Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00647 Eucalyptus grandis HOM05D000002 ORTHO05D000001 9.0e-69 263.5 133 100.0
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.1e-18 97.1 111 41.4
Atru.chr4.1289 Acer truncatum HOM05D000002 ORTHO05D000001 2.1e-17 92.8 109 47.7
Prupe.4G230800 Prunus persica HOM05D000002 ORTHO05D000001 2.1e-17 92.8 119 41.2
TWI59G0793 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.1e-17 92.8 114 43.0
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 3.6e-17 92.0 114 42.1
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 8.0e-17 90.9 111 41.4
Eucgr.H00940 Eucalyptus grandis HOM05D000002 ORTHO05D000001 2.3e-16 89.4 104 46.2
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-16 89.0 107 39.3
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.0e-16 89.0 180 32.2
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.2e-16 88.2 114 37.7
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 8.9e-16 87.4 103 43.7
Hma1.2p1_0577F.1_g182200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.0e-15 86.3 111 41.4
Ciclev10006756m.g Citrus clementina HOM05D047940 ORTHO05D000001 2.6e-15 85.9 90 47.8
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-15 85.9 104 46.2
COL.COLO4_37640 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.4e-15 85.5 113 40.7
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 9.8e-15 84.0 108 40.7
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 9.8e-15 84.0 108 40.7
Psat5g305960 Pisum sativum HOM05D000002 ORTHO05D000001 2.2e-14 82.8 138 31.9
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.8e-14 82.4 131 35.9
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.8e-14 82.4 108 40.7
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.3e-14 81.3 114 37.7
Duzib235G0480 Durio zibethinus HOM05D000002 ORTHO05D000001 1.8e-13 79.7 103 40.8
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 2.4e-13 79.3 111 36.9
VMungo0540G0563 Vigna mungo HOM05D000002 ORTHO05D000001 4.1e-13 78.6 113 35.4
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 9.2e-13 77.4 126 30.2
Migut.E01660 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.2e-12 77.0 136 30.9
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.6e-12 76.6 130 33.8
COL.COLO4_38540 Corchorus olitorius HOM05D026776 ORTHO05D000001 1.6e-12 76.6 100 39.0
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.0e-12 76.3 101 37.6
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 2.7e-12 75.9 110 34.5
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 4.5e-12 75.1 111 33.3
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 5.9e-12 74.7 105 36.2
ECA233G4466 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-12 74.3 106 34.9
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-12 74.3 111 33.3
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-12 74.3 111 33.3
Gorai.013G092800 Gossypium raimondii HOM05D000002 ORTHO05D000001 1.0e-11 73.9 108 38.0
Hma1.2p1_0240F.1_g100250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-11 73.6 98 40.8
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-11 73.6 111 32.4
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 2.9e-11 72.4 110 32.7
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 5.0e-11 71.6 108 37.0
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 5.0e-11 71.6 110 34.5
Eucgr.E02344 Eucalyptus grandis HOM05D000002 ORTHO05D000001 6.6e-11 71.2 92 43.5
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 6.6e-11 71.2 143 29.4
Psat7g227320 Pisum sativum HOM05D000002 ORTHO05D000001 6.6e-11 71.2 143 28.7
Actinidia05383 Actinidia chinensis HOM05D000002 ORTHO05D000001 1.1e-10 70.5 111 33.3
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-10 70.5 102 37.3
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-10 70.5 102 37.3
Nitab4.5_0000485g0090 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.1e-10 70.5 113 31.9
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 2.5e-10 69.3 136 30.9
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-10 68.9 113 30.1
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.3e-10 68.9 109 32.1
Eucgr.F02352 Eucalyptus grandis HOM05D000002 ORTHO05D000001 3.3e-10 68.9 113 38.1
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.3e-10 68.6 111 31.5
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.3e-10 68.6 109 33.9
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.5e-10 67.4 104 36.5
ECA240G0216 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.2e-09 67.0 113 31.9
Hma1.2p1_0763F.1_g214730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-09 67.0 103 35.0
Solyc02g030370.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.2e-09 67.0 118 32.2
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.6e-09 66.6 124 35.5
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-09 66.6 111 29.7
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-09 66.2 110 29.1
Sopen08g005830 Solanum pennellii HOM05D001396 ORTHO05D000001 2.8e-09 65.9 111 30.6
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-09 65.5 113 31.0
Peaxi162Scf00153g01013 Petunia axillaris HOM05D000002 ORTHO05D000001 3.6e-09 65.5 96 30.2
Atru.chr6.358 Acer truncatum HOM05D000002 ORTHO05D000001 4.7e-09 65.1 108 31.5
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 4.7e-09 65.1 105 31.4
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 4.7e-09 65.1 105 30.5
Atru.chr6.1164 Acer truncatum HOM05D000002 ORTHO05D000001 6.1e-09 64.7 78 41.0
