Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 7.3e-215 750.4 399 100.0
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 2.0e-159 566.2 376 72.1
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 1.5e-156 556.6 374 70.3
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 2.0e-156 556.2 377 74.5
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 2.2e-155 552.7 399 70.2
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 4.2e-154 548.5 376 72.6
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 1.4e-152 543.5 400 71.8
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 1.5e-151 540.0 399 69.7
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 2.0e-151 539.7 372 73.4
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 3.3e-151 538.9 372 71.8
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 5.7e-151 538.1 378 67.7
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 7.4e-151 537.7 379 70.4
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 7.4e-151 537.7 397 66.0
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 7.0e-149 531.2 374 69.0
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.0e-148 529.6 380 67.6
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.5e-148 528.9 374 67.9
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 5.9e-148 528.1 376 66.8
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 7.7e-148 527.7 374 68.4
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 3.8e-147 525.4 377 67.4
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 3.8e-147 525.4 380 66.6
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 8.5e-147 524.2 378 65.6
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 8.5e-147 524.2 381 66.4
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 1.5e-146 523.5 377 71.4
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 1.5e-146 523.5 376 66.5
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.9e-146 523.1 372 73.1
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 3.2e-146 522.3 410 65.4
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 4.2e-146 521.9 380 65.8
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.6e-145 520.0 384 65.4
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 6.1e-145 518.1 431 61.3
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 3.0e-144 515.8 380 65.8
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 6.7e-144 514.6 383 66.6
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 2.6e-143 512.7 380 65.5
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 2.6e-143 512.7 380 65.0
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 2.6e-143 512.7 376 66.2
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 2.6e-143 512.7 376 66.2
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 2.6e-143 512.7 381 65.4
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 5.7e-143 511.5 376 68.1
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 7.4e-143 511.1 372 66.4
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 1.3e-142 510.4 399 63.2
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 4.8e-142 508.4 403 68.7
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 6.3e-142 508.1 379 64.6
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 1.4e-141 506.9 379 66.2
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 1.8e-141 506.5 383 64.2
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 2.4e-141 506.1 372 69.1
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 4.1e-141 505.4 378 65.6
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 5.3e-141 505.0 383 65.3
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 2.0e-140 503.1 380 63.9
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 2.6e-140 502.7 400 62.2
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 3.5e-140 502.3 378 64.3
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 3.5e-140 502.3 369 70.5
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 5.0e-139 498.4 402 65.2
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 5.0e-139 498.4 383 64.2
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 1.1e-138 497.3 372 69.6
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 1.9e-138 496.5 375 63.7
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 5.5e-138 495.0 405 65.9
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.6e-137 493.4 381 68.2
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.6e-137 493.4 377 69.5
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 1.6e-137 493.4 402 61.7
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 2.1e-137 493.0 382 64.4
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 3.6e-137 492.3 372 64.8
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 1.4e-136 490.3 386 66.6
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 3.0e-136 489.2 375 64.5
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 8.8e-136 487.6 379 63.6
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 1.2e-135 487.3 342 68.1
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 1.5e-135 486.9 375 64.0
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 5.7e-135 485.0 374 65.8
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 7.5e-135 484.6 376 67.8
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 7.5e-135 484.6 377 67.9
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 1.3e-134 483.8 375 64.0
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 1.4e-133 480.3 379 63.3
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 1.8e-133 479.9 377 68.7
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 2.4e-133 479.6 402 62.7
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 5.4e-133 478.4 380 63.7
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 1.6e-132 476.9 396 60.9
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 3.5e-132 475.7 372 64.0
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 4.5e-132 475.3 379 62.3
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 4.5e-132 475.3 369 68.0
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.7e-131 473.4 382 61.0
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 1.7e-131 473.4 330 68.8
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 2.9e-131 472.6 385 61.3
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 3.8e-131 472.2 436 56.4
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 1.0e-128 464.2 405 60.5
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 2.0e-127 459.9 380 62.9
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 2.6e-127 459.5 375 64.3
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 2.6e-127 459.5 374 63.9
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 7.5e-127 458.0 428 58.2
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 1.3e-126 457.2 374 64.2
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 1.3e-126 457.2 376 64.4
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 4.9e-126 455.3 376 59.3
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 8.3e-126 454.5 372 61.3
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 1.1e-125 454.1 373 59.5
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 9.1e-125 451.1 377 58.4
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 1.0e-123 447.6 329 65.3
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 2.3e-123 446.4 377 57.6
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 2.3e-123 446.4 380 59.7
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 1.4e-120 437.2 406 58.6
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 3.4e-119 432.6 344 61.9
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 1.4e-117 427.2 373 57.6
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 1.2e-116 424.1 341 65.7
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 1.1e-114 417.5 394 55.6
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 5.8e-111 405.2 380 54.7
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 6.4e-110 401.7 380 54.5
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 5.4e-109 398.7 375 55.2
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 3.9e-107 392.5 378 54.8
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 1.8e-104 383.6 252 76.2
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 3.4e-103 379.4 382 50.3
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.9e-101 373.6 302 61.3
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 4.6e-100 369.0 270 70.0
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 8.9e-88 328.2 378 52.6
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.1e-85 321.2 377 50.1
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 4.3e-82 309.3 223 66.8
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 1.5e-79 300.8 349 49.3
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 4.9e-78 295.8 279 54.8
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 3.2e-77 293.1 378 42.1
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 2.5e-74 283.5 201 67.7
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.4e-72 277.7 239 60.7
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.3e-62 244.6 299 43.8
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.5e-61 240.4 309 44.0
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 1.0e-54 218.4 172 59.9
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 3.5e-52 209.9 193 65.8
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 7.9e-52 208.8 153 64.7
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 5.1e-51 206.1 161 62.1
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 1.9e-50 204.1 234 43.2
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 6.5e-46 189.1 352 33.5
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 3.8e-38 163.3 126 63.5
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 1.9e-37 161.0 117 65.8
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 2.0e-31 141.0 388 30.4
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 3.8e-30 136.7 362 30.4
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 2.2e-17 94.4 165 35.2
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.4e-16 91.7 66 65.2
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 5.4e-16 89.7 177 35.6
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 3.0e-11 73.9 171 31.0
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 8.8e-11 72.4 69 46.4
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 6.3e-09 66.2 78 51.3


User provided reference genes

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