Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00050 Eucalyptus grandis HOM05D003336 ORTHO05D003807 4.0e-81 304.7 149 100.0
Eucgr.H01866 Eucalyptus grandis HOM05D003336 ORTHO05D003807 3.7e-79 298.1 146 98.6
Eucgr.A00092 Eucalyptus grandis HOM05D003336 ORTHO05D003807 8.2e-79 297.0 145 99.3
Eucgr.A00283 Eucalyptus grandis HOM05D003336 ORTHO05D003807 3.1e-78 295.0 145 98.6
CANSAT78G0594 Cannabis sativa HOM05D003336 ORTHO05D003807 2.3e-73 278.9 145 93.1
GSVIVG01006062001 Vitis vinifera HOM05D003336 ORTHO05D003807 1.5e-72 276.2 145 90.3
PGR083G1911 Punica granatum HOM05D003336 ORTHO05D003807 2.0e-72 275.8 145 92.4
Gohir.A02G012500 Gossypium hirsutum HOM05D003336 ORTHO05D003807 2.6e-72 275.4 140 93.6
Sc25g0002520 Simmondsia chinensis HOM05D003336 ORTHO05D003807 3.4e-72 275.0 148 89.9
Duzib151G0181 Durio zibethinus HOM05D003336 ORTHO05D003807 4.4e-72 274.6 145 90.3
Thecc.04G177600 Theobroma cacao HOM05D003336 ORTHO05D003807 7.5e-72 273.9 145 90.3
Gorai.005G016800 Gossypium raimondii HOM05D003336 ORTHO05D003807 9.8e-72 273.5 139 93.5
EL10Ac3g06008 Beta vulgaris HOM05D003336 ORTHO05D003807 1.3e-71 273.1 142 91.5
Ciclev10001634m.g Citrus clementina HOM05D003336 ORTHO05D003807 1.3e-71 273.1 146 88.4
QL07p004835 Quercus lobata HOM05D003336 ORTHO05D003807 1.3e-71 273.1 145 90.3
AUR62008210 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.7e-71 272.7 140 91.4
Gohir.D02G013300 Gossypium hirsutum HOM05D003336 ORTHO05D003807 2.2e-71 272.3 145 89.7
Potri.017G029200 Populus trichocarpa HOM05D003336 ORTHO05D003807 2.8e-71 271.9 145 88.3
Os05g0194600 Oryza sativa ssp. japonica HOM05D003336 ORTHO05D003807 3.7e-71 271.6 138 94.2
Sed0018746 Sechium edule HOM05D003336 ORTHO05D003807 3.7e-71 271.6 140 92.1
AUR62011428 Chenopodium quinoa HOM05D003336 ORTHO05D003807 8.3e-71 270.4 140 91.4
Zm00001eb283430 Zea mays HOM05D003336 ORTHO05D003807 1.4e-70 269.6 138 92.8
Manes.04G043500 Manihot esculenta HOM05D003336 ORTHO05D003807 1.8e-70 269.2 138 93.5
AUR62030962 Chenopodium quinoa HOM05D003336 ORTHO05D003807 3.1e-70 268.5 140 90.7
FvH4_3g16550 Fragaria vesca HOM05D003336 ORTHO05D003807 3.1e-70 268.5 145 88.3
FAN16G2332 Fragaria x ananassa HOM05D003336 ORTHO05D003807 3.1e-70 268.5 145 88.3
FAN25G0065 Fragaria x ananassa HOM05D003336 ORTHO05D003807 3.1e-70 268.5 145 88.3
Hma1.2p1_0886F.1_g232710 Hydrangea macrophylla HOM05D003336 ORTHO05D003807 3.1e-70 268.5 139 92.1
MELO3C021601.2 Cucumis melo HOM05D003336 ORTHO05D003807 4.1e-70 268.1 137 92.7
HPP92_018106 Vanilla planifolia HOM05D003336 ORTHO05D003807 4.1e-70 268.1 144 88.2
CsaV3_5G026930 Cucumis sativus L. HOM05D003336 ORTHO05D003807 5.4e-70 267.7 137 92.7
THA.LOC104806347 Tarenaya hassleriana HOM05D003336 ORTHO05D003807 5.4e-70 267.7 138 92.8
Zm00001eb376450 Zea mays HOM05D003336 ORTHO05D003807 5.4e-70 267.7 138 91.3
Zm00001eb016890 Zea mays HOM05D003336 ORTHO05D003807 7.0e-70 267.3 138 92.0
Zm00001eb121330 Zea mays HOM05D003336 ORTHO05D003807 7.0e-70 267.3 138 92.0
Zm00001eb336440 Zea mays HOM05D003336 ORTHO05D003807 7.0e-70 267.3 138 92.0
MELO3C013276.2 Cucumis melo HOM05D003336 ORTHO05D003807 9.1e-70 266.9 137 92.0
QL10p049056 Quercus lobata HOM05D003336 ORTHO05D003807 1.2e-69 266.5 145 87.6
CiPaw.02G054300 Carya illinoinensis HOM05D003336 ORTHO05D003807 1.6e-69 266.2 140 90.0
ClCG10G008650 Citrullus lanatus HOM05D003336 ORTHO05D003807 2.0e-69 265.8 137 92.0
