Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.7e-51 204.5 99 100.0
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.4e-34 148.7 96 70.8
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.0e-25 119.0 94 60.6
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.6e-22 109.4 94 58.5
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.7e-22 107.8 94 55.3
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 7.0e-18 94.0 94 45.7
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 6.0e-17 90.9 89 47.2
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 6.0e-17 90.9 98 44.9
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 6.0e-17 90.9 95 46.3
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 1.0e-16 90.1 94 46.8
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 2.3e-16 89.0 85 51.8
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 2.3e-16 89.0 91 48.4
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 3.0e-16 88.6 98 43.9
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 3.9e-16 88.2 88 45.5
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 6.6e-16 87.4 85 48.2
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 6.6e-16 87.4 88 48.9
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.1e-15 86.7 85 49.4
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.1e-15 86.7 85 50.6
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.1e-15 86.7 85 50.6
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 1.5e-15 86.3 82 51.2
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.9e-15 85.9 88 47.7
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 1.9e-15 85.9 90 44.4
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 2.5e-15 85.5 78 52.6
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 3.3e-15 85.1 85 47.1
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 3.3e-15 85.1 86 45.3
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 3.3e-15 85.1 93 43.0
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 3.3e-15 85.1 95 47.4
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 4.3e-15 84.7 98 41.8
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 4.3e-15 84.7 89 46.1
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 4.3e-15 84.7 89 44.9
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 5.6e-15 84.3 79 48.1
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 7.3e-15 84.0 79 46.8
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 7.3e-15 84.0 79 46.8
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 7.3e-15 84.0 91 46.2
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.2e-14 83.2 86 44.2
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.6e-14 82.8 98 40.8
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.6e-14 82.8 98 40.8
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.6e-14 82.8 94 43.6
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 1.6e-14 82.8 88 44.3
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 2.8e-14 82.0 74 52.7
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.8e-14 82.0 81 48.1
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.6e-14 81.6 89 48.3
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 4.7e-14 81.3 81 46.9
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.2e-14 80.9 76 48.7
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 1.1e-13 80.1 86 45.3
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 1.4e-13 79.7 98 38.8
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.8e-13 79.3 86 43.0
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 2.3e-13 79.0 91 42.9
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 2.3e-13 79.0 65 55.4
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 3.1e-13 78.6 100 42.0
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 3.1e-13 78.6 71 52.1
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 3.1e-13 78.6 78 47.4
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 4.0e-13 78.2 78 46.2
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 5.2e-13 77.8 95 42.1
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.8e-13 77.4 71 53.5
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.2e-12 76.6 71 53.5
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.5e-12 76.3 78 50.0
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 1.5e-12 76.3 89 43.8
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.5e-12 76.3 82 45.1
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 2.6e-12 75.5 94 38.3
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 2.6e-12 75.5 89 42.7
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 3.4e-12 75.1 82 43.9
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.5e-12 73.9 80 48.8
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 7.5e-12 73.9 86 43.0
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 9.9e-12 73.6 67 55.2
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 9.9e-12 73.6 86 43.0
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 1.3e-11 73.2 62 54.8
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 1.3e-11 73.2 92 39.1
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.3e-11 73.2 89 37.1
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 1.3e-11 73.2 87 40.2
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.7e-11 72.8 97 42.3
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.7e-11 72.8 97 42.3
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 2.9e-11 72.0 89 36.0
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 3.7e-11 71.6 98 36.7
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 3.7e-11 71.6 76 44.7
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 4.9e-11 71.2 88 44.3
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 6.4e-11 70.9 79 40.5
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 6.4e-11 70.9 89 41.6
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.1e-10 70.1 94 38.3
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.4e-10 68.9 85 38.8
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.2e-09 66.6 102 40.2
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.7e-09 65.5 62 50.0
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 6.0e-09 64.3 62 51.6
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 7.8e-09 63.9 71 43.7
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 2.3e-08 62.4 52 53.8
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 3.0e-08 62.0 73 43.8
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.1e-08 61.2 62 50.0
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 5.1e-08 61.2 85 37.6
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 5.1e-08 61.2 62 50.0
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 8.6e-08 60.5 56 51.8
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.3e-07 58.2 62 46.8
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 9.5e-07 57.0 91 35.2
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 8.1e-06 53.9 74 41.9


User provided reference genes

Program Settings