Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00345 Eucalyptus grandis HOM05D007891 ORTHO05D009992 4.4e-122 441.4 242 100.0
Migut.A01060 Erythranthe guttata HOM05D007891 ORTHO05D009992 9.2e-11 71.6 67 62.7
ATR0579G034 Amborella trichopoda HOM05D007891 ORTHO05D009992 1.6e-10 70.9 53 69.8
Manes.01G000186 Manihot esculenta HOM05D007891 ORTHO05D009992 3.5e-10 69.7 58 65.5
COL.COLO4_10847 Corchorus olitorius HOM05D007891 ORTHO05D009992 1.0e-09 68.2 58 65.5
Thecc.03G215400 Theobroma cacao HOM05D007891 ORTHO05D009992 2.3e-09 67.0 55 67.3
Cfa011885 Carpinus fangiana HOM05D007891 ORTHO05D009992 2.9e-09 66.6 59 61.0
QL12p003189 Quercus lobata HOM05D007891 ORTHO05D009992 6.6e-09 65.5 57 59.6
Zm00001eb250770 Zea mays HOM05D007891 ORTHO05D009992 6.6e-09 65.5 63 58.7
TWI15G0344 Tripterygium wilfordii HOM05D007891 ORTHO05D009992 8.6e-09 65.1 49 65.3
SalBow6G2331 Salvia bowleyana HOM05D007891 ORTHO05D009992 1.1e-08 64.7 60 61.7
Zm00001eb072990 Zea mays HOM05D007891 ORTHO05D009992 1.1e-08 64.7 49 65.3
Os07g0469200 Oryza sativa ssp. japonica HOM05D007891 ORTHO05D009992 1.5e-08 64.3 69 63.8
Ciclev10023227m.g Citrus clementina HOM05D007891 ORTHO05D009992 1.9e-08 63.9 65 58.5
MD00G1096700 Malus domestica HOM05D007891 ORTHO05D009992 2.5e-08 63.5 67 56.7
PGR042G1189 Punica granatum HOM05D007891 ORTHO05D009992 2.5e-08 63.5 61 57.4
Ca_00459_v3 Cicer arietinum L. HOM05D007891 ORTHO05D009992 3.3e-08 63.2 47 68.1
RcHm_v2.0_Chr7g0187861 Rosa chinensis HOM05D007891 ORTHO05D009992 3.3e-08 63.2 47 66.0
Duzib205G0121 Durio zibethinus HOM05D007891 ORTHO05D009992 4.3e-08 62.8 55 58.2
Lj6g0010842 Lotus japonicus HOM05D007891 ORTHO05D009992 5.6e-08 62.4 59 57.6
Os04g0581700 Oryza sativa ssp. japonica HOM05D007891 ORTHO05D009992 5.6e-08 62.4 49 61.2
Phvul.006G173900 Phaseolus vulgaris HOM05D007891 ORTHO05D009992 5.6e-08 62.4 58 60.3
arahy.Tifrunner.gnm1.ann1.GMZ6HP Arachis hypogaea HOM05D007891 ORTHO05D009992 7.3e-08 62.0 56 64.3
Gorai.004G128000 Gossypium raimondii HOM05D007891 ORTHO05D009992 7.3e-08 62.0 59 61.0
Prupe.5G135300 Prunus persica HOM05D007891 ORTHO05D009992 9.5e-08 61.6 62 59.7
Gorai.003G073400 Gossypium raimondii HOM05D007891 ORTHO05D009992 1.2e-07 61.2 60 61.7
Potri.011G149400 Populus trichocarpa HOM05D007891 ORTHO05D009992 1.2e-07 61.2 57 57.9
Haze_09219 Corylus avellana HOM05D000010 ORTHO05D000063 1.6e-07 60.8 52 65.4
Gohir.D03G088400 Gossypium hirsutum HOM05D007891 ORTHO05D009992 1.6e-07 60.8 60 61.7
MD06G1124700 Malus domestica HOM05D007891 ORTHO05D009992 1.6e-07 60.8 68 54.4
Gohir.A02G095100 Gossypium hirsutum HOM05D007891 ORTHO05D009992 2.8e-07 60.1 60 60.0
Medtr2g016650 Medicago truncatula HOM05D007891 ORTHO05D009992 2.8e-07 60.1 52 59.6
Nn1g05266 Nelumbo nucifera HOM05D007891 ORTHO05D009992 2.8e-07 60.1 48 64.6
Nn3g18767 Nelumbo nucifera HOM05D007891 ORTHO05D009992 2.8e-07 60.1 55 58.2
Actinidia22232 Actinidia chinensis HOM05D007891 ORTHO05D009992 3.6e-07 59.7 86 50.0
Lalb_Chr20g0117551 Lupinus albus HOM05D007891 ORTHO05D009992 4.7e-07 59.3 56 62.5
PSO063G6751 Papaver somniferum HOM05D007891 ORTHO05D009992 4.7e-07 59.3 59 54.2
TPR.G27295 Trifolium pratense HOM05D007891 ORTHO05D009992 4.7e-07 59.3 57 54.4
Thhalv10009221m.g Eutrema salsugineum HOM05D007891 ORTHO05D009992 6.1e-07 58.9 66 48.5
Gohir.D08G121300 Gossypium hirsutum HOM05D007891 ORTHO05D009992 6.1e-07 58.9 59 57.6
Zm00001eb096350 Zea mays HOM05D007891 ORTHO05D009992 6.1e-07 58.9 52 65.4
Zm00001eb096380 Zea mays HOM05D007891 ORTHO05D009992 6.1e-07 58.9 52 65.4
Zm00001eb096470 Zea mays HOM05D007891 ORTHO05D009992 6.1e-07 58.9 52 65.4
Gohir.A08G108600 Gossypium hirsutum HOM05D007891 ORTHO05D009992 8.0e-07 58.5 61 57.4
Gohir.A09G187300 Gossypium hirsutum HOM05D007891 ORTHO05D009992 8.0e-07 58.5 45 64.4
CSS0018813 Camellia sinensis var. sinensis HOM05D007891 ORTHO05D009992 1.4e-06 57.8 51 58.8
Zm00001eb096410 Zea mays HOM05D007891 ORTHO05D009992 1.4e-06 57.8 52 63.5
Zm00001eb096420 Zea mays HOM05D007891 ORTHO05D009992 1.4e-06 57.8 52 63.5
Gohir.D09G182100 Gossypium hirsutum HOM05D007891 ORTHO05D009992 2.3e-06 57.0 60 56.7
Gorai.006G204200 Gossypium raimondii HOM05D007891 ORTHO05D009992 2.3e-06 57.0 60 56.7
CANSAT21G1412 Cannabis sativa HOM05D007891 ORTHO05D009992 3.0e-06 56.6 51 58.8
A09p33310 Brassica napus HOM05D007891 ORTHO05D009992 6.8e-06 55.5 61 49.2
BraA09t38876Z Brassica rapa HOM05D007891 ORTHO05D009992 6.8e-06 55.5 61 49.2
THA.LOC104806463 Tarenaya hassleriana HOM05D007891 ORTHO05D009992 6.8e-06 55.5 51 58.8
BcaB03g13704 Brassica carinata HOM05D007891 ORTHO05D009992 8.9e-06 55.1 61 47.5
ClCG01G001300 Citrullus lanatus HOM05D007891 ORTHO05D009992 8.9e-06 55.1 49 59.2


User provided reference genes

Program Settings