Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00048 Eucalyptus grandis HOM05D001333 ORTHO05D001208 1.9e-56 222.2 107 100.0
Eucgr.H01861 Eucalyptus grandis HOM05D001333 ORTHO05D001208 1.7e-49 199.1 98 93.9
QL10p058711 Quercus lobata HOM05D001333 ORTHO05D001208 3.4e-26 121.7 99 59.6
QL10p059101 Quercus lobata HOM05D001333 ORTHO05D001208 1.7e-25 119.4 99 58.6
Eucgr.L00046 Eucalyptus grandis HOM05D001333 ORTHO05D001208 3.2e-24 115.2 100 60.0
CiPaw.02G123600 Carya illinoinensis HOM05D001333 ORTHO05D001208 4.2e-24 114.8 99 57.6
Cfa008489 Carpinus fangiana HOM05D001333 ORTHO05D001208 6.0e-23 110.9 99 54.5
Haze_11168 Corylus avellana HOM05D001333 ORTHO05D001208 1.0e-22 110.2 99 54.5
Ciclev10020409m.g Citrus clementina HOM05D001333 ORTHO05D001208 1.9e-21 105.9 99 51.5
Dinv18303 Davidia involucrata HOM05D001333 ORTHO05D001208 1.9e-21 105.9 100 54.0
GSVIVG01038198001 Vitis vinifera HOM05D001333 ORTHO05D001208 2.1e-20 102.4 97 53.6
MD15G1146800 Malus domestica HOM05D001333 ORTHO05D001208 2.8e-20 102.1 99 51.5
Prupe.7G267800 Prunus persica HOM05D001333 ORTHO05D001208 4.8e-20 101.3 100 52.0
CiPaw.01G199200 Carya illinoinensis HOM05D001333 ORTHO05D001208 6.2e-20 100.9 99 49.5
Sabra17G0009100 Salix brachista HOM05D001333 ORTHO05D001208 1.1e-19 100.1 99 50.5
Dinv33227 Davidia involucrata HOM05D001333 ORTHO05D001208 1.4e-19 99.8 99 51.5
TAR362G0202 Trochodendron aralioides HOM05D001333 ORTHO05D001208 1.4e-19 99.8 97 54.6
Thecc.04G160300 Theobroma cacao HOM05D001333 ORTHO05D001208 2.4e-19 99.0 99 50.5
Potri.017G009700 Populus trichocarpa HOM05D001333 ORTHO05D001208 3.1e-19 98.6 99 49.5
RcHm_v2.0_Chr2g0084941 Rosa chinensis HOM05D001333 ORTHO05D001208 4.0e-19 98.2 99 49.5
FvH4_1g00430 Fragaria vesca HOM05D001333 ORTHO05D001208 4.5e-18 94.7 100 50.0
MD02G1003500 Malus domestica HOM05D001333 ORTHO05D001208 4.5e-18 94.7 99 48.5
Cpa.g.sc601.3 Carica papaya HOM05D001333 ORTHO05D001208 5.8e-18 94.4 100 51.0
Duzib151G0765 Durio zibethinus HOM05D001333 ORTHO05D001208 7.6e-18 94.0 99 48.5
FAN28G1807 Fragaria x ananassa HOM05D001333 ORTHO05D001208 9.9e-18 93.6 100 50.0
Hma1.2p1_0765F.1_g215110 Hydrangea macrophylla HOM05D001333 ORTHO05D001208 9.9e-18 93.6 99 46.5
Manes.05G137682 Manihot esculenta HOM05D001333 ORTHO05D001208 9.9e-18 93.6 98 49.0
FAN23G1775 Fragaria x ananassa HOM05D001333 ORTHO05D001208 1.3e-17 93.2 100 49.0
Potri.007G140400 Populus trichocarpa HOM05D001333 ORTHO05D001208 1.3e-17 93.2 99 47.5
Peaxi162Scf00075g00124 Petunia axillaris HOM05D001333 ORTHO05D001208 1.7e-17 92.8 99 48.5
Gohir.A05G328100 Gossypium hirsutum HOM05D001333 ORTHO05D001208 4.9e-17 91.3 99 49.5
Lj6A270T15 Lonicera japonica HOM05D001333 ORTHO05D001208 6.4e-17 90.9 99 46.5
Gorai.009G352000 Gossypium raimondii HOM05D001333 ORTHO05D001208 8.4e-17 90.5 99 48.5
Oeu022453.1 Olea europaea HOM05D001333 ORTHO05D001208 1.1e-16 90.1 97 48.5
Rhsim02G0086300 Rhododendron simsii HOM05D001333 ORTHO05D001208 1.4e-16 89.7 99 47.5
