Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00169 Eucalyptus grandis HOM05D005871 ORTHO05D003654 7.1e-110 401.0 261 100.0
Eucgr.D01448 Eucalyptus grandis HOM05D005871 ORTHO05D003654 2.7e-77 292.7 238 87.8
Thecc.06G238200 Theobroma cacao HOM05D005871 ORTHO05D003654 1.2e-24 117.9 261 42.9
Gorai.010G189400 Gossypium raimondii HOM05D005871 ORTHO05D003654 4.7e-21 105.9 261 35.2
Phvul.006G140600 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 1.4e-20 104.4 260 34.2
VMungo0540G0718 Vigna mungo HOM05D005871 ORTHO05D003654 1.4e-20 104.4 260 36.5
Lalb_Chr18g0057151 Lupinus albus HOM05D005871 ORTHO05D003654 6.8e-20 102.1 260 33.8
QL05p068166 Quercus lobata HOM05D005871 ORTHO05D003654 8.9e-20 101.7 263 34.2
MD00G1057200 Malus domestica HOM05D005871 ORTHO05D003654 5.8e-19 99.0 272 36.8
Gohir.A06G155900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.2e-18 97.1 262 39.3
CiPaw.09G107300 Carya illinoinensis HOM05D005871 ORTHO05D003654 2.9e-18 96.7 261 35.6
Cfa000051 Carpinus fangiana HOM05D005871 ORTHO05D003654 6.4e-18 95.5 262 39.7
Gohir.D06G162300 Gossypium hirsutum HOM05D005871 ORTHO05D003654 4.1e-17 92.8 239 34.3
CANSAT56G4186 Cannabis sativa HOM05D005871 ORTHO05D003654 1.6e-16 90.9 68 64.7
Glyma.09G012800 Glycine max HOM05D005871 ORTHO05D003654 2.1e-16 90.5 261 39.8
TPR.G10004 Trifolium pratense HOM05D005871 ORTHO05D003654 6.0e-16 89.0 263 33.1
Haze_07001 Corylus avellana HOM05D005871 ORTHO05D003654 1.7e-15 87.4 262 38.5
PGR004G2708 Punica granatum HOM05D005871 ORTHO05D003654 1.7e-15 87.4 259 35.5
TWI38G1492 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 2.3e-15 87.0 263 34.2
Medtr2g026565 Medicago truncatula HOM05D005871 ORTHO05D003654 3.9e-15 86.3 262 35.5
Cpa.g.sc1092.4 Carica papaya HOM05D005871 ORTHO05D003654 5.1e-15 85.9 265 37.0
Hma1.2p1_0657F.1_g196840 Hydrangea macrophylla HOM05D005871 ORTHO05D003654 1.5e-14 84.3 263 32.7
Ciclev10016570m.g Citrus clementina HOM05D005871 ORTHO05D003654 9.5e-14 81.6 133 42.9
Lj6g0012820 Lotus japonicus HOM05D005871 ORTHO05D003654 1.2e-13 81.3 78 57.7
Cc09_g00530 Coffea canephora HOM05D005871 ORTHO05D003654 1.6e-13 80.9 253 37.2
Potri.016G007400 Populus trichocarpa HOM05D005871 ORTHO05D003654 1.6e-13 80.9 258 38.4
COL.COLO4_31921 Corchorus olitorius HOM05D005871 ORTHO05D003654 3.6e-13 79.7 258 39.5
Glyma.17G006900 Glycine max HOM05D005871 ORTHO05D003654 3.6e-13 79.7 263 30.0
arahy.Tifrunner.gnm1.ann1.5G685G Arachis hypogaea HOM05D005871 ORTHO05D003654 6.2e-13 79.0 267 31.8
Sabra16G0012200 Salix brachista HOM05D005871 ORTHO05D003654 3.1e-12 76.6 73 56.2
Psat1g173400 Pisum sativum HOM05D005871 ORTHO05D003654 1.5e-11 74.3 263 31.6
Thecc.07G015800 Theobroma cacao HOM05D005871 ORTHO05D003654 2.0e-11 73.9 262 31.7
Actinidia02292 Actinidia chinensis HOM05D005871 ORTHO05D003654 1.3e-10 71.2 254 30.3
Sc05g0009780 Simmondsia chinensis HOM05D005871 ORTHO05D003654 6.4e-10 68.9 258 33.3
Manes.09G078218 Manihot esculenta HOM05D005871 ORTHO05D003654 8.4e-10 68.6 261 31.4
Ah.09g234010 Amaranthus hybridus HOM05D005871 ORTHO05D003654 1.1e-09 68.2 258 29.5
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 3.2e-09 66.6 263 32.7