Zm00001eb007550 Zea mays HOM05D003336 ORTHO05D003807 2.0e-69 265.8 138 91.3
Zm00001eb059340 Zea mays HOM05D003336 ORTHO05D003807 2.0e-69 265.8 138 91.3
Zm00001eb398700 Zea mays HOM05D003336 ORTHO05D003807 2.0e-69 265.8 138 91.3
Aqoxy2G03656 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 2.7e-69 265.4 137 92.7
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 3.5e-69 265.0 145 89.0
RcHm_v2.0_Chr1g0331181 Rosa chinensis HOM05D003336 ORTHO05D003807 3.5e-69 265.0 145 86.9
A01p13940 Brassica napus HOM05D003336 ORTHO05D003807 4.5e-69 264.6 144 86.1
BraA01t01340Z Brassica rapa HOM05D003336 ORTHO05D003807 4.5e-69 264.6 144 86.1
Carub.0007s1861 Capsella rubella HOM05D003336 ORTHO05D003807 4.5e-69 264.6 140 87.9
Cc04_g08950 Coffea canephora HOM05D003336 ORTHO05D003807 4.5e-69 264.6 141 90.1
Zm00001eb324020 Zea mays HOM05D003336 ORTHO05D003807 5.9e-69 264.2 138 91.3
CSS0038565 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 7.7e-69 263.8 140 90.0
CSS0043784 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 7.7e-69 263.8 140 90.0
Atru.chr6.1080 Acer truncatum HOM05D003336 ORTHO05D003807 1.0e-68 263.5 145 86.9
Ah.11g051610 Amaranthus hybridus HOM05D003336 ORTHO05D003807 1.0e-68 263.5 142 88.0
ATR0796G111 Amborella trichopoda HOM05D003336 ORTHO05D003807 1.0e-68 263.5 137 90.5
CARHR229640 Cardamine hirsuta HOM05D003336 ORTHO05D003807 1.0e-68 263.5 144 85.4
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 1.0e-68 263.5 138 91.3
Atru.chr6.1778 Acer truncatum HOM05D003336 ORTHO05D003807 1.3e-68 263.1 138 89.1
Migut.O00911 Erythranthe guttata HOM05D003336 ORTHO05D003807 1.3e-68 263.1 138 90.6
FAN03G2504 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.3e-68 263.1 144 86.8
Glyma.17G108000 Glycine max HOM05D003336 ORTHO05D003807 1.3e-68 263.1 147 87.1
Glyma.19G252200 Glycine max HOM05D003336 ORTHO05D003807 1.3e-68 263.1 147 87.8
Rhsim09G0026500 Rhododendron simsii HOM05D003336 ORTHO05D003807 1.3e-68 263.1 138 91.3
RhsimUnG0196100 Rhododendron simsii HOM05D003336 ORTHO05D003807 1.3e-68 263.1 138 91.3
Lsat_1_v5_gn_3_6100 Lactuca sativa HOM05D003336 ORTHO05D003807 1.7e-68 262.7 139 88.5
AL7G30880 Arabidopsis lyrata HOM05D003336 ORTHO05D003807 2.9e-68 261.9 140 87.9
FAN11G0541 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.9e-68 261.9 142 88.0
FAN21G2317 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.9e-68 261.9 145 86.2
AT4G22720 Arabidopsis thaliana HOM05D003336 ORTHO05D003807 3.8e-68 261.5 138 89.1
ECA246G0584 Erigeron canadensis HOM05D003336 ORTHO05D003807 3.8e-68 261.5 142 87.3
Phvul.006G109300 Phaseolus vulgaris HOM05D003336 ORTHO05D003807 3.8e-68 261.5 147 87.1
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 3.8e-68 261.5 142 88.7
TAR365G0105 Trochodendron aralioides HOM05D003336 ORTHO05D003807 3.8e-68 261.5 145 85.5
BcaC09g51096 Brassica carinata HOM05D003336 ORTHO05D003807 5.0e-68 261.2 144 85.4
BcaNung01042 Brassica carinata HOM05D003336 ORTHO05D003807 5.0e-68 261.2 144 84.7
C01p16980 Brassica napus HOM05D003336 ORTHO05D003807 5.0e-68 261.2 144 85.4
PSO210G2800 Papaver somniferum HOM05D003336 ORTHO05D003807 5.0e-68 261.2 139 87.8
TPR.G37811 Trifolium pratense HOM05D003336 ORTHO05D003807 5.0e-68 261.2 147 87.8
Solyc02g068750.1 Solanum lycopersicum HOM05D003336 ORTHO05D003807 6.5e-68 260.8 138 89.1
