Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03537 Eucalyptus grandis HOM05D004995 ORTHO05D006034 1.2e-236 822.8 412 100.0
Cfa005817 Carpinus fangiana HOM05D004995 ORTHO05D006034 4.5e-119 432.2 248 79.0
Glyma.02G013500 Glycine max HOM05D004995 ORTHO05D006034 8.9e-115 417.9 254 72.4
COL.COLO4_23251 Corchorus olitorius HOM05D004995 ORTHO05D006034 2.0e-114 416.8 264 72.3
Ca_10292_v3 Cicer arietinum L. HOM05D004995 ORTHO05D006034 2.6e-114 416.4 256 72.7
Ca_30263_v3 Cicer arietinum L. HOM05D004995 ORTHO05D006034 2.6e-114 416.4 256 72.7
CiPaw.07G116000 Carya illinoinensis HOM05D004995 ORTHO05D006034 3.4e-114 416.0 256 74.6
FvH4_5g39450 Fragaria vesca HOM05D004995 ORTHO05D006034 4.9e-113 412.1 253 73.9
Medtr1g087290 Medicago truncatula HOM05D004995 ORTHO05D006034 4.9e-113 412.1 254 73.2
GSVIVG01028102001 Vitis vinifera HOM05D004995 ORTHO05D006034 8.3e-113 411.4 254 74.8
Lj5g0006877 Lotus japonicus HOM05D004995 ORTHO05D006034 1.1e-112 411.0 255 72.9
Lalb_Chr02g0146751 Lupinus albus HOM05D004995 ORTHO05D006034 1.4e-112 410.6 256 73.8
Prupe.8G270500 Prunus persica HOM05D004995 ORTHO05D006034 1.4e-112 410.6 249 75.5
CSS0035665 Camellia sinensis var. sinensis HOM05D004995 ORTHO05D006034 1.8e-112 410.2 258 72.1
FAN04G1561 Fragaria x ananassa HOM05D004995 ORTHO05D006034 2.4e-112 409.8 253 73.1
FAN18G1671 Fragaria x ananassa HOM05D004995 ORTHO05D006034 2.4e-112 409.8 253 73.5
Glyma.10G014100 Glycine max HOM05D004995 ORTHO05D006034 3.2e-112 409.5 255 72.2
RcHm_v2.0_Chr7g0241761 Rosa chinensis HOM05D004995 ORTHO05D006034 3.2e-112 409.5 257 72.8
Dinv10081 Davidia involucrata HOM05D004995 ORTHO05D006034 4.1e-112 409.1 256 73.0
CSS0012776 Camellia sinensis var. sinensis HOM05D004995 ORTHO05D006034 1.6e-111 407.1 258 71.7
Duzib138G1673 Durio zibethinus HOM05D004995 ORTHO05D006034 2.0e-111 406.8 259 71.0
Atru.chr5.1036 Acer truncatum HOM05D004995 ORTHO05D006034 5.9e-111 405.2 257 73.9
Actinidia25841 Actinidia chinensis HOM05D004995 ORTHO05D006034 7.8e-111 404.8 257 72.0
Ciclev10024590m.g Citrus clementina HOM05D004995 ORTHO05D006034 1.0e-110 404.4 229 79.5
FAN13G2181 Fragaria x ananassa HOM05D004995 ORTHO05D006034 1.0e-110 404.4 253 73.5
Gohir.A12G126200 Gossypium hirsutum HOM05D004995 ORTHO05D006034 1.0e-110 404.4 258 71.3
CANSAT25G2589 Cannabis sativa HOM05D004995 ORTHO05D006034 1.7e-110 403.7 251 73.3
QL12p020317 Quercus lobata HOM05D004995 ORTHO05D006034 3.0e-110 402.9 253 72.7
MBI18_g28452_MAGBIO Magnolia biondii HOM05D004995 ORTHO05D006034 5.0e-110 402.1 254 71.7
vmacro15117 Vaccinium macrocarpon HOM05D004995 ORTHO05D006034 5.0e-110 402.1 250 72.8
Thecc.01G311300 Theobroma cacao HOM05D004995 ORTHO05D006034 6.6e-110 401.7 259 71.0
EL10As5g23507 Beta vulgaris HOM05D004995 ORTHO05D006034 8.6e-110 401.4 251 71.7
Gohir.D12G129700 Gossypium hirsutum HOM05D004995 ORTHO05D006034 1.5e-109 400.6 250 72.4
