Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03540 Eucalyptus grandis HOM05D006641 ORTHO05D007573 2.9e-114 415.2 210 100.0
Atru.chr5.1033 Acer truncatum HOM05D006641 ORTHO05D007573 1.3e-29 134.0 221 41.2
Cfa005814 Carpinus fangiana HOM05D006641 ORTHO05D007573 8.4e-29 131.3 205 43.4
Lj5g0026629 Lotus japonicus HOM05D006641 ORTHO05D007573 6.7e-26 121.7 217 39.2
TAR362G0542 Trochodendron aralioides HOM05D006641 ORTHO05D007573 6.7e-26 121.7 212 40.1
Thecc.01G311800 Theobroma cacao HOM05D006641 ORTHO05D007573 8.7e-26 121.3 220 39.1
CSS0030498 Camellia sinensis var. sinensis HOM05D006641 ORTHO05D007573 2.5e-25 119.8 213 41.3
Duzib138G1609 Durio zibethinus HOM05D006641 ORTHO05D007573 3.3e-25 119.4 217 37.8
vmacro02409 Vaccinium macrocarpon HOM05D006641 ORTHO05D007573 3.3e-25 119.4 217 40.1
CiPaw.07G116300 Carya illinoinensis HOM05D006641 ORTHO05D007573 5.7e-25 118.6 221 42.1
Haze_05028 Corylus avellana HOM05D006641 ORTHO05D007573 5.7e-25 118.6 193 42.5
QL12p020167 Quercus lobata HOM05D006641 ORTHO05D007573 5.7e-25 118.6 203 40.4
Dinv33109 Davidia involucrata HOM05D006641 ORTHO05D007573 1.3e-24 117.5 204 37.7
Medtr1g087230 Medicago truncatula HOM05D006641 ORTHO05D007573 2.2e-24 116.7 215 41.4
Gohir.A07G127900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 3.7e-24 115.9 221 38.9
Aqoxy2G01829 Aquilegia oxysepala HOM05D006641 ORTHO05D007573 4.8e-24 115.5 213 38.0
Duzib211G0496 Durio zibethinus HOM05D006641 ORTHO05D007573 4.8e-24 115.5 224 37.9
Glyma.03G218800 Glycine max HOM05D006641 ORTHO05D007573 4.8e-24 115.5 204 40.7
Medtr7g109410 Medicago truncatula HOM05D006641 ORTHO05D007573 4.8e-24 115.5 200 40.5
Lj1g0024392 Lotus japonicus HOM05D006641 ORTHO05D007573 6.3e-24 115.2 199 39.2
Gorai.004G144000 Gossypium raimondii HOM05D006641 ORTHO05D007573 1.1e-23 114.4 220 39.1
Rhsim13G0005400 Rhododendron simsii HOM05D006641 ORTHO05D007573 1.1e-23 114.4 216 38.4
Ciclev10021856m.g Citrus clementina HOM05D006641 ORTHO05D007573 1.4e-23 114.0 218 39.0
COL.COLO4_23247 Corchorus olitorius HOM05D006641 ORTHO05D007573 1.4e-23 114.0 219 37.0
Glyma.19G215600 Glycine max HOM05D006641 ORTHO05D007573 1.4e-23 114.0 206 39.8
Gohir.D07G132300 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.4e-23 114.0 221 38.0
Gorai.001G143700 Gossypium raimondii HOM05D006641 ORTHO05D007573 1.4e-23 114.0 221 38.0
MBI19_g24818_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 1.4e-23 114.0 196 39.3
Cpa.g.sc18.26 Carica papaya HOM05D006641 ORTHO05D007573 2.4e-23 113.2 209 38.8
TWI36G0114 Tripterygium wilfordii HOM05D006641 ORTHO05D007573 3.1e-23 112.8 219 37.4
FAN13G0974 Fragaria x ananassa HOM05D001136 ORTHO05D007573 5.3e-23 112.1 211 42.7
Nn3g21666 Nelumbo nucifera HOM05D006641 ORTHO05D007573 5.3e-23 112.1 214 36.4
Potri.002G196900 Populus trichocarpa HOM05D006641 ORTHO05D007573 5.3e-23 112.1 217 37.8
