Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03551 Eucalyptus grandis HOM05D005172 ORTHO05D006324 3.0e-223 778.1 371 100.0
PGR044G0670 Punica granatum HOM05D005172 ORTHO05D006324 1.1e-177 626.7 362 80.1
Duzib133G1494 Durio zibethinus HOM05D005172 ORTHO05D006324 3.6e-168 595.1 356 75.3
TWI36G0897 Tripterygium wilfordii HOM05D005172 ORTHO05D006324 4.8e-168 594.7 356 75.8
Sabra14G0088100 Salix brachista HOM05D005172 ORTHO05D006324 4.0e-167 591.7 356 75.8
CiPaw.07G118900 Carya illinoinensis HOM05D005172 ORTHO05D006324 5.3e-167 591.3 353 77.3
Haze_05066 Corylus avellana HOM05D005172 ORTHO05D006324 2.6e-166 589.0 357 74.8
Dinv30897 Davidia involucrata HOM05D005172 ORTHO05D006324 7.6e-166 587.4 356 74.2
TAR362G0256 Trochodendron aralioides HOM05D005172 ORTHO05D006324 1.3e-165 586.6 356 72.8
Cfa005774 Carpinus fangiana HOM05D005172 ORTHO05D006324 2.2e-165 585.9 350 76.3
Dinv24461 Davidia involucrata HOM05D005172 ORTHO05D006324 2.9e-165 585.5 356 73.3
Gohir.A07G129100 Gossypium hirsutum HOM05D005172 ORTHO05D006324 3.8e-165 585.1 353 74.5
Hma1.2p1_0008F-1.1_g005570 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 6.4e-165 584.3 359 73.5
RcHm_v2.0_Chr6g0249301 Rosa chinensis HOM05D005172 ORTHO05D006324 1.9e-164 582.8 358 74.3
Gohir.D07G133500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 4.2e-164 581.6 358 73.7
Gorai.001G144800 Gossypium raimondii HOM05D005172 ORTHO05D006324 1.2e-163 580.1 358 73.5
GSVIVG01031247001 Vitis vinifera HOM05D005172 ORTHO05D006324 1.6e-163 579.7 352 73.3
Eucgr.H01000 Eucalyptus grandis HOM05D005172 ORTHO05D006324 3.5e-163 578.6 352 73.6
Atru.chr5.994 Acer truncatum HOM05D005172 ORTHO05D006324 4.6e-163 578.2 353 73.7
FAN24G1196 Fragaria x ananassa HOM05D005172 ORTHO05D006324 6.0e-163 577.8 357 73.9
FAN24G2042 Fragaria x ananassa HOM05D005172 ORTHO05D006324 6.0e-163 577.8 357 73.9
Nn4g25569 Nelumbo nucifera HOM05D005172 ORTHO05D006324 7.9e-163 577.4 346 74.9
Manes.01G229300 Manihot esculenta HOM05D005172 ORTHO05D006324 1.8e-162 576.2 357 73.7
Duzib211G0527 Durio zibethinus HOM05D005172 ORTHO05D006324 3.9e-162 575.1 356 72.5
FAN19G1206 Fragaria x ananassa HOM05D005172 ORTHO05D006324 5.1e-162 574.7 353 73.9
Potri.014G118600 Populus trichocarpa HOM05D005172 ORTHO05D006324 5.1e-162 574.7 357 74.8
Thecc.01G315700 Theobroma cacao HOM05D005172 ORTHO05D006324 8.7e-162 573.9 359 73.5
Manes.05G014300 Manihot esculenta HOM05D005172 ORTHO05D006324 5.6e-161 571.2 352 74.1
Prupe.8G000200 Prunus persica HOM05D005172 ORTHO05D006324 5.6e-161 571.2 357 72.5
Phvul.007G213050 Phaseolus vulgaris HOM05D005172 ORTHO05D006324 9.6e-161 570.5 361 71.5
VMungo0720G2990 Vigna mungo HOM05D005172 ORTHO05D006324 9.6e-161 570.5 361 71.2
Lalb_Chr21g0309651 Lupinus albus HOM05D005172 ORTHO05D006324 4.8e-160 568.2 355 71.8
QL12p019456 Quercus lobata HOM05D005172 ORTHO05D006324 6.2e-160 567.8 358 71.8
Ca_10273_v3 Cicer arietinum L. HOM05D005172 ORTHO05D006324 1.1e-159 567.0 361 71.2
Lju926A5G28 Lonicera japonica HOM05D005172 ORTHO05D006324 2.0e-158 562.8 346 71.7
Medtr1g086810 Medicago truncatula HOM05D005172 ORTHO05D006324 7.6e-158 560.8 359 71.3
MD07G1000100 Malus domestica HOM05D005172 ORTHO05D006324 1.7e-157 559.7 357 71.4
