Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00141 Eucalyptus grandis HOM05D000480 ORTHO05D000313 3.8e-126 454.9 238 100.0
Eucgr.G01207 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.3e-43 179.9 212 50.9
Eucgr.D02654 Eucalyptus grandis HOM05D000480 ORTHO05D000313 3.1e-43 179.5 185 55.1
Eucgr.L00135 Eucalyptus grandis HOM05D000480 ORTHO05D000313 5.2e-43 178.7 205 52.7
Eucgr.E01798 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.9e-41 172.9 212 50.9
Eucgr.D01337 Eucalyptus grandis HOM05D000480 ORTHO05D000313 7.1e-40 168.3 170 57.1
Eucgr.E01868 Eucalyptus grandis HOM05D000480 ORTHO05D000313 3.5e-39 166.0 212 49.5
Eucgr.E01844 Eucalyptus grandis HOM05D000480 ORTHO05D000313 7.8e-39 164.9 174 55.2
Eucgr.D00949 Eucalyptus grandis HOM05D000480 ORTHO05D000313 5.6e-37 158.7 213 46.9
Eucgr.L00123 Eucalyptus grandis HOM05D000480 ORTHO05D000313 1.7e-33 147.1 194 46.9
Eucgr.L01133 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.9e-33 146.4 175 48.0
Eucgr.D00030 Eucalyptus grandis HOM05D000480 ORTHO05D000313 6.4e-33 145.2 185 49.2
Eucgr.L00105 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.4e-32 143.3 158 53.8
Eucgr.D00941 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.1e-28 130.2 189 43.9
Eucgr.L00132 Eucalyptus grandis HOM05D000480 ORTHO05D000313 8.1e-28 128.3 170 47.6
Eucgr.D00934 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.6e-26 123.2 214 39.7
Eucgr.L00121 Eucalyptus grandis HOM05D000480 ORTHO05D000313 6.4e-25 118.6 171 42.7
Eucgr.L00134 Eucalyptus grandis HOM05D000480 ORTHO05D000313 1.4e-24 117.5 245 38.4
Eucgr.L01132 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.4e-24 116.7 173 42.2
Eucgr.D00928 Eucalyptus grandis HOM05D000480 ORTHO05D000313 1.6e-23 114.0 216 42.1
Eucgr.D00951 Eucalyptus grandis HOM05D000480 ORTHO05D000313 5.8e-18 95.5 198 34.8
Eucgr.D02131 Eucalyptus grandis HOM05D000480 ORTHO05D000313 1.9e-16 90.5 105 53.3
Eucgr.L00102 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.4e-16 90.1 148 40.5
Thecc.03G241400 Theobroma cacao HOM05D000480 ORTHO05D000313 2.3e-14 83.6 179 36.3
Duzib205G0304 Durio zibethinus HOM05D000480 ORTHO05D000313 1.5e-13 80.9 181 35.9
Gorai.008G231200 Gossypium raimondii HOM05D000480 ORTHO05D000313 1.5e-13 80.9 180 33.3
Thecc.03G241000 Theobroma cacao HOM05D000480 ORTHO05D000313 3.3e-13 79.7 183 37.7
Gohir.D12G215600 Gossypium hirsutum HOM05D000480 ORTHO05D000313 4.3e-13 79.3 180 32.8
Manes.01G088000 Manihot esculenta HOM05D000480 ORTHO05D000313 4.8e-12 75.9 139 38.1
Gohir.A12G213100 Gossypium hirsutum HOM05D000480 ORTHO05D000313 6.2e-12 75.5 180 32.8
COL.COLO4_07197 Corchorus olitorius HOM05D000448 ORTHO05D000313 1.8e-11 73.9 136 38.2
Duzib205G1806 Durio zibethinus HOM05D000480 ORTHO05D000313 3.1e-11 73.2 181 34.3
COL.COLO4_07198 Corchorus olitorius HOM05D000480 ORTHO05D000313 3.4e-10 69.7 187 34.2