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 8.0e-09 64.3 103 34.0
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.0e-09 64.3 111 31.5
Peaxi162Scf00168g01729 Petunia axillaris HOM05D000002 ORTHO05D000001 8.0e-09 64.3 111 30.6
Atru.chr6.233 Acer truncatum HOM05D000002 ORTHO05D000001 1.0e-08 63.9 108 32.4
COL.COLO4_16378 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.0e-08 63.9 94 36.2
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 1.0e-08 63.9 102 30.4
Sopen01g029710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-08 63.9 111 35.1
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-08 63.2 110 30.0
Rhsim10G0160500 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.8e-08 63.2 125 32.0
Psat7g134120 Pisum sativum HOM05D000002 ORTHO05D000001 2.3e-08 62.8 89 38.2
Peaxi162Scf00063g00071 Petunia axillaris HOM05D000002 ORTHO05D000001 3.1e-08 62.4 111 29.7
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 3.1e-08 62.4 107 29.9
Migut.J01156 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.0e-08 62.0 129 28.7
HanXRQChr15g0476521 Helianthus annuus HOM05D000002 ORTHO05D000001 4.0e-08 62.0 109 30.3
ECA234G2692 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-08 61.2 112 35.7
ECA236G2445 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.8e-08 61.2 111 27.9
Migut.E01000 Erythranthe guttata HOM05D000002 ORTHO05D000001 8.9e-08 60.8 109 29.4
Atru.chr13.1786 Acer truncatum HOM05D000002 ORTHO05D000001 1.2e-07 60.5 108 29.6
Sopen08g005850 Solanum pennellii HOM05D001396 ORTHO05D000001 1.2e-07 60.5 114 27.2
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-07 60.1 103 31.1
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.5e-07 60.1 105 32.4
Peaxi162Scf00203g00072 Petunia axillaris HOM05D000002 ORTHO05D000001 1.5e-07 60.1 111 28.8
Psat1g116320 Pisum sativum HOM05D000002 ORTHO05D000001 2.0e-07 59.7 112 31.2
Psat4g122360 Pisum sativum HOM05D000002 ORTHO05D000001 2.0e-07 59.7 112 31.2
Atru.chr3.1003 Acer truncatum HOM05D000002 ORTHO05D000001 2.6e-07 59.3 113 32.7
Atru.chr8.532 Acer truncatum HOM05D000002 ORTHO05D000001 2.6e-07 59.3 131 29.8
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 111 29.7
TAR650G0001 Trochodendron aralioides HOM05D000067 ORTHO05D000001 2.6e-07 59.3 107 28.0
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 5.8e-07 58.2 113 26.5
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 5.8e-07 58.2 110 32.7
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 5.8e-07 58.2 110 32.7
Manes.13G013492 Manihot esculenta HOM05D000002 ORTHO05D000001 5.8e-07 58.2 83 38.6
Nitab4.5_0000027g0330 Nicotiana tabacum HOM05D000002 ORTHO05D000001 5.8e-07 58.2 124 27.4
Sopen01g017880 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-07 57.8 98 32.7
Atru.chr9.1622 Acer truncatum HOM05D000002 ORTHO05D000001 9.8e-07 57.4 113 26.5
Atru.chr9.1623 Acer truncatum HOM05D000002 ORTHO05D000001 9.8e-07 57.4 113 26.5
Hma1.2p1_0682F.1_g202600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.8e-07 57.4 127 26.0
Sopen10g014150 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-07 57.4 109 25.7
TWI75G0432 Tripterygium wilfordii HOM05D017849 ORTHO05D000001 9.8e-07 57.4 151 27.2
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-06 57.0 136 23.5
SHI03004 Sapria himalayana HOM05D000624 ORTHO05D000495 1.3e-06 57.0 64 50.0
TWI63G1325 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.3e-06 57.0 87 39.1
Atru.chr9.1627 Acer truncatum HOM05D000002 ORTHO05D000001 1.7e-06 56.6 93 31.2
Sp4g06215 Schrenkiella parvula HOM05D000002 ORTHO05D000001 1.7e-06 56.6 111 32.4
TPR.G5721 Trifolium pratense HOM05D000002 ORTHO05D000001 1.7e-06 56.6 100 30.0
TWI63G0191 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.7e-06 56.6 119 31.1
Atru.chr3.2937 Acer truncatum HOM05D000002 ORTHO05D000001 2.2e-06 56.2 66 36.4
Ciclev10013678m.g Citrus clementina HOM05D000002 ORTHO05D000001 2.2e-06 56.2 93 34.4
COL.COLO4_24669 Corchorus olitorius HOM05D014020 ORTHO05D000001 2.2e-06 56.2 67 37.3
Peaxi162Scf00237g00226 Petunia axillaris HOM05D000002 ORTHO05D000001 2.2e-06 56.2 121 28.9
Rhsim01G0134800 Rhododendron simsii HOM05D002709 ORTHO05D002914 2.2e-06 56.2 113 33.6
Sopen07g003750 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-06 56.2 142 25.4
Rhsim01G0007500 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.9e-06 55.8 123 30.9
Solyc05g025970.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.9e-06 55.8 71 39.4
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-06 55.8 100 29.0
Sopen12g010660 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-06 55.5 88 34.1
Atru.chr13.248 Acer truncatum HOM05D000002 ORTHO05D000001 4.9e-06 55.1 112 28.6
TWI77G0605 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 4.9e-06 55.1 76 36.8
PSO754G0020 Papaver somniferum HOM05D000002 ORTHO05D000001 6.4e-06 54.7 121 28.1
Sopen02g010030 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-06 54.7 69 42.0
Sopen03g025020 Solanum pennellii HOM05D007487 ORTHO05D008561 6.4e-06 54.7 78 39.7
Sopen06g017500 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-06 54.7 78 34.6
HanXRQChr17g0541481 Helianthus annuus HOM05D000002 ORTHO05D000001 8.3e-06 54.3 114 26.3
PSO478G4367 Papaver somniferum HOM05D000002 ORTHO05D000001 8.3e-06 54.3 113 28.3
VMungo1080G0955 Vigna mungo HOM05D000002 ORTHO05D000001 8.3e-06 54.3 102 31.4


User provided reference genes

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