21 104.0 68 73.5
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 6.6e-21 104.0 65 72.3
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 6.6e-21 104.0 68 73.5
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 8.6e-21 103.6 68 70.6
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.9e-20 102.4 92 58.7
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 5.6e-20 100.9 68 70.6
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 9.5e-20 100.1 95 64.2
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 9.5e-20 100.1 68 72.1
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.2e-19 99.8 67 73.1
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 1.6e-19 99.4 71 70.4
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.1e-19 99.0 65 69.2
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 2.8e-19 98.6 71 67.6
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 3.6e-19 98.2 95 61.1
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 4.7e-19 97.8 68 67.6
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 4.7e-19 97.8 89 64.0
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 4.7e-19 97.8 68 67.6
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 6.2e-19 97.4 67 68.7
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 8.1e-19 97.1 68 70.6
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 8.1e-19 97.1 65 67.7
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 2.3e-18 95.5 63 69.8
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 3.1e-18 95.1 95 65.3
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 3.1e-18 95.1 95 64.2
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.0e-18 94.7 66 65.2
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 4.0e-18 94.7 67 65.7
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 4.0e-18 94.7 67 65.7
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 6.8e-18 94.0 65 66.2
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 2.0e-17 92.4 68 64.7
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.6e-17 92.0 67 64.2
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.4e-17 91.7 68 66.2
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 5.8e-17 90.9 67 64.2
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 7.6e-17 90.5 62 67.7
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.3e-16 89.7 64 65.6
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.7e-16 89.4 68 61.8
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 2.2e-16 89.0 58 74.1
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.7e-16 88.2 67 64.2
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 4.9e-16 87.8 67 61.2
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 4.9e-16 87.8 92 63.0
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 4.9e-16 87.8 67 61.2
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 1.1e-15 86.7 66 62.1
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 3.2e-15 85.1 57 68.4
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 3.2e-15 85.1 92 58.7
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 4.1e-15 84.7 68 63.2
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 5.4e-15 84.3 66 65.2
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 7.1e-15 84.0 67 62.7
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 9.2e-15 83.6 67 62.7
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 9.2e-15 83.6 68 64.7
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 9.2e-15 83.6 58 67.2
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 1.6e-14 82.8 65 63.1
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 2.7e-14 82.0 58 62.1
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 3.5e-14 81.6 67 59.7
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 4.6e-14 81.3 65 61.5
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 4.6e-14 81.3 62 62.9
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 4.6e-14 81.3 62 62.9
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 7.8e-14 80.5 68 58.8
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.3e-13 79.7 66 62.1
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 1.7e-13 79.3 67 58.2
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 1.7e-13 79.3 50 70.0
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 1.7e-13 79.3 66 62.1
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 1.7e-13 79.3 70 62.9
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 2.3e-13 79.0 92 55.4
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 2.3e-13 79.0 68 60.3
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 3.0e-13 78.6 66 60.6
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 3.0e-13 78.6 66 62.1
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 3.0e-13 78.6 67 64.2
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 3.9e-13 78.2 69 58.0
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 5.1e-13 77.8 66 59.1
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 6.6e-13 77.4 68 55.9
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 8.6e-13 77.0 67 62.7
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 1.1e-12 76.6 68 55.9
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 1.1e-12 76.6 68 57.4
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.5e-12 76.3 65 58.5
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 1.5e-12 76.3 68 55.9
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.5e-12 76.3 68 55.9
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 2.5e-12 75.5 67 61.2
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 4.3e-12 74.7 66 57.6
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 4.3e-12 74.7 66 57.6
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 4.3e-12 74.7 66 57.6
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 4.3e-12 74.7 66 57.6
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 4.3e-12 74.7 68 57.4
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 5.6e-12 74.3 69 58.0
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 5.6e-12 74.3 72 56.9
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 5.6e-12 74.3 48 66.7
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 7.3e-12 73.9 66 57.6
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 9.6e-12 73.6 67 53.7
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.2e-11 73.2 69 55.1
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 1.2e-11 73.2 72 56.9
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 1.6e-11 72.8 68 54.4
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 1.6e-11 72.8 95 45.3
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 2.1e-11 72.4 69 56.5
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 2.8e-11 72.0 72 55.6
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 8.1e-11 70.5 67 55.2
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 8.1e-11 70.5 68 58.8
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 8.1e-11 70.5 68 54.4
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 1.1e-10 70.1 67 53.7
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 1.4e-10 69.7 49 65.3
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.8e-10 69.3 37 94.6
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 2.4e-10 68.9 70 54.3
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 8.9e-10 67.0 44 68.2
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 8.9e-10 67.0 44 68.2
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 8.9e-10 67.0 62 51.6
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 8.9e-10 67.0 62 51.6
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 1.5e-09 66.2 62 51.6
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 2.6e-09 65.5 66 53.0
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 7.6e-09 63.9 39 74.4
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 2.9e-08 62.0 40 70.0
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 3.2e-07 58.5 60 53.3
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 7.1e-07 57.4 34 76.5


User provided reference genes

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