TWI34G1872 Tripterygium wilfordii HOM05D003336 ORTHO05D003807 6.5e-68 260.8 138 89.1
Aa31LG6G4680 Aethionema arabicum HOM05D003336 ORTHO05D003807 8.6e-68 260.4 140 87.1
Thhalv10025586m.g Eutrema salsugineum HOM05D003336 ORTHO05D003807 1.1e-67 260.0 139 87.1
Lj1g0015608 Lotus japonicus HOM05D003336 ORTHO05D003807 1.1e-67 260.0 136 91.2
MD17G1219400 Malus domestica HOM05D003336 ORTHO05D003807 1.1e-67 260.0 145 86.9
Sopen02g017920 Solanum pennellii HOM05D003336 ORTHO05D003807 1.9e-67 259.2 138 89.1
PGSC0003DMG400010450 Solanum tuberosum HOM05D003336 ORTHO05D003807 1.9e-67 259.2 138 89.1
VMungo0540G1651 Vigna mungo HOM05D003336 ORTHO05D003807 1.9e-67 259.2 147 85.7
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 2.5e-67 258.8 147 86.4
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 2.5e-67 258.8 147 86.4
FAN10G0305 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.5e-67 258.8 144 86.1
FAN10G0412 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.5e-67 258.8 144 86.1
CSS0016383 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.2e-67 258.5 141 87.9
BolC1t01638H Brassica oleracea HOM05D003336 ORTHO05D003807 4.2e-67 258.1 144 84.7
HanXRQChr17g0533451 Helianthus annuus HOM05D003336 ORTHO05D003807 5.5e-67 257.7 145 85.5
Psat6g173800 Pisum sativum HOM05D003336 ORTHO05D003807 5.5e-67 257.7 144 87.5
Prupe.1G196300 Prunus persica HOM05D003336 ORTHO05D003807 5.5e-67 257.7 149 84.6
Medtr1g090817 Medicago truncatula HOM05D003336 ORTHO05D003807 7.2e-67 257.3 147 85.7
CAN.G149.29 Capsicum annuum HOM05D003336 ORTHO05D003807 1.2e-66 256.5 140 86.4
FAN06G1925 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.1e-66 255.8 142 86.6
arahy.Tifrunner.gnm1.ann1.H7WPER Arachis hypogaea HOM05D003336 ORTHO05D003807 2.8e-66 255.4 147 84.4
Lalb_Chr18g0044261 Lupinus albus HOM05D003336 ORTHO05D003807 2.8e-66 255.4 136 89.7
Oeu061601.1 Olea europaea HOM05D003336 ORTHO05D003807 6.1e-66 254.2 142 87.3
AUR62003310 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.7e-63 246.1 128 91.4
arahy.Tifrunner.gnm1.ann1.UX0YUZ Arachis hypogaea HOM05D003336 ORTHO05D003807 7.0e-62 240.7 135 85.2
SHI23517 Sapria himalayana HOM05D003336 ORTHO05D003807 1.6e-61 239.6 164 73.2
Atru.chr6.1044 Acer truncatum HOM05D003336 ORTHO05D003807 3.5e-61 238.4 145 80.7
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 1.1e-59 233.4 138 79.0
SMO196G0197 Selaginella moellendorffii HOM05D003336 ORTHO05D003807 5.6e-59 231.1 137 81.0
Pp3c8_19600 Physcomitrium patens HOM05D003336 ORTHO05D003807 4.0e-57 224.9 136 76.5
CBR_g36984 Chara braunii HOM05D003336 ORTHO05D003807 1.4e-54 216.5 139 74.1
RcHm_v2.0_Chr1g0329821 Rosa chinensis HOM05D003336 ORTHO05D003807 7.0e-54 214.2 142 74.6
CSS0012442 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.0e-52 210.3 139 74.8
C01p17110 Brassica napus HOM05D003336 ORTHO05D003807 3.9e-52 208.4 130 80.8
PRCOL_00003655 Prasinoderma coloniale HOM05D003336 ORTHO05D003807 1.1e-51 206.8 136 75.0
Zm00001eb191860 Zea mays HOM05D003336 ORTHO05D003807 4.3e-51 204.9 106 91.5
Zm00001eb442100 Zea mays HOM05D003336 ORTHO05D003807 2.1e-50 202.6 138 76.1
SpUn1040_0020 Schrenkiella parvula HOM05D003336 ORTHO05D003807 1.2e-48 196.8 117 80.3
MCO05G700 Micromonas commoda HOM05D003336 ORTHO05D003807 1.5e-48 196.4 136 68.4
C01p17150 Brassica napus HOM05D003336 ORTHO05D003807 1.7e-47 193.0 111 81.1