Gorai.008G140900 Gossypium raimondii HOM05D004995 ORTHO05D006034 1.9e-109 400.2 250 72.4
AUR62024673 Chenopodium quinoa HOM05D004995 ORTHO05D006034 3.3e-109 399.4 234 75.6
Manes.01G226600 Manihot esculenta HOM05D004995 ORTHO05D006034 1.2e-108 397.5 248 72.6
TWI75G0138 Tripterygium wilfordii HOM05D004995 ORTHO05D006034 1.2e-108 397.5 256 70.3
Potri.014G122400 Populus trichocarpa HOM05D004995 ORTHO05D006034 4.7e-108 395.6 245 73.5
Sabra14G0090800 Salix brachista HOM05D004995 ORTHO05D006034 4.7e-108 395.6 245 72.7
Phvul.007G215300 Phaseolus vulgaris HOM05D004995 ORTHO05D006034 6.2e-108 395.2 252 70.2
AUR62011830 Chenopodium quinoa HOM05D004995 ORTHO05D006034 8.0e-108 394.8 232 75.0
Nn3g21651 Nelumbo nucifera HOM05D004995 ORTHO05D006034 8.0e-108 394.8 247 71.3
MD03G1296700 Malus domestica HOM05D004995 ORTHO05D006034 1.4e-107 394.0 257 71.2
Haze_05021 Corylus avellana HOM05D004995 ORTHO05D006034 2.3e-107 393.3 239 76.2
Ah.11g049350 Amaranthus hybridus HOM05D004995 ORTHO05D006034 3.1e-107 392.9 234 73.5
Cpa.g.sc18.23 Carica papaya HOM05D004995 ORTHO05D006034 1.2e-106 391.0 257 69.6
TPR.G19766 Trifolium pratense HOM05D004995 ORTHO05D006034 1.2e-106 391.0 252 69.4
VMungo0720G1458 Vigna mungo HOM05D004995 ORTHO05D006034 1.5e-106 390.6 252 68.3
HanXRQChr06g0167831 Helianthus annuus HOM05D004995 ORTHO05D006034 4.4e-106 389.0 251 70.5
Hund09619 Selenicereus undatus HOM05D004995 ORTHO05D006034 4.4e-106 389.0 246 71.1
Rhsim01G0290000 Rhododendron simsii HOM05D004995 ORTHO05D006034 1.7e-105 387.1 255 70.6
Cc02_g27310 Coffea canephora HOM05D004995 ORTHO05D006034 3.7e-105 386.0 245 71.8
ECA236G3500 Erigeron canadensis HOM05D004995 ORTHO05D006034 3.7e-105 386.0 251 68.9
Potri.002G197400 Populus trichocarpa HOM05D004995 ORTHO05D006034 3.7e-105 386.0 248 72.2
arahy.Tifrunner.gnm1.ann1.KJ11SU Arachis hypogaea HOM05D004995 ORTHO05D006034 1.4e-104 384.0 251 68.9
PGR044G2031 Punica granatum HOM05D004995 ORTHO05D006034 1.9e-104 383.6 253 70.4
Haze_05025 Corylus avellana HOM05D004995 ORTHO05D006034 2.4e-104 383.3 232 76.3
MD11G1316200 Malus domestica HOM05D004995 ORTHO05D006034 2.4e-104 383.3 254 69.7
Psat6g162360 Pisum sativum HOM05D004995 ORTHO05D006034 2.4e-104 383.3 263 68.4
MELO3C015934.2 Cucumis melo HOM05D004995 ORTHO05D006034 7.0e-104 381.7 253 69.6
Sed0026389 Sechium edule HOM05D004995 ORTHO05D006034 1.2e-103 380.9 253 69.6
CsaV3_7G029870 Cucumis sativus L. HOM05D004995 ORTHO05D006034 2.0e-103 380.2 253 69.6
Lsat_1_v5_gn_8_165441 Lactuca sativa HOM05D004995 ORTHO05D006034 1.0e-102 377.9 253 66.4
Sabra02G0160100 Salix brachista HOM05D004995 ORTHO05D006034 1.0e-102 377.9 248 73.0
Aqoxy5G04290 Aquilegia oxysepala HOM05D004995 ORTHO05D006034 5.0e-102 375.6 256 68.4
Sc24g0003210 Simmondsia chinensis HOM05D004995 ORTHO05D006034 8.6e-102 374.8 247 70.0
Oeu047387.1 Olea europaea HOM05D004995 ORTHO05D006034 1.1e-101 374.4 244 70.1
