Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 1.9e-122 442.6 227 100.0
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 4.2e-82 308.5 233 70.8
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 3.1e-77 292.4 242 66.9
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 2.2e-75 286.2 225 69.8
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 2.9e-75 285.8 231 66.7
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 3.8e-75 285.4 226 68.6
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 3.8e-75 285.4 228 68.0
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 8.4e-75 284.3 228 69.7
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.5e-74 282.7 228 67.5
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 4.2e-74 282.0 194 75.3
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 7.1e-74 281.2 199 73.9
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 7.1e-74 281.2 226 67.3
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 9.3e-74 280.8 226 67.3
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 1.6e-73 280.0 232 66.4
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 4.6e-73 278.5 225 67.1
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 4.6e-73 278.5 196 73.5
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 7.9e-73 277.7 189 73.5
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 1.8e-72 276.6 189 73.0
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 3.0e-72 275.8 184 77.2
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 3.0e-72 275.8 197 74.1
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 3.9e-72 275.4 190 73.2
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 3.9e-72 275.4 194 73.7
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 5.1e-72 275.0 223 67.3
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 6.7e-72 274.6 231 64.5
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 8.7e-72 274.2 231 64.5
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 1.1e-71 273.9 210 70.0
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 1.5e-71 273.5 229 66.8
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 1.5e-71 273.5 226 65.0
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 4.3e-71 271.9 195 71.8
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 4.3e-71 271.9 227 65.2
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 4.3e-71 271.9 210 68.1
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 5.7e-71 271.6 184 76.1
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 7.4e-71 271.2 229 65.1
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 1.3e-70 270.4 228 64.0
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 2.1e-70 269.6 149 85.2
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 2.1e-70 269.6 150 88.0
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 3.7e-70 268.9 155 84.5
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 3.7e-70 268.9 228 68.0
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 4.8e-70 268.5 159 81.8
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 8.2e-70 267.7 230 64.8
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 1.1e-69 267.3 250 60.0
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 1.1e-69 267.3 186 73.1
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 1.8e-69 266.5 201 68.7
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 1.8e-69 266.5 192 70.3
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 2.4e-69 266.2 235 63.8
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.4e-69 266.2 193 70.5
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 3.1e-69 265.8 151 82.1
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 4.1e-69 265.4 176 76.1
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 5.3e-69 265.0 143 88.1
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 9.0e-69 264.2 180 74.4
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 1.5e-68 263.5 185 71.9
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 2.0e-68 263.1 166 78.3
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.0e-68 263.1 228 64.0
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 2.0e-68 263.1 225 63.1
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 3.4e-68 262.3 187 70.6
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 3.4e-68 262.3 218 65.6
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 1.7e-67 260.0 194 70.1
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 1.7e-67 260.0 194 70.1
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 2.2e-67 259.6 229 61.6
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 2.2e-67 259.6 179 76.5
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.9e-67 259.2 190 72.1
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 5.0e-67 258.5 221 66.1
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 6.5e-67 258.1 208 65.4
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 8.4e-67 257.7 152 79.6
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 8.4e-67 257.7 206 68.9
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.1e-66 257.3 231 62.3
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 1.4e-66 256.9 168 75.0
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.4e-66 256.9 151 82.1
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 2.5e-66 256.1 213 64.3
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 2.5e-66 256.1 168 74.4
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 9.3e-66 254.2 218 64.2
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 1.2e-65 253.8 228 60.1
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 1.2e-65 253.8 152 80.9
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 1.6e-65 253.4 216 64.8
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.7e-65 252.7 138 87.7
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 2.7e-65 252.7 215 64.7
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 6.1e-65 251.5 166 76.5
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 6.1e-65 251.5 166 76.5
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 6.1e-65 251.5 210 64.8
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 1.0e-64 250.8 177 72.3
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 1.3e-64 250.4 177 72.9
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 1.8e-64 250.0 216 63.9
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.3e-64 249.6 137 86.9
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 6.7e-64 248.1 156 76.3
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 1.5e-63 246.9 133 88.7
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 3.3e-63 245.7 186 69.9
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 4.3e-63 245.4 203 62.6
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 1.6e-62 243.4 219 63.0
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.8e-61 240.0 198 63.1
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.4e-61 239.6 129 89.1
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 1.2e-60 237.3 128 89.1
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.7e-59 233.4 178 70.8
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 1.6e-57 226.9 162 66.7
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 6.7e-56 221.5 183 62.3
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 2.5e-50 203.0 186 58.1
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.3e-46 190.7 98 87.8
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 2.0e-44 183.3 90 93.3
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 4.7e-41 172.2 130 62.3
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 3.0e-40 169.5 171 50.9
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 2.0e-39 166.8 176 55.1
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 9.7e-39 164.5 178 54.5
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 4.1e-37 159.1 163 57.7
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 6.5e-35 151.8 75 92.0
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 6.5e-35 151.8 249 42.6
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 2.5e-34 149.8 162 53.7
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 2.3e-32 143.3 80 91.2
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 5.2e-32 142.1 145 55.2
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 6.8e-32 141.7 110 64.5
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 1.2e-31 141.0 108 68.5
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 1.7e-30 137.1 143 55.2
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 5.4e-29 132.1 80 81.2
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.2e-25 120.9 68 82.4
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.2e-22 110.2 56 91.1


User provided reference genes

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