Atru.chr11.181 Acer truncatum HOM05D000480 ORTHO05D000313 5.8e-10 68.9 182 33.5
Gorai.003G178500 Gossypium raimondii HOM05D000480 ORTHO05D000313 7.6e-10 68.6 183 29.5
Thecc.03G241100 Theobroma cacao HOM05D000480 ORTHO05D000313 4.9e-09 65.9 176 31.8
C07p48560 Brassica napus HOM05D000480 ORTHO05D000313 1.1e-08 64.7 175 32.6
Glyma.06G241600 Glycine max HOM05D000480 ORTHO05D000313 1.9e-08 63.9 147 34.7
Gohir.A03G003850 Gossypium hirsutum HOM05D000480 ORTHO05D000313 3.2e-08 63.2 137 35.0
CiPaw.11G073600 Carya illinoinensis HOM05D000480 ORTHO05D000313 5.5e-08 62.4 147 34.7
BcaC06g33534 Brassica carinata HOM05D000480 ORTHO05D000313 9.3e-08 61.6 189 31.2
CiPaw.11G073500 Carya illinoinensis HOM05D000480 ORTHO05D000313 9.3e-08 61.6 148 35.1
CARHR223630 Cardamine hirsuta HOM05D000480 ORTHO05D000313 2.1e-07 60.5 234 29.5
BcaC06g33522 Brassica carinata HOM05D000480 ORTHO05D000313 2.7e-07 60.1 189 31.7
Glyma.06G242000 Glycine max HOM05D000480 ORTHO05D000313 2.7e-07 60.1 149 32.2
THA.LOC104820697 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 3.5e-07 59.7 164 32.9
Psat4g128400 Pisum sativum HOM05D000480 ORTHO05D000313 6.0e-07 58.9 154 35.1
TAR375G0700 Trochodendron aralioides HOM05D000480 ORTHO05D000313 7.9e-07 58.5 88 45.5
CARHR255620 Cardamine hirsuta HOM05D000480 ORTHO05D000313 1.0e-06 58.2 196 26.5
Glyma.06G241300 Glycine max HOM05D000480 ORTHO05D000313 1.0e-06 58.2 149 34.2
PGR031G3410 Punica granatum HOM05D000480 ORTHO05D000313 1.0e-06 58.2 119 37.0
Eucgr.H05145 Eucalyptus grandis HOM05D000480 ORTHO05D000313 1.3e-06 57.8 123 37.4
PGR031G1030 Punica granatum HOM05D000480 ORTHO05D000313 1.3e-06 57.8 117 32.5
BolC7t45364H Brassica oleracea HOM05D000480 ORTHO05D000313 1.8e-06 57.4 130 35.4
Dinv25129 Davidia involucrata HOM05D000480 ORTHO05D000313 2.3e-06 57.0 227 27.8
Eucgr.L00103 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.3e-06 57.0 85 45.9
TAR374G0960 Trochodendron aralioides HOM05D000480 ORTHO05D000313 2.3e-06 57.0 145 33.8
QL01p009318 Quercus lobata HOM05D000480 ORTHO05D000313 5.1e-06 55.8 149 30.9
A09p60940 Brassica napus HOM05D000480 ORTHO05D000313 6.7e-06 55.5 72 45.8
BraA09t41467Z Brassica rapa HOM05D000480 ORTHO05D000313 6.7e-06 55.5 72 45.8
Dinv25126 Davidia involucrata HOM05D000480 ORTHO05D000313 6.7e-06 55.5 193 27.5
Migut.A00098 Erythranthe guttata HOM05D000448 ORTHO05D000291 6.7e-06 55.5 130 32.3
Eucgr.H05144 Eucalyptus grandis HOM05D000480 ORTHO05D000313 6.7e-06 55.5 65 52.3
SalBow1G5232 Salvia bowleyana HOM05D000448 ORTHO05D000291 6.7e-06 55.5 152 32.9
Thecc.10G055800 Theobroma cacao HOM05D000480 ORTHO05D000313 6.7e-06 55.5 150 35.3
TAR375G1115 Trochodendron aralioides HOM05D000480 ORTHO05D000313 6.7e-06 55.5 88 43.2
Carub.0006s2975 Capsella rubella HOM05D000480 ORTHO05D000313 8.7e-06 55.1 160 31.9
Medtr8g467780 Medicago truncatula HOM05D000480 ORTHO05D000313 8.7e-06 55.1 153 32.7


User provided reference genes

Program Settings