Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.2e-103 379.8 188 100.0
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.1e-63 244.6 170 75.9
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.4e-44 181.4 136 69.1
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-43 179.9 142 68.3
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.2e-43 179.1 149 64.4
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 1.1e-38 164.1 190 54.2
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.9e-38 161.0 124 70.2
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 1.9e-35 153.3 195 47.2
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.4e-35 152.9 189 48.7
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 9.2e-35 151.0 197 47.2
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 3.5e-34 149.1 198 47.0
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 6.0e-34 148.3 200 47.0
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 1.3e-33 147.1 201 46.3
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.3e-33 147.1 188 47.3
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.0e-33 146.0 188 46.8
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 3.0e-33 146.0 174 47.1
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 6.6e-33 144.8 185 47.0
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 8.6e-33 144.4 196 43.9
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.3e-32 142.1 190 46.3
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.6e-32 141.7 191 47.6
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 7.3e-32 141.4 182 48.4
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 7.3e-32 141.4 190 42.1
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 7.3e-32 141.4 194 45.4
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 9.5e-32 141.0 197 45.2
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 1.2e-31 140.6 192 45.8
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 1.6e-31 140.2 200 46.0
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.6e-31 140.2 198 46.0
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 2.8e-31 139.4 206 44.7
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 2.8e-31 139.4 207 45.9
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 3.6e-31 139.0 192 46.4
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 8.1e-31 137.9 192 45.8
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 1.8e-30 136.7 183 45.9
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 2.4e-30 136.3 204 44.6
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 2.4e-30 136.3 197 44.2
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 4.0e-30 135.6 205 44.9
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.0e-30 135.6 188 47.9
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 5.2e-30 135.2 182 45.1
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 6.8e-30 134.8 187 44.4
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.2e-29 134.0 182 43.4
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 2.0e-29 133.3 194 43.8
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 2.6e-29 132.9 195 41.0
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 3.4e-29 132.5 189 44.4
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 3.4e-29 132.5 185 44.3
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 4.4e-29 132.1 194 41.8
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 5.8e-29 131.7 178 46.6
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 5.8e-29 131.7 192 43.2
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.8e-29 131.7 187 43.9
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 7.6e-29 131.3 186 42.5
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 7.6e-29 131.3 186 43.0
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 9.9e-29 131.0 183 45.9
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 1.3e-28 130.6 193 44.0
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.3e-28 130.6 194 41.8
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.2e-28 129.8 185 44.9
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 3.8e-28 129.0 179 45.3
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 3.8e-28 129.0 179 45.3
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 4.9e-28 128.6 174 43.1
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.4e-28 128.3 187 44.9
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 6.4e-28 128.3 201 42.8
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 6.4e-28 128.3 187 44.4
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 8.4e-28 127.9 178 47.2
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 8.4e-28 127.9 196 40.3
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.1e-27 127.5 174 44.8
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.1e-27 127.5 201 42.8
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 1.4e-27 127.1 201 38.8
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 1.9e-27 126.7 174 43.1
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.4e-27 126.3 201 41.3
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 2.4e-27 126.3 198 41.9
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 3.2e-27 125.9 175 42.9
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 3.2e-27 125.9 177 44.6
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 4.1e-27 125.6 193 40.4
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 4.1e-27 125.6 183 46.4
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 9.2e-27 124.4 176 44.3
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.2e-26 124.0 173 43.4
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 1.2e-26 124.0 178 43.8
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.6e-26 123.6 174 43.1
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 2.1e-26 123.2 184 42.9
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.1e-26 123.2 101 62.4
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 2.7e-26 122.9 190 42.6
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 3.5e-26 122.5 175 44.0
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 3.5e-26 122.5 190 42.1
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 3.5e-26 122.5 185 41.1
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 4.6e-26 122.1 194 40.2
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 1.0e-25 120.9 174 42.5
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.3e-25 120.6 187 43.3
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.3e-25 120.6 185 40.0
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 1.7e-25 120.2 173 45.7
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.7e-25 120.2 198 42.4
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 1.7e-25 120.2 173 45.7
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.7e-25 120.2 186 40.9
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 3.9e-25 119.0 173 43.4
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 3.9e-25 119.0 190 40.5
