Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.2e-67 258.8 130 100.0
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.4e-52 208.0 120 87.5
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.4e-50 203.0 120 85.0
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-37 159.1 124 70.2
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.2e-36 156.8 127 70.1
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-32 142.5 97 75.3
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 2.4e-18 95.9 99 51.5
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.2e-18 95.5 75 66.7
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 4.6e-17 91.7 138 42.8
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 2.3e-16 89.4 83 54.2
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 8.7e-16 87.4 107 46.7
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.5e-15 86.7 127 44.1
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 1.5e-15 86.7 98 49.0
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.9e-15 86.3 99 47.5
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 2.5e-15 85.9 93 48.4
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 3.3e-15 85.5 106 43.4
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 4.3e-15 85.1 93 48.4
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 5.6e-15 84.7 106 48.1
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 7.3e-15 84.3 99 48.5
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 7.3e-15 84.3 108 42.6
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 9.6e-15 84.0 108 49.1
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 1.3e-14 83.6 95 48.4
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 1.6e-14 83.2 98 48.0
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 1.6e-14 83.2 100 50.0
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.6e-14 83.2 108 48.1
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.6e-14 83.2 135 42.2
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 2.1e-14 82.8 84 51.2
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 2.1e-14 82.8 100 45.0
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 2.8e-14 82.4 106 43.4
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 2.8e-14 82.4 100 47.0
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 3.6e-14 82.0 95 49.5
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 3.6e-14 82.0 134 40.3
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 6.2e-14 81.3 115 45.2
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 6.2e-14 81.3 101 45.5
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 6.2e-14 81.3 99 46.5
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 6.2e-14 81.3 95 49.5
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 8.1e-14 80.9 127 41.7
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 8.1e-14 80.9 109 45.9
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 8.1e-14 80.9 110 42.7
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.4e-13 80.1 94 47.9
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 1.4e-13 80.1 100 47.0
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.4e-13 80.1 121 39.7
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 1.8e-13 79.7 102 45.1
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 1.8e-13 79.7 94 46.8
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.8e-13 79.7 102 43.1
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.8e-13 79.7 101 47.5
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.8e-13 79.7 91 50.5
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.4e-13 79.3 141 40.4
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.4e-13 79.3 141 40.4
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 2.4e-13 79.3 94 48.9
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 2.4e-13 79.3 113 45.1
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 3.1e-13 79.0 130 40.0
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 3.1e-13 79.0 92 46.7
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 4.0e-13 78.6 95 46.3
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.0e-13 78.6 100 49.0
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 4.0e-13 78.6 129 39.5
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 4.0e-13 78.6 109 44.0
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.3e-13 78.2 141 39.0
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 6.9e-13 77.8 102 44.1
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 6.9e-13 77.8 121 42.1
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.9e-13 77.8 102 47.1
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 6.9e-13 77.8 94 48.9
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 6.9e-13 77.8 104 45.2
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 6.9e-13 77.8 91 49.5
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 9.0e-13 77.4 102 44.1
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 9.0e-13 77.4 85 49.4
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 9.0e-13 77.4 108 44.4
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 1.2e-12 77.0 100 48.0
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 1.5e-12 76.6 118 41.5
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 1.5e-12 76.6 105 46.7
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 1.5e-12 76.6 95 48.4
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.5e-12 76.6 127 43.3
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.0e-12 76.3 128 43.8
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.0e-12 76.3 128 43.8
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 3.4e-12 75.5 111 41.4
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 3.4e-12 75.5 101 43.6
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 3.4e-12 75.5 102 47.1
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 3.4e-12 75.5 110 40.9
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 4.4e-12 75.1 104 44.2
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 5.8e-12 74.7 100 46.0
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 5.8e-12 74.7 128 38.3
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 7.6e-12 74.3 99 43.4
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 7.6e-12 74.3 97 42.3
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 9.9e-12 73.9 97 45.4
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 9.9e-12 73.9 99 43.4
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 9.9e-12 73.9 105 46.7
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 1.3e-11 73.6 102 44.1
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 1.3e-11 73.6 118 40.7
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 1.3e-11 73.6 101 42.6
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 1.3e-11 73.6 100 46.0
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-11 73.2 104 46.2
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 1.7e-11 73.2 76 51.3
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 2.2e-11 72.8 105 39.0
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 2.2e-11 72.8 105 42.9
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 2.9e-11 72.4 97 45.4
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 2.9e-11 72.4 95 46.3
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.9e-11 72.4 121 42.1
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 2.9e-11 72.4 145 40.0
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 3.8e-11 72.0 99 42.4
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 3.8e-11 72.0 97 47.4
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 4.9e-11 71.6 102 42.2
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 4.9e-11 71.6 98 46.9
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 4.9e-11 71.6 137 36.5
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 6.4e-11 71.2 103 45.6
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 6.4e-11 71.2 101 41.6
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 6.4e-11 71.2 101 41.6
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 6.4e-11 71.2 101 41.6
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 6.4e-11 71.2 100 47.0
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 6.4e-11 71.2 100 47.0
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 8.4e-11 70.9 139 36.7
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 8.4e-11 70.9 92 43.5
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 1.1e-10 70.5 101 41.6
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.1e-10 70.5 92 47.8
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 1.4e-10 70.1 99 37.4
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.9e-10 69.7 96 42.7
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 3.2e-10 68.9 101 38.6
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 3.2e-10 68.9 108 41.7
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 3.2e-10 68.9 109 39.4
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 4.2e-10 68.6 99 42.4
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 4.2e-10 68.6 99 42.4
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 5.4e-10 68.2 127 37.8
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 7.1e-10 67.8 99 43.4
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 7.1e-10 67.8 99 43.4
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 7.1e-10 67.8 95 44.2
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 7.1e-10 67.8 101 43.6
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 9.3e-10 67.4 103 40.8
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 1.2e-09 67.0 101 40.6
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.2e-09 67.0 101 40.6
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.2e-09 67.0 133 33.8
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.2e-09 67.0 101 40.6
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 1.6e-09 66.6 108 39.8
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.6e-09 66.6 135 37.0
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.6e-09 66.6 100 44.0
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 1.6e-09 66.6 79 50.6
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 2.1e-09 66.2 98 42.9
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 2.1e-09 66.2 98 42.9
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 3.5e-09 65.5 90 42.2
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 3.5e-09 65.5 97 39.2
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 4.6e-09 65.1 84 46.4
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 7.8e-09 64.3 90 37.8
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 7.8e-09 64.3 93 40.9
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 7.8e-09 64.3 97 38.1
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.0e-08 63.9 107 39.3
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 1.3e-08 63.5 90 37.8
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 1.3e-08 63.5 90 37.8
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 1.3e-08 63.5 112 42.0
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 6.6e-08 61.2 97 38.1
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 6.6e-08 61.2 90 36.7
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 6.6e-08 61.2 90 36.7
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 6.6e-08 61.2 90 36.7
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 2.5e-07 59.3 99 36.4
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 3.3e-07 58.9 103 36.9
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 4.8e-06 55.1 88 36.4
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 4.8e-06 55.1 108 35.2
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 8.1e-06 54.3 74 45.9


User provided reference genes

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