SGA_v2.0_scaffold376G50269 Striga asiatica HOM05D004995 ORTHO05D006034 2.5e-101 373.2 257 66.1
Migut.D00092 Erythranthe guttata HOM05D004995 ORTHO05D006034 9.5e-101 371.3 255 66.7
HanXRQChr15g0464181 Helianthus annuus HOM05D004995 ORTHO05D006034 2.8e-100 369.8 251 64.9
THA.LOC104825943 Tarenaya hassleriana HOM05D004995 ORTHO05D006034 2.8e-100 369.8 248 66.9
Solyc06g009680.4 Solanum lycopersicum HOM05D004995 ORTHO05D006034 4.7e-100 369.0 248 66.9
Sopen06g004320 Solanum pennellii HOM05D004995 ORTHO05D006034 3.1e-99 366.3 245 67.3
DCAR_012367 Daucus carota HOM05D004995 ORTHO05D006034 2.0e-98 363.6 261 62.8
PSO357G0286 Papaver somniferum HOM05D004995 ORTHO05D006034 2.0e-98 363.6 256 62.9
Peaxi162Scf00058g03010 Petunia axillaris HOM05D004995 ORTHO05D006034 2.0e-98 363.6 254 65.7
Nitab4.5_0000363g0330 Nicotiana tabacum HOM05D004995 ORTHO05D006034 3.4e-98 362.8 254 66.1
PSO170G6821 Papaver somniferum HOM05D004995 ORTHO05D006034 5.8e-98 362.1 256 62.1
Actinidia21007 Actinidia chinensis HOM05D004995 ORTHO05D006034 9.8e-98 361.3 213 75.1
Nitab4.5_0006144g0040 Nicotiana tabacum HOM05D004995 ORTHO05D006034 1.1e-96 357.8 254 65.0
CAN.G1280.22 Capsicum annuum HOM05D004995 ORTHO05D006034 4.1e-96 355.9 255 64.7
Aa31LG5G1780 Aethionema arabicum HOM05D004995 ORTHO05D006034 7.8e-95 351.7 257 59.9
Lj1A19G23 Lonicera japonica HOM05D004995 ORTHO05D006034 5.1e-94 349.0 255 61.6
unitig_90.g27435 Utricularia gibba HOM05D004995 ORTHO05D006034 9.5e-93 344.7 232 66.8
Dinv33107 Davidia involucrata HOM05D004995 ORTHO05D006034 4.7e-92 342.4 211 73.9
SHI20082 Sapria himalayana HOM05D004995 ORTHO05D006034 8.1e-92 341.7 246 64.6
CDE09G0507 Ceratophyllum demersum HOM05D004995 ORTHO05D006034 6.8e-91 338.6 244 61.5
HanXRQChr05g0136031 Helianthus annuus HOM05D004995 ORTHO05D006034 8.9e-91 338.2 231 64.9
ATR0706G147 Amborella trichopoda HOM05D004995 ORTHO05D006034 4.4e-90 335.9 230 65.7
DCAR_005771 Daucus carota HOM05D004995 ORTHO05D006034 1.3e-89 334.3 264 59.1
Os03g0304400 Oryza sativa ssp. japonica HOM05D004995 ORTHO05D006034 1.7e-86 323.9 245 59.2
Zm00001eb014460 Zea mays HOM05D004995 ORTHO05D006034 4.0e-83 312.8 255 55.3
SEGI_38340 Sequoiadendron giganteum HOM05D004995 ORTHO05D006034 5.8e-82 308.9 249 57.0
Oeu008461.1 Olea europaea HOM05D004995 ORTHO05D006034 4.8e-76 289.3 165 77.0
HPP92_002052 Vanilla planifolia HOM05D004995 ORTHO05D006034 1.2e-71 274.6 183 68.9
AT4G02110 Arabidopsis thaliana HOM05D004995 ORTHO05D006034 6.6e-70 268.9 166 68.7
CARHR250290 Cardamine hirsuta HOM05D004995 ORTHO05D006034 6.6e-70 268.9 165 69.1
AL6G51110 Arabidopsis lyrata HOM05D004995 ORTHO05D006034 4.3e-69 266.2 166 68.1
Sp6g02000 Schrenkiella parvula HOM05D004995 ORTHO05D006034 1.3e-68 264.6 163 68.1
Carub.0006s3511 Capsella rubella HOM05D004995 ORTHO05D006034 4.8e-68 262.7 161 68.3
Thhalv10028365m.g Eutrema salsugineum HOM05D004995 ORTHO05D006034 8.1e-68 261.9 165 67.3