Rhsim02G0087000 Rhododendron simsii HOM05D001333 ORTHO05D001208 1.4e-16 89.7 99 47.5
vmacro15703 Vaccinium macrocarpon HOM05D001333 ORTHO05D001208 3.2e-16 88.6 99 47.5
CSS0048773 Camellia sinensis var. sinensis HOM05D001333 ORTHO05D001208 4.2e-16 88.2 97 49.5
Nitab4.5_0001621g0030 Nicotiana tabacum HOM05D001333 ORTHO05D001208 4.2e-16 88.2 97 47.4
TWI38G1815 Tripterygium wilfordii HOM05D001333 ORTHO05D001208 4.2e-16 88.2 100 46.0
CSS0016113 Camellia sinensis var. sinensis HOM05D002568 ORTHO05D002814 1.6e-15 86.3 97 48.5
Nn1g09521 Nelumbo nucifera HOM05D001333 ORTHO05D001208 3.5e-15 85.1 97 46.4
Migut.N03051 Erythranthe guttata HOM05D001333 ORTHO05D001208 1.8e-14 82.8 98 44.9
PGR042G3665 Punica granatum HOM05D001333 ORTHO05D001208 1.8e-14 82.8 98 44.9
Nn7g37488 Nelumbo nucifera HOM05D001333 ORTHO05D001208 1.5e-13 79.7 99 45.5
PSO675G1355 Papaver somniferum HOM05D001333 ORTHO05D001208 2.1e-12 75.9 101 44.6
Peaxi162Scf00483g00315 Petunia axillaris HOM05D001333 ORTHO05D001208 2.1e-12 75.9 102 43.1
PGSC0003DMG400005366 Solanum tuberosum HOM05D001333 ORTHO05D001208 2.1e-12 75.9 98 45.9
CAN.G176.9 Capsicum annuum HOM05D001333 ORTHO05D001208 1.1e-11 73.6 100 45.0
MSTRG.22045 Avicennia marina HOM05D001333 ORTHO05D001208 3.1e-11 72.0 96 41.7
Solyc08g014440.4 Solanum lycopersicum HOM05D001333 ORTHO05D001208 4.5e-10 68.2 102 46.1
Cc03_g15070 Coffea canephora HOM05D001333 ORTHO05D001208 5.8e-10 67.8 99 38.4
Sopen08g005430 Solanum pennellii HOM05D001333 ORTHO05D001208 7.6e-10 67.4 102 45.1
DCAR_023778 Daucus carota HOM05D001333 ORTHO05D001208 2.2e-09 65.9 101 39.6
PGSC0003DMG400025221 Solanum tuberosum HOM05D001333 ORTHO05D001208 3.8e-09 65.1 100 44.0
FAN26G3259 Fragaria x ananassa HOM05D001333 ORTHO05D001208 8.4e-09 63.9 74 45.9
MBI07_g39639_MAGBIO Magnolia biondii HOM05D001333 ORTHO05D001208 1.1e-08 63.5 97 38.1
THA.LOC104800926 Tarenaya hassleriana HOM05D001333 ORTHO05D001208 1.1e-08 63.5 106 43.4
Gohir.A02G007300 Gossypium hirsutum HOM05D001333 ORTHO05D001208 1.9e-08 62.8 102 44.1
SalBow6G3194 Salvia bowleyana HOM05D001333 ORTHO05D001208 2.5e-08 62.4 96 37.5
Gohir.D02G007100 Gossypium hirsutum HOM05D001333 ORTHO05D001208 3.2e-08 62.0 102 44.1
Gorai.005G008300 Gossypium raimondii HOM05D001333 ORTHO05D001208 3.2e-08 62.0 102 44.1
SGA_v2.0_scaffold25G11007 Striga asiatica HOM05D002514 ORTHO05D002761 9.3e-08 60.5 98 37.8
Nitab4.5_0000013g0250 Nicotiana tabacum HOM05D001333 ORTHO05D001208 1.2e-07 60.1 97 36.1
EL10Ac3g06125 Beta vulgaris HOM05D001333 ORTHO05D001208 1.6e-07 59.7 98 35.7
AUR62023756 Chenopodium quinoa HOM05D001333 ORTHO05D001208 2.1e-07 59.3 98 38.8
Atru.BG.102.p Acer truncatum HOM05D001333 ORTHO05D001208 2.7e-07 58.9 62 50.0
CARHR005210 Cardamine hirsuta HOM05D001333 ORTHO05D001208 1.0e-06 57.0 83 42.2
AUR62002432 Chenopodium quinoa HOM05D001333 ORTHO05D001208 1.3e-06 56.6 99 38.4
Sp1g04510 Schrenkiella parvula HOM05D001333 ORTHO05D001208 6.7e-06 54.3 99 40.4


User provided reference genes

Program Settings