VMungo0647G1579 Vigna mungo HOM05D005871 ORTHO05D003654 3.2e-09 66.6 262 29.4
Manes.09G078209 Manihot esculenta HOM05D005871 ORTHO05D003654 4.1e-09 66.2 261 31.8
Glyma.08G328600 Glycine max HOM05D005871 ORTHO05D003654 7.1e-09 65.5 271 28.8
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 7.1e-09 65.5 260 28.1
Phvul.006G056300 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 1.2e-08 64.7 270 28.5
Lalb_Chr04g0247911 Lupinus albus HOM05D005871 ORTHO05D003654 2.1e-08 63.9 253 28.1
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 2.1e-08 63.9 265 27.9
Gorai.004G033400 Gossypium raimondii HOM05D005871 ORTHO05D003654 4.6e-08 62.8 260 28.5
TWI38G0819 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 4.6e-08 62.8 260 27.7
Gohir.D08G035400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 6.0e-08 62.4 263 28.9
Manes.03G140300 Manihot esculenta HOM05D005871 ORTHO05D003654 7.8e-08 62.0 258 27.9
Prupe.4G241600 Prunus persica HOM05D005871 ORTHO05D003654 7.8e-08 62.0 272 26.5
DCAR_022606 Daucus carota HOM05D005871 ORTHO05D003654 1.0e-07 61.6 273 28.9
Lj6g0021470 Lotus japonicus HOM05D005871 ORTHO05D003654 1.0e-07 61.6 274 27.0
Phvul.008G278200 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 1.0e-07 61.6 249 28.5
SalBow1G1270 Salvia bowleyana HOM05D005871 ORTHO05D003654 1.3e-07 61.2 255 29.4
Glyma.02G299500 Glycine max HOM05D005871 ORTHO05D003654 3.0e-07 60.1 271 29.2
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 6.6e-07 58.9 258 28.7
Glyma.18G078200 Glycine max HOM05D005871 ORTHO05D003654 6.6e-07 58.9 268 26.5
Manes.03G140301 Manihot esculenta HOM05D005871 ORTHO05D003654 6.6e-07 58.9 257 32.7
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 6.6e-07 58.9 252 29.4
TAR629G2179 Trochodendron aralioides HOM05D005871 ORTHO05D003654 6.6e-07 58.9 98 41.8
Ah.04g166520 Amaranthus hybridus HOM05D005871 ORTHO05D003654 8.6e-07 58.5 267 33.7
Psat0s4683g0040 Pisum sativum HOM05D005871 ORTHO05D003654 8.6e-07 58.5 260 24.6
PGR083G2866 Punica granatum HOM05D005871 ORTHO05D003654 8.6e-07 58.5 261 30.7
Glyma.14G014200 Glycine max HOM05D005871 ORTHO05D003654 1.1e-06 58.2 279 26.2
Prupe.3G198500 Prunus persica HOM05D008806 ORTHO05D003654 1.5e-06 57.8 82 36.6
MELO3C026071.2 Cucumis melo HOM05D005871 ORTHO05D003654 2.5e-06 57.0 67 50.7
TWI39G0465 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 2.5e-06 57.0 259 30.1
CiPaw.11G202600 Carya illinoinensis HOM05D005871 ORTHO05D003654 4.3e-06 56.2 229 34.5
COL.COLO4_09813 Corchorus olitorius HOM05D005871 ORTHO05D003654 5.6e-06 55.8 261 31.8
CsaV3_1G015540 Cucumis sativus L. HOM05D005871 ORTHO05D003654 5.6e-06 55.8 67 49.3
Prupe.4G006100 Prunus persica HOM05D005871 ORTHO05D003654 5.6e-06 55.8 32 90.6
Sabra16G0239800 Salix brachista HOM05D005871 ORTHO05D003654 5.6e-06 55.8 255 27.1
BcaC05g29208 Brassica carinata HOM05D010616 ORTHO05D003654 7.3e-06 55.5 237 31.6
C05p54810 Brassica napus HOM05D010616 ORTHO05D003654 7.3e-06 55.5 237 31.6
BolC5t34153H Brassica oleracea HOM05D010616 ORTHO05D003654 7.3e-06 55.5 237 31.6
Manes.15G061300 Manihot esculenta HOM05D005871 ORTHO05D003654 7.3e-06 55.5 232 29.7


User provided reference genes

Program Settings