Gohir.D08G139900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 6.9e-23 111.7 220 39.1
Lalb_Chr02g0146781 Lupinus albus HOM05D006641 ORTHO05D007573 1.2e-22 110.9 195 39.5
Lalb_Chr15g0078301 Lupinus albus HOM05D006641 ORTHO05D007573 1.2e-22 110.9 215 35.3
Psat6g162160 Pisum sativum HOM05D006641 ORTHO05D007573 1.2e-22 110.9 214 39.3
Ca_10290_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.5e-22 110.5 214 40.7
Ca_30054_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.5e-22 110.5 214 40.7
Gohir.A08G119133 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.5e-22 110.5 223 39.0
Hma1.2p1_0212F.1_g090010 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 1.5e-22 110.5 218 37.2
Sabra02G0160400 Salix brachista HOM05D006641 ORTHO05D007573 1.5e-22 110.5 214 37.9
PSO761G0656 Papaver somniferum HOM05D006641 ORTHO05D007573 2.0e-22 110.2 216 37.0
TPR.G19761 Trifolium pratense HOM05D006641 ORTHO05D007573 2.0e-22 110.2 222 39.2
CANSAT25G1473 Cannabis sativa HOM05D006641 ORTHO05D007573 2.6e-22 109.8 225 36.0
ClCG09G005170 Citrullus lanatus HOM05D006641 ORTHO05D007573 3.4e-22 109.4 216 38.9
FvH4_5g39350 Fragaria vesca HOM05D006641 ORTHO05D007573 3.4e-22 109.4 208 40.9
Sed0015554 Sechium edule HOM05D006641 ORTHO05D007573 3.4e-22 109.4 213 36.6
Duzib133G1491 Durio zibethinus HOM05D006641 ORTHO05D007573 4.5e-22 109.0 220 36.8
Glyma.10G013800 Glycine max HOM05D006641 ORTHO05D007573 4.5e-22 109.0 216 35.2
Manes.01G226800 Manihot esculenta HOM05D006641 ORTHO05D007573 4.5e-22 109.0 186 40.9
arahy.Tifrunner.gnm1.ann1.DB9XMS Arachis hypogaea HOM05D006641 ORTHO05D007573 1.0e-21 107.8 215 36.7
FAN08G0230 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.3e-21 107.5 211 41.2
FAN08G2922 Fragaria x ananassa HOM05D006641 ORTHO05D007573 1.3e-21 107.5 211 41.2
FAN18G1732 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.3e-21 107.5 211 41.2
Phvul.007G214900 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 1.3e-21 107.5 207 37.7
VMungo0007G0001 Vigna mungo HOM05D006641 ORTHO05D007573 1.7e-21 107.1 210 38.6
PSO210G6531 Papaver somniferum HOM05D006641 ORTHO05D007573 2.2e-21 106.7 218 36.7
Sabra14G0090500 Salix brachista HOM05D006641 ORTHO05D007573 2.2e-21 106.7 217 37.3
FAN04G2480 Fragaria x ananassa HOM05D001136 ORTHO05D007573 2.9e-21 106.3 211 40.8
Hma1.2p1_0486F.1_g163110 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 2.9e-21 106.3 202 37.1
Hma1.2p1_0486F.1_g163121 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 2.9e-21 106.3 202 37.1
Psat3g020560 Pisum sativum HOM05D006641 ORTHO05D007573 2.9e-21 106.3 213 38.0
PGR119G1902 Punica granatum HOM05D006641 ORTHO05D007573 3.8e-21 105.9 228 36.4
VMungo1383G0778 Vigna mungo HOM05D006641 ORTHO05D007573 5.0e-21 105.5 186 41.4
Prupe.8G270900 Prunus persica HOM05D006641 ORTHO05D007573 8.5e-21 104.8 218 36.7