Glyma.10G011700 Glycine max HOM05D005172 ORTHO05D006324 2.9e-157 558.9 361 70.4
Glyma.02G011100 Glycine max HOM05D005172 ORTHO05D006324 6.5e-157 557.8 366 69.4
Carub.0005s2909 Capsella rubella HOM05D005172 ORTHO05D006324 1.9e-156 556.2 341 71.6
Lj5g0001265 Lotus japonicus HOM05D005172 ORTHO05D006324 1.9e-156 556.2 362 69.3
AT3G62370 Arabidopsis thaliana HOM05D005172 ORTHO05D006324 2.5e-156 555.8 338 72.8
AL5G45130 Arabidopsis lyrata HOM05D005172 ORTHO05D006324 5.5e-156 554.7 358 70.1
CsaV3_7G030060 Cucumis sativus L. HOM05D005172 ORTHO05D006324 1.6e-155 553.1 355 73.8
Sp5g01030 Schrenkiella parvula HOM05D005172 ORTHO05D006324 1.6e-155 553.1 341 71.6
Thhalv10006054m.g Eutrema salsugineum HOM05D005172 ORTHO05D006324 2.7e-155 552.4 358 68.7
MBI18_g32028_MAGBIO Magnolia biondii HOM05D005172 ORTHO05D006324 7.9e-155 550.8 368 68.8
CARHR172700 Cardamine hirsuta HOM05D005172 ORTHO05D006324 3.0e-154 548.9 362 68.8
Psat6g162640 Pisum sativum HOM05D005172 ORTHO05D006324 3.0e-154 548.9 367 68.9
CANSAT25G1511 Cannabis sativa HOM05D005172 ORTHO05D006324 3.9e-154 548.5 362 71.8
Aqoxy2G02725 Aquilegia oxysepala HOM05D005172 ORTHO05D006324 5.1e-154 548.1 359 70.2
MSTRG.21697 Avicennia marina HOM05D005172 ORTHO05D006324 5.1e-154 548.1 359 69.1
A07p25960 Brassica napus HOM05D005172 ORTHO05D006324 2.5e-153 545.8 358 67.6
Nitab4.5_0011508g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 4.3e-153 545.0 357 66.9
BraA07t30243Z Brassica rapa HOM05D005172 ORTHO05D006324 9.6e-153 543.9 357 67.5
Ah.01g003950 Amaranthus hybridus HOM05D005172 ORTHO05D006324 1.6e-152 543.1 357 70.3
BolC6t37994H Brassica oleracea HOM05D005172 ORTHO05D006324 2.1e-152 542.7 357 67.8
Manes.05G005607 Manihot esculenta HOM05D005172 ORTHO05D006324 3.7e-152 542.0 322 76.7
arahy.Tifrunner.gnm1.ann1.SY690W Arachis hypogaea HOM05D005172 ORTHO05D006324 6.3e-152 541.2 362 68.8
Cc02_g35150 Coffea canephora HOM05D005172 ORTHO05D006324 6.3e-152 541.2 366 66.4
CSS0017820 Camellia sinensis var. sinensis HOM05D005172 ORTHO05D006324 1.1e-151 540.4 361 68.4
BcaC08g45198 Brassica carinata HOM05D005172 ORTHO05D006324 1.4e-151 540.0 357 67.5
C06p28240 Brassica napus HOM05D005172 ORTHO05D006324 1.4e-151 540.0 357 67.5
Manes.05G011070 Manihot esculenta HOM05D005172 ORTHO05D006324 1.8e-151 539.7 319 76.8
FvH4_2g00030 Fragaria vesca HOM05D005172 ORTHO05D006324 2.4e-151 539.3 314 78.3
Manes.08G002402 Manihot esculenta HOM05D005172 ORTHO05D006324 2.4e-151 539.3 322 76.4
Nitab4.5_0001338g0130 Nicotiana tabacum HOM05D005172 ORTHO05D006324 2.4e-151 539.3 361 65.9
Solyc01g100590.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 2.4e-151 539.3 357 67.8
Manes.05G014725 Manihot esculenta HOM05D005172 ORTHO05D006324 6.9e-151 537.7 318 76.7
Peaxi162Scf01061g00133 Petunia axillaris HOM05D005172 ORTHO05D006324 6.9e-151 537.7 355 66.8
BcaB02g07340 Brassica carinata HOM05D005172 ORTHO05D006324 9.0e-151 537.3 357 67.5
Sopen01g044090 Solanum pennellii HOM05D005172 ORTHO05D006324 1.2e-150 537.0 354 67.8
SGA_v2.0_scaffold334G49079 Striga asiatica HOM05D005172 ORTHO05D006324 2.0e-150 536.2 359 67.4
CAN.G1076.20 Capsicum annuum HOM05D005172 ORTHO05D006324 3.4e-150 535.4 363 65.8
