Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 7.5e-281 969.9 509 100.0
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 1.2e-55 221.9 515 35.0
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 1.5e-55 221.5 497 35.2
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 2.6e-55 220.7 493 36.1
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 2.6e-55 220.7 521 35.5
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 5.9e-52 209.5 562 32.9
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 1.5e-50 204.9 520 34.6
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 2.5e-50 204.1 515 34.6
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 1.0e-48 198.7 341 39.6
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 3.0e-48 197.2 367 39.5
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 3.0e-48 197.2 529 32.9
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 5.2e-48 196.4 532 31.4
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 8.8e-48 195.7 531 33.0
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 1.2e-47 195.3 578 32.2
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 2.8e-46 190.7 520 33.7
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 6.3e-46 189.5 502 31.9
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 5.9e-44 183.0 241 46.9
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 7.7e-44 182.6 532 30.5
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 1.0e-43 182.2 509 30.8
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 1.0e-43 182.2 549 30.2
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 5.0e-43 179.9 511 30.9
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 5.5e-42 176.4 511 30.7
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 9.5e-42 175.6 444 32.0
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 3.6e-41 173.7 446 32.5
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 3.6e-41 173.7 509 28.5
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.0e-40 172.2 355 35.2
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 1.8e-40 171.4 513 30.6
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 6.8e-40 169.5 341 37.5
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 2.0e-39 167.9 500 30.2
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 2.0e-39 167.9 514 32.1
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 3.4e-39 167.2 372 32.8
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 4.4e-39 166.8 327 38.2
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 1.3e-38 165.2 481 31.6
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 3.7e-38 163.7 283 39.6
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 5.4e-37 159.8 519 31.0
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 1.2e-36 158.7 345 35.4
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 1.2e-36 158.7 525 30.5
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 1.6e-36 158.3 418 31.6
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.6e-36 158.3 364 35.7
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 2.7e-36 157.5 471 32.5
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 1.0e-35 155.6 345 35.1
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 3.9e-35 153.7 510 30.8
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 5.0e-35 153.3 515 32.0
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 5.6e-34 149.8 342 33.9
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 5.6e-34 149.8 514 28.8
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 5.6e-34 149.8 513 27.5
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 9.5e-34 149.1 513 29.2
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 2.1e-33 147.9 514 28.4
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 1.0e-32 145.6 191 46.6
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 8.9e-32 142.5 525 29.9
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 3.4e-31 140.6 521 30.3
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 4.4e-31 140.2 433 28.4
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 4.9e-30 136.7 493 28.2
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 1.4e-29 135.2 524 30.5
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 3.2e-29 134.0 542 28.2
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 7.0e-29 132.9 528 28.4
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 1.6e-28 131.7 516 28.1
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 1.0e-27 129.0 321 33.3
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 1.9e-26 124.8 362 32.9
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 2.5e-26 124.4 356 30.6
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 4.3e-26 123.6 212 43.4
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 9.5e-26 122.5 509 26.7
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 9.5e-26 122.5 285 30.5
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 2.1e-25 121.3 364 29.1
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 2.1e-25 121.3 458 28.2
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 6.2e-25 119.8 206 35.4
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.1e-24 119.0 244 34.4
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 4.0e-24 117.1 461 28.4
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 4.0e-24 117.1 287 32.1
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 5.2e-24 116.7 186 39.2
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 5.2e-24 116.7 532 27.3
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 6.8e-24 116.3 486 26.1
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 8.9e-24 115.9 359 28.7
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 5.8e-23 113.2 362 29.8
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 3.7e-22 110.5 463 27.6
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 2.4e-21 107.8 268 31.7
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 4.1e-21 107.1 367 30.0
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 7.8e-20 102.8 164 40.9
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 2.3e-19 101.3 161 39.1
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 2.3e-19 101.3 384 27.9
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 3.0e-19 100.9 412 27.2
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 1.5e-18 98.6 327 30.6
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 2.5e-18 97.8 483 26.9
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 3.3e-18 97.4 482 26.6
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 3.3e-18 97.4 409 26.9
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 4.3e-18 97.1 131 42.0
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 9.5e-18 95.9 256 33.2
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 9.5e-18 95.9 93 43.0
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 1.8e-16 91.7 319 30.4
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 2.3e-16 91.3 251 34.3
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.4e-13 82.0 174 35.1
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 5.4e-13 80.1 415 25.8
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 1.0e-11 75.9 165 33.9
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 1.5e-10 72.0 180 33.9
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 1.2e-09 68.9 94 39.4
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 1.8e-08 65.1 204 29.4
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 1.2e-07 62.4 262 24.8
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 1.2e-07 62.4 107 35.5
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 2.0e-07 61.6 351 25.9
Mapoly0046s0035 Marchantia polymorpha HOM05D007164 ORTHO05D008802 1.7e-06 58.5 157 25.5


User provided reference genes

Program Settings