MD03G1296400 Malus domestica HOM05D006641 ORTHO05D007573 1.1e-20 104.4 220 38.2
Manes.05G002600 Manihot esculenta HOM05D006641 ORTHO05D007573 1.1e-20 104.4 214 37.4
Phvul.001G212200 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 1.1e-20 104.4 199 36.7
Eucgr.H01054 Eucalyptus grandis HOM05D006641 ORTHO05D007573 1.4e-20 104.0 212 37.3
MD11G1315800 Malus domestica HOM05D006641 ORTHO05D007573 1.4e-20 104.0 220 38.2
Oeu008464.1 Olea europaea HOM05D006641 ORTHO05D007573 1.9e-20 103.6 217 35.9
ECA247G2557 Erigeron canadensis HOM05D006641 ORTHO05D007573 2.5e-20 103.2 185 37.8
RcHm_v2.0_Chr7g0241631 Rosa chinensis HOM05D006641 ORTHO05D007573 3.2e-20 102.8 211 39.8
MELO3C015931.2 Cucumis melo HOM05D006641 ORTHO05D007573 4.2e-20 102.4 217 35.9
CsaV3_7G029900 Cucumis sativus L. HOM05D006641 ORTHO05D007573 4.2e-20 102.4 215 35.8
Migut.D00088 Erythranthe guttata HOM05D006641 ORTHO05D007573 4.2e-20 102.4 214 36.4
DCAR_002902 Daucus carota HOM05D006641 ORTHO05D007573 5.5e-20 102.1 205 35.6
AUR62024668 Chenopodium quinoa HOM05D006641 ORTHO05D007573 1.2e-19 100.9 211 35.5
MBI18_g28444_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 1.6e-19 100.5 198 36.9
EL10As5g23515 Beta vulgaris HOM05D006641 ORTHO05D007573 2.1e-19 100.1 211 37.0
Glyma.02G013200 Glycine max HOM05D006641 ORTHO05D007573 2.7e-19 99.8 193 36.3
DCAR_005769 Daucus carota HOM05D006641 ORTHO05D007573 3.6e-19 99.4 204 34.3
Potri.014G122100 Populus trichocarpa HOM05D006641 ORTHO05D007573 3.6e-19 99.4 217 36.4
Actinidia27614 Actinidia chinensis HOM05D006641 ORTHO05D007573 6.1e-19 98.6 205 37.6
AUR62011824 Chenopodium quinoa HOM05D006641 ORTHO05D007573 1.4e-18 97.4 211 36.0
Sopen01g031320 Solanum pennellii HOM05D006641 ORTHO05D007573 1.4e-18 97.4 207 35.3
Peaxi162Scf00691g00003 Petunia axillaris HOM05D006641 ORTHO05D007573 1.8e-18 97.1 208 33.7
Solyc01g079550.2 Solanum lycopersicum HOM05D006641 ORTHO05D007573 1.8e-18 97.1 207 35.3
SGA_v2.0_scaffold376G50279 Striga asiatica HOM05D006641 ORTHO05D007573 1.8e-18 97.1 196 37.2
Nitab4.5_0008979g0010 Nicotiana tabacum HOM05D006641 ORTHO05D007573 2.3e-18 96.7 217 32.7
Ah.11g049320 Amaranthus hybridus HOM05D000446 ORTHO05D000321 3.9e-18 95.9 187 36.4
PGSC0003DMG400009037 Solanum tuberosum HOM05D006641 ORTHO05D007573 3.9e-18 95.9 208 35.6
Nitab4.5_0001301g0080 Nicotiana tabacum HOM05D006641 ORTHO05D007573 1.1e-17 94.4 228 32.5
SalBow3G3599 Salvia bowleyana HOM05D006641 ORTHO05D007573 2.5e-17 93.2 194 36.6
Gohir.D12G129400 Gossypium hirsutum HOM05D006641 ORTHO05D007573 4.3e-17 92.4 205 37.1
HanXRQChr15g0465011 Helianthus annuus HOM05D006641 ORTHO05D007573 7.4e-17 91.7 196 35.2
Lsat_1_v5_gn_9_2880 Lactuca sativa HOM05D006641 ORTHO05D007573 7.4e-17 91.7 206 35.4
Gorai.008G140500 Gossypium raimondii HOM05D006641 ORTHO05D007573 1.3e-16 90.9 205 36.6
ATR0706G193 Amborella trichopoda HOM05D006641 ORTHO05D007573 1.7e-16 90.5 213 35.7
