Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03336 Eucalyptus grandis HOM05D008269 ORTHO05D010153 1.1e-60 236.5 125 100.0
Eucgr.K03334 Eucalyptus grandis HOM05D008269 ORTHO05D010153 2.5e-36 155.6 126 67.5
Eucgr.K03333 Eucalyptus grandis HOM05D008269 ORTHO05D010153 1.8e-31 139.4 125 61.6
Eucgr.K03335 Eucalyptus grandis HOM05D008269 ORTHO05D010153 7.0e-31 137.5 175 46.9
PGR047G0001 Punica granatum HOM05D008269 ORTHO05D010153 2.5e-12 75.9 127 37.0
Cpa.g.sc3.272 Carica papaya HOM05D008269 ORTHO05D010153 1.5e-09 66.6 133 36.1
RcHm_v2.0_Chr1g0375121 Rosa chinensis HOM05D008269 ORTHO05D010153 2.0e-09 66.2 133 35.3
Prupe.2G282200 Prunus persica HOM05D008269 ORTHO05D010153 3.4e-09 65.5 127 39.4
Rhsim03G0171400 Rhododendron simsii HOM05D008269 ORTHO05D010153 5.8e-09 64.7 137 39.4
Thecc.03G030800 Theobroma cacao HOM05D008269 ORTHO05D010153 5.8e-09 64.7 125 37.6
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 2.9e-08 62.4 128 36.7
Cfa018156 Carpinus fangiana HOM05D008269 ORTHO05D010153 6.4e-08 61.2 126 37.3
Potri.012G129400 Populus trichocarpa HOM05D008269 ORTHO05D010153 6.4e-08 61.2 132 40.2
Potri.015G131300 Populus trichocarpa HOM05D008269 ORTHO05D010153 1.1e-07 60.5 127 38.6
Aqoxy7G00619 Aquilegia oxysepala HOM05D008269 ORTHO05D010153 1.4e-07 60.1 132 34.1
Sabra12G0097300 Salix brachista HOM05D008269 ORTHO05D010153 1.4e-07 60.1 125 38.4
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.9e-07 59.7 127 39.4
Ciclev10006184m.g Citrus clementina HOM05D008269 ORTHO05D010153 2.4e-07 59.3 133 38.3
FvH4_7g28161 Fragaria vesca HOM05D008269 ORTHO05D010153 2.4e-07 59.3 127 39.4
FAN10G2987 Fragaria x ananassa HOM05D008269 ORTHO05D010153 3.2e-07 58.9 134 31.3
CANSAT21G0510 Cannabis sativa HOM05D008269 ORTHO05D010153 5.4e-07 58.2 133 38.3
VMungo0464G1635 Vigna mungo HOM05D008269 ORTHO05D010153 5.4e-07 58.2 143 35.7
Duzib084G0789 Durio zibethinus HOM05D008269 ORTHO05D010153 9.2e-07 57.4 125 34.4
Atru.chr1.636 Acer truncatum HOM05D008269 ORTHO05D010153 1.2e-06 57.0 62 53.2
FvH4_7g28170 Fragaria vesca HOM05D008269 ORTHO05D010153 1.2e-06 57.0 134 32.1
Thecc.03G161400 Theobroma cacao HOM05D008269 ORTHO05D010153 1.6e-06 56.6 130 33.1
Atru.chr1.635 Acer truncatum HOM05D008269 ORTHO05D010153 2.1e-06 56.2 55 56.4
Manes.06G137900 Manihot esculenta HOM05D008269 ORTHO05D010153 2.1e-06 56.2 125 32.0
Nn1g01219 Nelumbo nucifera HOM05D008269 ORTHO05D010153 2.1e-06 56.2 126 34.1
RcHm_v2.0_Chr1g0375111 Rosa chinensis HOM05D008269 ORTHO05D010153 2.1e-06 56.2 136 33.1
Prupe.2G282100 Prunus persica HOM05D008269 ORTHO05D010153 3.5e-06 55.5 135 32.6
Nn4g26411 Nelumbo nucifera HOM05D008269 ORTHO05D010153 7.8e-06 54.3 43 62.8


User provided reference genes

Program Settings