BolC3t16092H Brassica oleracea HOM05D004995 ORTHO05D006034 1.4e-67 261.2 163 67.5
Peaxi162Scf00001g10213 Petunia axillaris HOM05D004995 ORTHO05D006034 1.8e-67 260.8 178 66.9
A03p31220 Brassica napus HOM05D004995 ORTHO05D006034 2.4e-67 260.4 163 66.9
BraA03t12302Z Brassica rapa HOM05D004995 ORTHO05D006034 2.4e-67 260.4 163 66.9
BcaC01g06775 Brassica carinata HOM05D004995 ORTHO05D006034 3.1e-67 260.0 163 67.5
BcaB01g02426 Brassica carinata HOM05D004995 ORTHO05D006034 9.0e-67 258.5 163 66.9
PGSC0003DMG400009006 Solanum tuberosum HOM05D004995 ORTHO05D006034 1.2e-66 258.1 177 65.5
C03p38070 Brassica napus HOM05D004995 ORTHO05D006034 1.5e-66 257.7 158 68.4
Nitab4.5_0001301g0150 Nicotiana tabacum HOM05D004995 ORTHO05D006034 1.4e-64 251.1 165 67.3
Nitab4.5_0013957g0010 Nicotiana tabacum HOM05D004995 ORTHO05D006034 3.2e-64 250.0 176 63.6
CAN.G362.42 Capsicum annuum HOM05D004995 ORTHO05D006034 5.5e-64 249.2 179 63.1
Mapoly0010s0152 Marchantia polymorpha HOM05D004995 ORTHO05D006034 7.9e-63 245.4 244 47.1
AagrBONN_evm.TU.Sc2ySwM_368.2357 Anthoceros agrestis HOM05D004995 ORTHO05D006034 9.0e-59 231.9 269 43.5
FAN08G3258 Fragaria x ananassa HOM05D004995 ORTHO05D006034 3.8e-57 226.5 127 78.7
TAR633G1331 Trochodendron aralioides HOM05D004995 ORTHO05D006034 2.3e-54 217.2 146 68.5
CBR_g29774 Chara braunii HOM05D004995 ORTHO05D006034 1.9e-53 214.2 243 40.3
SMO367G0571 Selaginella moellendorffii HOM05D004995 ORTHO05D006034 3.7e-52 209.9 249 43.4
TAR633G0044 Trochodendron aralioides HOM05D004995 ORTHO05D006034 5.1e-38 162.9 90 80.0
Aa31LG5G1760 Aethionema arabicum HOM05D004995 ORTHO05D006034 1.2e-31 141.7 135 48.1
arahy.Tifrunner.gnm1.ann1.SI6M6S Arachis hypogaea HOM05D004995 ORTHO05D006034 2.5e-24 117.5 66 72.7
Zm00001eb331400 Zea mays HOM05D004995 ORTHO05D006034 3.7e-20 103.6 66 66.7
Zm00001eb333180 Zea mays HOM05D004995 ORTHO05D006034 1.7e-17 94.7 63 65.1
Zm00001eb309400 Zea mays HOM05D004995 ORTHO05D006034 6.5e-17 92.8 63 63.5
CBR_g16825 Chara braunii HOM05D018838 ORTHO05D006034 1.3e-12 78.6 108 38.0
Dinv38948 Davidia involucrata HOM05D000329 ORTHO05D000833 1.8e-06 58.2 147 29.3
AagrBONN_evm.TU.Sc2ySwM_344.934 Anthoceros agrestis HOM05D000104 ORTHO05D003467 2.3e-06 57.8 56 42.9
SHI20084 Sapria himalayana HOM05D004995 ORTHO05D006034 2.3e-06 57.8 27 96.3
AagrBONN_evm.TU.Sc2ySwM_340.1039 Anthoceros agrestis HOM05D000465 ORTHO05D000301 3.0e-06 57.4 54 48.1
AagrBONN_evm.TU.Sc2ySwM_368.1853 Anthoceros agrestis HOM05D000465 ORTHO05D000301 3.0e-06 57.4 56 42.9
Cre08.g377200 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D003467 3.0e-06 57.4 62 43.5
AagrBONN_evm.TU.Sc2ySwM_228.3868 Anthoceros agrestis HOM05D000465 ORTHO05D000301 5.2e-06 56.6 54 46.3
RcHm_v2.0_Chr3g0497341 Rosa chinensis HOM05D004995 ORTHO05D006034 5.2e-06 56.6 34 76.5


User provided reference genes

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