Aa31LG10G16300 Aethionema arabicum HOM05D005172 ORTHO05D006324 5.9e-150 534.6 358 66.5
PGSC0003DMG400002764 Solanum tuberosum HOM05D005172 ORTHO05D006324 5.9e-150 534.6 354 67.5
TAR633G1620 Trochodendron aralioides HOM05D005172 ORTHO05D006324 7.6e-150 534.3 309 76.1
Sed0009537 Sechium edule HOM05D005172 ORTHO05D006324 2.2e-149 532.7 353 70.5
Sc17g0000390 Simmondsia chinensis HOM05D005172 ORTHO05D006324 1.1e-148 530.4 341 70.4
PSO761G0644 Papaver somniferum HOM05D005172 ORTHO05D006324 1.9e-148 529.6 353 66.6
DCAR_001909 Daucus carota HOM05D005172 ORTHO05D006324 4.6e-147 525.0 358 66.2
Solyc01g079310.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 7.9e-147 524.2 351 67.2
Sopen01g031090 Solanum pennellii HOM05D005172 ORTHO05D006324 1.3e-146 523.5 351 66.7
CAN.G293.20 Capsicum annuum HOM05D005172 ORTHO05D006324 2.3e-146 522.7 351 67.0
EL10As5g23554 Beta vulgaris HOM05D005172 ORTHO05D006324 3.9e-146 521.9 342 70.2
SalBow3G3203 Salvia bowleyana HOM05D005172 ORTHO05D006324 3.9e-146 521.9 354 66.1
Hund09645 Selenicereus undatus HOM05D005172 ORTHO05D006324 5.1e-146 521.5 360 67.5
PGSC0003DMG400009049 Solanum tuberosum HOM05D005172 ORTHO05D006324 5.1e-146 521.5 351 66.4
AUR62031944 Chenopodium quinoa HOM05D005172 ORTHO05D006324 4.3e-145 518.5 358 67.0
vmacro01567 Vaccinium macrocarpon HOM05D005172 ORTHO05D006324 4.3e-145 518.5 448 55.6
DCAR_018281 Daucus carota HOM05D005172 ORTHO05D006324 1.6e-144 516.5 355 66.2
AUR62022232 Chenopodium quinoa HOM05D005172 ORTHO05D006324 2.8e-144 515.8 358 66.2
Ah.02g112400 Amaranthus hybridus HOM05D005172 ORTHO05D006324 1.2e-142 510.4 396 62.4
Rhsim11G0096600 Rhododendron simsii HOM05D005172 ORTHO05D006324 1.2e-142 510.4 445 54.6
Oeu018081.1 Olea europaea HOM05D005172 ORTHO05D006324 1.7e-141 506.5 358 64.0
ClCG09G005000 Citrullus lanatus HOM05D005172 ORTHO05D006324 3.8e-141 505.4 354 69.2
CDE08G0763 Ceratophyllum demersum HOM05D005172 ORTHO05D006324 1.9e-140 503.1 356 63.5
MELO3C015915.2 Cucumis melo HOM05D005172 ORTHO05D006324 7.2e-140 501.1 373 66.0
ATR0693G418 Amborella trichopoda HOM05D005172 ORTHO05D006324 1.6e-139 500.0 358 64.0
MSTRG.20376 Avicennia marina HOM05D005172 ORTHO05D006324 4.6e-139 498.4 338 66.0
Gohir.D12G127500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 2.2e-136 489.6 356 64.9
Gorai.008G138400 Gossypium raimondii HOM05D005172 ORTHO05D006324 2.2e-136 489.6 356 64.9
Cpa.g.sc18.70 Carica papaya HOM05D005172 ORTHO05D006324 7.7e-134 481.1 356 63.5
HPP92_002597 Vanilla planifolia HOM05D005172 ORTHO05D006324 1.3e-133 480.3 358 61.2
Os03g0309000 Oryza sativa ssp. japonica HOM05D005172 ORTHO05D006324 8.5e-133 477.6 332 65.4
Zm00001eb014830 Zea mays HOM05D005172 ORTHO05D006324 8.5e-133 477.6 356 61.5
Manes.05G006214 Manihot esculenta HOM05D005172 ORTHO05D006324 1.7e-128 463.4 275 76.7
Manes.05G008035 Manihot esculenta HOM05D005172 ORTHO05D006324 3.7e-128 462.2 275 76.4
Manes.05G012891 Manihot esculenta HOM05D005172 ORTHO05D006324 3.1e-127 459.1 275 76.0
Migut.B00958 Erythranthe guttata HOM05D005172 ORTHO05D006324 1.6e-126 456.8 357 58.5
THA.LOC104827661 Tarenaya hassleriana HOM05D005172 ORTHO05D006324 5.2e-122 441.8 267 74.2
