Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 3.5e-192 674.9 362 100.0
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.7e-114 416.8 345 62.9
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.7e-114 416.8 345 62.9
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 4.1e-108 395.6 328 61.6
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 4.1e-108 395.6 328 61.6
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 5.4e-108 395.2 339 59.3
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 1.6e-107 393.7 337 58.2
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 2.7e-107 392.9 324 60.2
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 6.0e-107 391.7 329 62.6
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 2.3e-106 389.8 337 60.8
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.1e-106 388.7 342 58.2
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 6.6e-106 388.3 325 59.4
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.6e-106 387.9 338 59.2
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-105 387.5 338 58.6
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 3.3e-105 386.0 334 57.2
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 4.3e-105 385.6 335 60.0
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.2e-104 384.0 335 59.7
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 2.1e-104 383.3 339 60.2
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 3.6e-104 382.5 335 59.7
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 4.7e-104 382.1 322 58.7
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.1e-103 380.9 340 58.2
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 2.3e-103 379.8 336 58.6
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 2.3e-103 379.8 336 56.2
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 8.9e-103 377.9 326 58.0
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 1.2e-102 377.5 337 57.9
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.0e-102 376.7 335 59.4
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 3.4e-102 375.9 337 57.3
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 4.4e-102 375.6 344 55.2
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 4.4e-102 375.6 331 58.9
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 5.8e-102 375.2 341 58.1
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 7.6e-102 374.8 335 59.7
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.3e-101 374.0 326 57.7
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.7e-101 373.6 344 55.8
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 1.7e-101 373.6 344 55.8
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.7e-101 373.6 336 54.8
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 2.2e-101 373.2 344 54.9
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.8e-101 372.5 340 57.6
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 3.8e-101 372.5 336 54.5
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 1.0e-98 364.4 355 54.6
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 3.0e-98 362.8 344 56.1
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 8.6e-98 361.3 343 55.4
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 8.6e-98 361.3 366 54.1
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 1.1e-97 360.9 336 55.4
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 1.6e-96 357.1 335 55.2
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 3.6e-96 355.9 331 56.8
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 3.1e-95 352.8 344 52.9
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 7.6e-94 348.2 347 54.2
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 1.3e-93 347.4 343 53.6
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 6.4e-93 345.1 328 54.0
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.4e-92 344.0 336 53.6
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 1.9e-92 343.6 337 55.2
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.3e-92 341.3 338 54.4
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.0e-90 337.8 332 54.5
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 2.3e-90 336.7 330 52.7
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 3.0e-90 336.3 328 52.7
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 5.1e-90 335.5 333 51.7
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 5.1e-90 335.5 330 52.4
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 1.1e-89 334.3 350 52.9
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 3.3e-89 332.8 332 51.2
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 3.3e-89 332.8 339 52.5
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 5.6e-89 332.0 330 52.1
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 2.8e-88 329.7 350 52.0
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 6.2e-88 328.6 337 52.2
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 6.2e-88 328.6 343 52.5
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 6.2e-88 328.6 336 53.3
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 6.2e-88 328.6 336 53.0
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.2e-88 328.6 337 52.8
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.4e-87 327.4 338 52.4
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 1.4e-87 327.4 352 48.9
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.8e-87 327.0 336 52.7
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.8e-87 327.0 336 52.7
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 2.4e-87 326.6 332 53.0
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 2.4e-87 326.6 349 50.4
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 6.9e-87 325.1 343 51.9
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 9.0e-87 324.7 327 51.7
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 2.0e-86 323.6 341 50.4
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 2.0e-86 323.6 330 51.5
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 2.6e-86 323.2 345 51.3
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 3.4e-86 322.8 330 51.2
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 7.6e-86 321.6 333 52.0
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 7.6e-86 321.6 341 51.0
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 9.9e-86 321.2 343 50.1
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 1.7e-85 320.5 327 50.8
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 2.9e-85 319.7 330 55.2
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 1.1e-84 317.8 343 49.9
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.4e-84 316.6 347 49.0
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 3.2e-84 316.2 341 51.0
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 3.2e-84 316.2 332 50.6
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 9.3e-84 314.7 329 46.8
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 9.3e-84 314.7 352 49.4
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 1.3e-77 294.3 335 49.3
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 8.4e-77 291.6 337 51.0
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 2.3e-74 283.5 221 64.3
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 3.9e-74 282.7 219 64.4
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 3.1e-71 273.1 350 46.0
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 1.6e-67 260.8 237 56.5
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 5.7e-65 252.3 334 47.6
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 4.8e-64 249.2 235 55.3
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 2.4e-63 246.9 332 44.0
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 1.4e-60 237.7 283 47.3
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 3.2e-60 236.5 375 35.7
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 2.7e-59 233.4 328 41.2
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 4.5e-54 216.1 311 42.4
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 5.5e-52 209.1 147 66.0
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 5.3e-47 192.6 212 48.1
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.0e-46 190.7 212 50.0
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.2e-45 187.2 208 47.6
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.9e-44 184.1 208 48.6
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.2e-44 182.2 208 48.6
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 5.2e-42 176.0 130 68.5
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 4.8e-40 169.5 206 47.1
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 5.9e-38 162.5 124 65.3
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 3.6e-35 153.3 238 35.7
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 2.3e-34 150.6 128 52.3
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.6e-33 147.1 104 70.2
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 1.1e-28 131.7 143 44.8
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.0e-27 125.6 210 39.5
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 7.8e-14 82.4 159 35.8
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.8e-13 80.1 48 77.1
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.6e-13 79.0 45 82.2
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 4.3e-12 76.6 161 30.4
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-11 74.7 45 77.8


User provided reference genes

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