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 3.9e-25 119.0 189 41.3
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 5.1e-25 118.6 180 41.1
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 5.1e-25 118.6 197 40.6
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 6.6e-25 118.2 201 37.8
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 6.6e-25 118.2 201 37.8
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 6.6e-25 118.2 201 37.8
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 6.6e-25 118.2 201 37.8
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 8.6e-25 117.9 178 45.5
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.1e-24 117.5 184 44.0
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 1.1e-24 117.5 175 41.1
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 1.5e-24 117.1 183 41.5
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.5e-24 117.1 187 41.2
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 2.5e-24 116.3 176 40.9
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 3.3e-24 115.9 201 37.3
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 3.3e-24 115.9 174 44.8
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 4.3e-24 115.5 201 37.3
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 5.6e-24 115.2 177 42.9
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 5.6e-24 115.2 177 42.9
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 7.3e-24 114.8 187 38.5
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 9.6e-24 114.4 182 40.7
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 9.6e-24 114.4 172 41.3
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 1.6e-23 113.6 175 42.9
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 1.6e-23 113.6 175 42.9
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.6e-23 113.6 171 43.9
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 2.1e-23 113.2 172 40.1
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 2.1e-23 113.2 172 40.1
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.1e-23 113.2 180 41.7
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 2.1e-23 113.2 177 37.9
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 2.8e-23 112.8 187 41.2
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 2.8e-23 112.8 200 37.0
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 3.6e-23 112.5 175 41.1
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 4.7e-23 112.1 177 42.4
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 4.7e-23 112.1 172 41.9
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 4.7e-23 112.1 217 36.9
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 6.2e-23 111.7 209 40.7
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 1.1e-22 110.9 170 39.4
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.8e-22 110.2 180 39.4
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 2.4e-22 109.8 184 40.2
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 4.0e-22 109.0 174 42.5
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 5.2e-22 108.6 177 41.2
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 9.0e-22 107.8 176 39.2
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 9.0e-22 107.8 180 38.3
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 2.0e-21 106.7 185 37.3
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 1.3e-20 104.0 170 41.8
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-20 103.6 151 45.0
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 2.2e-20 103.2 178 40.4
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 2.9e-20 102.8 179 35.8
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 2.9e-20 102.8 179 35.8
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 2.9e-20 102.8 179 35.8
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 4.9e-20 102.1 179 35.8
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 8.4e-20 101.3 183 35.5
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 8.4e-20 101.3 168 41.1
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.9e-19 100.1 175 38.9
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 2.4e-19 99.8 182 35.7
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 7.1e-19 98.2 175 40.6
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 2.1e-18 96.7 172 36.0
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 2.7e-18 96.3 215 33.5
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 5.1e-17 92.0 146 38.4
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 6.6e-17 91.7 184 35.9
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 8.7e-17 91.3 210 35.2
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 3.3e-16 89.4 163 39.9
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 4.3e-16 89.0 191 35.6
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 9.6e-16 87.8 170 35.3
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 6.2e-15 85.1 170 35.9
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 2.4e-14 83.2 226 31.4
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 4.0e-14 82.4 143 32.9
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.0e-14 82.4 152 38.2
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 2.2e-12 76.6 168 33.3
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 8.4e-12 74.7 229 27.9
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 4.2e-11 72.4 123 43.1
CsaV3_4G001110 Cucumis sativus L. HOM05D003790 ORTHO05D044967 9.3e-11 71.2 118 39.0
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 2.7e-10 69.7 190 30.5
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 2.7e-10 69.7 168 33.9
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 2.7e-10 69.7 219 30.6
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 3.5e-10 69.3 169 32.0
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 6.0e-10 68.6 115 37.4
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 1.3e-09 67.4 168 33.9
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 1.8e-09 67.0 116 37.9
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 6.7e-09 65.1 116 37.1
MBI07_g42010_MAGBIO Magnolia biondii HOM05D001131 ORTHO05D000972 5.6e-08 62.0 226 29.2
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 5.6e-08 62.0 198 27.3
SEGI_15713 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 1.6e-07 60.5 211 27.5
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 2.1e-07 60.1 166 31.3
Os01g0861400 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 2.8e-07 59.7 110 36.4
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 4.8e-07 58.9 68 52.9
SEGI_15239 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 3.1e-06 56.2 201 28.4
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 5.3e-06 55.5 182 29.7
VMungo0464G2064 Vigna mungo HOM05D001131 ORTHO05D000972 5.3e-06 55.5 202 28.2
GSVIVG01032948001 Vitis vinifera HOM05D001131 ORTHO05D000972 6.9e-06 55.1 208 28.8
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 9.0e-06 54.7 113 38.1


User provided reference genes

Program Settings