Actinidia16862 Actinidia chinensis HOM05D005172 ORTHO05D006324 6.7e-122 441.4 311 63.7
SalBow7G2322 Salvia bowleyana HOM05D006337 ORTHO05D008050 1.5e-121 440.3 339 59.6
arahy.Tifrunner.gnm1.ann1.2XA8QH Arachis hypogaea HOM05D005172 ORTHO05D006324 9.1e-119 431.0 248 75.8
HPP92_012811 Vanilla planifolia HOM05D005172 ORTHO05D006324 2.7e-110 402.9 262 66.4
SEGI_40738 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 2.9e-109 399.4 337 55.8
Hma1.2p1_3280F.1_g334820 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 4.0e-106 389.0 315 60.0
unitig_0.g2227 Utricularia gibba HOM05D005172 ORTHO05D003916 8.3e-104 381.3 333 55.0
FAN20G2313 Fragaria x ananassa HOM05D005172 ORTHO05D006324 4.1e-103 379.0 228 73.7
Nitab4.5_0003540g0100 Nicotiana tabacum HOM05D005172 ORTHO05D006324 7.7e-102 374.8 227 70.5
FAN20G2797 Fragaria x ananassa HOM05D005172 ORTHO05D006324 8.6e-101 371.3 250 68.0
Nitab4.5_0006240g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 4.9e-96 355.5 328 54.9
Ciclev10020948m.g Citrus clementina HOM05D005172 ORTHO05D006324 1.2e-91 340.9 204 74.0
Mapoly0070s0043 Marchantia polymorpha HOM05D005172 ORTHO05D006324 2.3e-90 336.7 344 47.4
Lalb_Chr06g0166961 Lupinus albus HOM05D005172 ORTHO05D006324 3.1e-90 336.3 215 69.8
Oeu000005.1 Olea europaea HOM05D005172 ORTHO05D006324 8.6e-85 318.2 233 62.2
Pp3c15_10420 Physcomitrium patens HOM05D005172 ORTHO05D006324 1.1e-84 317.8 362 45.0
SEGI_37594 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 1.9e-84 317.0 259 57.5
Pp3c9_8970 Physcomitrium patens HOM05D005172 ORTHO05D006324 5.6e-84 315.5 356 46.1
SMO119G0084 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 6.2e-83 312.0 365 44.9
TPR.G38637 Trifolium pratense HOM05D005172 ORTHO05D006324 6.2e-83 312.0 192 74.0
COL.COLO4_23212 Corchorus olitorius HOM05D005172 ORTHO05D006324 5.4e-79 298.9 183 76.5
AagrBONN_evm.TU.Sc2ySwM_228.5181 Anthoceros agrestis HOM05D005172 ORTHO05D006324 2.1e-78 297.0 315 47.6
Ciclev10024074m.g Citrus clementina HOM05D005172 ORTHO05D006324 6.6e-77 292.0 203 67.0
Gohir.A12G123800 Gossypium hirsutum HOM05D005172 ORTHO05D006324 2.0e-73 280.4 205 65.4
Ciclev10023330m.g Citrus clementina HOM05D005172 ORTHO05D006324 8.4e-64 248.4 153 78.4
Peaxi162Scf00691g00617 Petunia axillaris HOM05D005172 ORTHO05D006324 5.6e-60 235.7 238 49.2
Lalb_Chr06g0166951 Lupinus albus HOM05D005172 ORTHO05D006324 8.1e-59 231.9 155 67.1
Oeu008479.1 Olea europaea HOM05D005172 ORTHO05D006324 9.0e-50 201.8 277 41.2
CBR_g51501 Chara braunii HOM05D005172 ORTHO05D006324 1.2e-38 164.9 224 40.2
COL.COLO4_23213 Corchorus olitorius HOM05D005172 ORTHO05D006324 4.5e-33 146.4 96 67.7
TPR.G38640 Trifolium pratense HOM05D005172 ORTHO05D006324 2.5e-31 140.6 104 61.5
Ciclev10023884m.g Citrus clementina HOM05D005172 ORTHO05D006324 6.7e-29 132.5 108 62.0
CAN.G1071.4 Capsicum annuum HOM05D005172 ORTHO05D006324 4.5e-25 119.8 99 53.5
SMO163G0002 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 1.1e-23 115.2 102 51.0
CBR_g51503 Chara braunii HOM05D005172 ORTHO05D006324 7.9e-14 82.4 121 32.2
GSVIVG01037608001 Vitis vinifera HOM05D005172 ORTHO05D439154 5.5e-07 59.7 96 36.5


User provided reference genes

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