BolC1t01652H Brassica oleracea HOM05D003336 ORTHO05D003807 1.7e-47 193.0 111 81.1
BcaC09g51089 Brassica carinata HOM05D003336 ORTHO05D003807 2.2e-47 192.6 111 81.1
arahy.Tifrunner.gnm1.ann1.DI9DGG Arachis hypogaea HOM05D003336 ORTHO05D003807 2.4e-46 189.1 113 82.3
SEGI_39923 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 1.2e-45 186.8 97 87.6
Aqoxy7G02152 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 7.8e-45 184.1 112 80.4
C01p17060 Brassica napus HOM05D003336 ORTHO05D003807 1.9e-43 179.5 107 80.4
C01p17090 Brassica napus HOM05D003336 ORTHO05D003807 1.9e-43 179.5 107 80.4
BolC1t01648H Brassica oleracea HOM05D003336 ORTHO05D003807 1.9e-43 179.5 107 80.4
CSS0001398 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 8.9e-41 170.6 98 83.7
C01p17130 Brassica napus HOM05D003336 ORTHO05D003807 1.5e-40 169.9 111 75.7
BolC1t01651H Brassica oleracea HOM05D003336 ORTHO05D003807 1.5e-40 169.9 111 75.7
Ciclev10002827m.g Citrus clementina HOM05D003336 ORTHO05D003807 2.2e-39 166.0 92 85.9
CSS0025461 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.0e-36 157.1 148 58.1
Cfa023393 Carpinus fangiana HOM05D003336 ORTHO05D003807 1.6e-34 149.8 165 50.9
Cpa.g.sc9.295 Carica papaya HOM05D003336 ORTHO05D003807 8.1e-34 147.5 79 91.1
FAN15G0900 Fragaria x ananassa HOM05D003336 ORTHO05D003807 4.0e-33 145.2 79 84.8
BolC1t01646H Brassica oleracea HOM05D003336 ORTHO05D003807 3.4e-32 142.1 88 78.4
CSS0000567 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.1e-30 135.2 91 73.6
CSS0006022 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 7.1e-30 134.4 88 75.0
CSS0042404 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.3e-28 130.2 68 89.7
CSS0043766 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.3e-28 130.2 68 89.7
FAN13G1004 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.8e-26 122.5 64 85.9
A08p15940 Brassica napus HOM05D003336 ORTHO05D003807 1.5e-19 100.1 53 90.6
CSS0023275 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.1e-18 96.3 56 78.6
CSS0040953 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 8.1e-18 94.4 88 59.1
CSS0001716 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.5e-16 90.1 70 65.7
CSS0040178 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.5e-16 90.1 70 65.7
Atru.chr7.305 Acer truncatum HOM05D003336 ORTHO05D003807 2.3e-12 76.3 66 56.1
CSS0049342 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.5e-11 73.6 67 58.2
MBI01_g10302_MAGBIO Magnolia biondii HOM05D003336 ORTHO05D003807 1.9e-11 73.2 62 59.7
Atru.chr7.309 Acer truncatum HOM05D003336 ORTHO05D003807 3.3e-11 72.4 69 52.2
CSS0007615 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.8e-10 68.6 35 88.6
Nn1g09612 Nelumbo nucifera HOM05D003336 ORTHO05D003807 1.1e-09 67.4 35 88.6
DCAR_026317 Daucus carota HOM05D003336 ORTHO05D003807 1.4e-09 67.0 35 88.6
C03p84370 Brassica napus HOM05D000924 ORTHO05D001209 2.0e-08 63.2 41 61.0
A08p15930 Brassica napus HOM05D000924 ORTHO05D001209 2.2e-07 59.7 49 59.2
SEGI_08325 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 2.2e-07 59.7 35 77.1
Psat6g173760 Pisum sativum HOM05D003336 ORTHO05D003807 2.9e-07 59.3 50 62.0
Atru.chr7.310 Acer truncatum HOM05D000001 ORTHO05D009429 6.4e-07 58.2 32 84.4
FAN17G2067 Fragaria x ananassa HOM05D003336 ORTHO05D003807 3.2e-06 55.8 31 83.9


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