Gohir.A12G125900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.1e-15 87.8 220 34.5
PSO170G1046 Papaver somniferum HOM05D006641 ORTHO05D007573 2.4e-15 86.7 214 33.6
PSO357G0224 Papaver somniferum HOM05D006641 ORTHO05D007573 6.9e-15 85.1 217 33.2
Cc01_g21330 Coffea canephora HOM05D006641 ORTHO05D007573 2.0e-14 83.6 233 31.8
arahy.Tifrunner.gnm1.ann1.Q9I7GX Arachis hypogaea HOM05D006641 ORTHO05D007573 3.4e-14 82.8 113 46.0
TAR589G0002 Trochodendron aralioides HOM05D006641 ORTHO05D007573 3.4e-14 82.8 176 34.1
TAR633G2793 Trochodendron aralioides HOM05D006641 ORTHO05D007573 3.4e-14 82.8 176 34.1
CARHR249590 Cardamine hirsuta HOM05D006641 ORTHO05D007573 5.9e-14 82.0 201 32.3
Sp6g01980 Schrenkiella parvula HOM05D006641 ORTHO05D007573 3.8e-13 79.3 202 31.2
Carub.0006s3513 Capsella rubella HOM05D006641 ORTHO05D007573 6.5e-13 78.6 227 31.3
AT4G02090 Arabidopsis thaliana HOM05D006641 ORTHO05D007573 1.1e-12 77.8 219 32.4
AL6G51140 Arabidopsis lyrata HOM05D006641 ORTHO05D007573 1.9e-12 77.0 225 31.1
BcaB01g02078 Brassica carinata HOM05D006641 ORTHO05D007573 1.9e-12 77.0 196 30.6
Aa31LG5G1730 Aethionema arabicum HOM05D006641 ORTHO05D007573 4.2e-12 75.9 215 31.2
THA.LOC104801302 Tarenaya hassleriana HOM05D006641 ORTHO05D007573 1.2e-11 74.3 212 31.1
BcaC04g24036 Brassica carinata HOM05D001136 ORTHO05D007573 1.6e-11 73.9 202 30.7
A09p01550 Brassica napus HOM05D006641 ORTHO05D007573 1.6e-11 73.9 202 30.7
BolC9t53098H Brassica oleracea HOM05D001136 ORTHO05D007573 1.6e-11 73.9 202 30.7
C09p01650 Brassica napus HOM05D001136 ORTHO05D007573 6.1e-11 72.0 202 30.2
BraA09t35814Z Brassica rapa HOM05D001136 ORTHO05D007573 2.3e-10 70.1 205 30.2
HPP92_018375 Vanilla planifolia HOM05D006641 ORTHO05D007573 1.5e-09 67.4 200 28.5
CiPaw.08G090800 Carya illinoinensis HOM05D006641 ORTHO05D007573 2.0e-09 67.0 216 29.2
Zm00001eb396340 Zea mays HOM05D006641 ORTHO05D007573 2.8e-08 63.2 221 27.1
Thhalv10029320m.g Eutrema salsugineum HOM05D006641 ORTHO05D007573 3.7e-08 62.8 210 29.5
SGA_v2.0_scaffold14G06923 Striga asiatica HOM05D001935 ORTHO05D001700 8.2e-08 61.6 194 33.5
SEGI_32719 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 2.4e-07 60.1 202 29.2
unitig_24.g30589 Utricularia gibba HOM05D001935 ORTHO05D001700 4.1e-07 59.3 117 37.6
unitig_22.g5581 Utricularia gibba HOM05D001935 ORTHO05D001700 5.3e-07 58.9 117 37.6
ATR0326G051 Amborella trichopoda HOM05D001935 ORTHO05D001700 7.0e-07 58.5 170 32.4
SEGI_39105 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 1.2e-06 57.8 201 26.9
TPR.G4797 Trifolium pratense HOM05D006641 ORTHO05D007573 1.2e-06 57.8 145 33.1
Zm00001eb014520 Zea mays HOM05D006641 ORTHO05D007573 5.9e-06 55.5 203 27.1
SEGI_14616 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 7.7e-06 55.1 195 29.7


User provided reference genes

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