Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 3.7e-117 424.9 213 100.0
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 3.9e-58 228.8 205 64.9
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 3.7e-56 222.2 204 63.2
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 2.2e-37 159.8 211 47.9
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 3.2e-36 156.0 210 46.7
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 4.2e-36 155.6 196 49.0
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 5.5e-36 155.2 202 45.5
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 9.4e-36 154.5 201 45.3
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 3.6e-35 152.5 195 46.7
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 6.1e-35 151.8 196 48.0
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 2.3e-34 149.8 204 42.6
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 2.3e-34 149.8 211 43.1
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 3.0e-34 149.4 220 43.2
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 8.8e-34 147.9 218 43.6
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 1.2e-33 147.5 200 46.0
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 3.4e-33 146.0 199 46.2
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 9.8e-33 144.4 201 44.3
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 1.7e-32 143.7 202 44.1
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 2.2e-32 143.3 208 43.8
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 5.4e-31 138.7 196 43.4
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 2.0e-30 136.7 198 42.9
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 2.0e-30 136.7 200 42.5
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 3.5e-30 136.0 204 42.6
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 4.5e-30 135.6 220 41.8
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 7.7e-30 134.8 204 43.1
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.0e-29 134.4 204 43.1
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 1.3e-29 134.0 204 42.2
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.3e-29 134.0 204 43.1
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 2.3e-29 133.3 189 42.3
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 5.0e-29 132.1 197 40.6
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.5e-28 130.6 69 95.7
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 1.5e-28 130.6 216 39.8
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 2.5e-28 129.8 198 42.9
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 3.3e-28 129.4 194 42.3
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 5.6e-28 128.6 197 44.7
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 5.6e-28 128.6 226 38.5
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 7.3e-28 128.3 216 39.4
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 9.5e-28 127.9 204 42.2
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 2.1e-27 126.7 189 45.5
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 2.8e-27 126.3 217 39.6
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 4.7e-27 125.6 193 40.9
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 6.1e-27 125.2 192 41.7
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 6.1e-27 125.2 188 41.5
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 1.0e-26 124.4 181 42.5
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 1.4e-26 124.0 200 41.0
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 1.8e-26 123.6 211 40.3
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 1.8e-26 123.6 204 38.7
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 2.3e-26 123.2 192 41.1
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 3.0e-26 122.9 194 41.2
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 4.0e-26 122.5 189 41.3
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 8.9e-26 121.3 204 40.2
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 1.5e-25 120.6 200 41.0
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 2.0e-25 120.2 196 41.8
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 2.6e-25 119.8 204 40.2
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 2.6e-25 119.8 202 42.1
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 3.4e-25 119.4 189 42.9
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 9.8e-25 117.9 200 40.0
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 1.3e-24 117.5 199 42.7
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 2.2e-24 116.7 189 42.3
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 2.2e-24 116.7 188 43.1
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 2.9e-24 116.3 220 38.6
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 4.9e-24 115.5 204 38.7
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 4.9e-24 115.5 199 38.7
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 6.4e-24 115.2 190 39.5
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 1.8e-23 113.6 196 39.3
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 3.2e-23 112.8 163 42.9
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 3.2e-23 112.8 191 40.3
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 4.1e-23 112.5 165 41.2
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 5.4e-23 112.1 186 41.4
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 7.0e-23 111.7 280 32.1
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 1.6e-22 110.5 214 37.9
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 1.6e-22 110.5 199 37.2
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 1.6e-22 110.5 187 43.3
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 3.5e-22 109.4 195 41.5
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 4.6e-22 109.0 202 38.6
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 5.9e-22 108.6 198 37.9
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 7.8e-22 108.2 210 40.0
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 1.3e-21 107.5 210 39.5
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.7e-21 107.1 202 37.1
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 5.0e-21 105.5 197 39.6
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 5.0e-21 105.5 202 37.6
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 8.6e-21 104.8 201 36.8
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 8.6e-21 104.8 197 38.6
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 1.1e-20 104.4 202 37.6
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 1.1e-20 104.4 195 39.0
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 1.5e-20 104.0 201 36.8
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 1.5e-20 104.0 186 41.4
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.9e-20 103.6 202 36.6
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 7.3e-20 101.7 206 37.9
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 9.5e-20 101.3 219 36.5
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 1.2e-19 100.9 192 37.0
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 1.6e-19 100.5 208 36.1
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 4.7e-19 99.0 222 34.7
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 6.2e-19 98.6 208 35.6
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 6.2e-19 98.6 207 35.3
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 1.4e-18 97.4 196 35.7
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 1.4e-18 97.4 212 34.4
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 8.9e-18 94.7 154 40.9
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 2.6e-17 93.2 195 32.8
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 1.7e-16 90.5 197 32.5
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 2.2e-16 90.1 157 40.1
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 3.7e-16 89.4 48 91.7
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 1.6e-14 84.0 197 34.0
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 5.6e-12 75.5 62 67.7
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 9.5e-12 74.7 74 52.7
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 2.1e-11 73.6 58 60.3
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 4.7e-11 72.4 56 64.3
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 4.7e-11 72.4 71 52.1
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 6.2e-11 72.0 197 29.4
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 2.3e-10 70.1 194 33.5
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 4.0e-10 69.3 59 61.0
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 1.5e-09 67.4 73 53.4
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 7.5e-09 65.1 193 31.6
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 1.2e-06 57.8 45 60.0
SHI17433 Sapria himalayana HOM05D005563 ORTHO05D006667 1.6e-06 57.4 60 45.0
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 4.6e-06 55.8 60 48.3
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 6.0e-06 55.5 72 41.7


User provided reference genes

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