Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 5.9e-294 1013.4 509 100.0
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 1.4e-210 736.5 512 69.5
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 2.5e-204 715.7 525 67.2
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 8.2e-203 710.7 512 66.6
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 1.4e-202 709.9 514 67.1
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 2.6e-201 705.7 510 66.7
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 1.7e-195 686.4 511 65.8
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 8.2e-195 684.1 552 60.9
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 2.6e-193 679.1 511 64.0
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.0e-192 677.2 518 64.5
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 1.7e-192 676.4 511 64.4
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 3.8e-192 675.2 511 64.6
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.5e-191 672.5 511 64.6
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.5e-191 672.5 511 63.4
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 9.4e-191 670.6 510 63.9
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 1.2e-190 670.2 511 63.8
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 2.1e-190 669.5 511 63.8
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 6.1e-190 667.9 511 63.4
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 6.1e-190 667.9 511 65.2
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 6.1e-190 667.9 510 63.3
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 2.3e-189 666.0 522 62.8
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 6.7e-189 664.5 529 61.6
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 3.3e-188 662.1 510 61.8
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 4.4e-188 661.8 509 62.5
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 1.1e-186 657.1 511 63.0
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 1.8e-186 656.4 514 61.3
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 5.3e-186 654.8 511 63.0
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 9.1e-186 654.1 511 63.0
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 9.1e-186 654.1 511 63.0
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 1.5e-185 653.3 510 63.3
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 2.2e-184 649.4 510 62.2
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 3.8e-184 648.7 511 63.4
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 1.1e-183 647.1 509 61.7
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 1.4e-183 646.7 510 62.0
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 3.6e-182 642.1 549 58.7
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 3.0e-181 639.0 509 62.1
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 1.5e-180 636.7 513 61.2
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 4.4e-180 635.2 513 61.6
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 7.4e-180 634.4 541 59.1
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 7.4e-180 634.4 512 60.4
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 9.7e-180 634.0 510 60.0
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 1.3e-179 633.6 510 60.6
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 1.1e-178 630.6 517 59.6
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 1.4e-178 630.2 512 60.0
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 3.1e-178 629.0 512 59.8
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 3.1e-178 629.0 511 60.5
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 5.3e-178 628.2 511 60.1
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 3.5e-177 625.5 512 59.4
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 1.0e-176 624.0 483 63.6
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 2.9e-176 622.5 516 58.7
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 3.8e-176 622.1 514 58.9
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 5.0e-176 621.7 520 60.6
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 8.5e-176 620.9 511 60.1
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 1.9e-175 619.8 515 60.2
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 9.4e-175 617.5 511 60.3
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 4.7e-174 615.1 511 59.9
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 6.1e-174 614.8 513 58.3
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.0e-173 614.0 513 59.6
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 1.4e-173 613.6 516 58.9
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 8.8e-173 610.9 513 59.1
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 2.0e-172 609.8 512 59.0
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 2.6e-172 609.4 514 58.8
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 9.7e-172 607.4 513 59.1
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 3.7e-171 605.5 513 59.1
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 6.3e-171 604.7 514 58.6
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 8.2e-171 604.4 510 56.3
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 2.4e-170 602.8 515 58.4
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 2.4e-170 602.8 513 58.9
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 5.3e-170 601.7 520 57.9
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 5.3e-170 601.7 513 58.1
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 2.0e-169 599.7 520 58.1
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 2.0e-169 599.7 520 58.1
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 5.9e-169 598.2 517 57.1
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 2.9e-168 595.9 520 57.7
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 8.5e-168 594.3 497 59.0
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 5.5e-167 591.7 510 56.9
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 7.2e-167 591.3 496 59.5
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 1.6e-166 590.1 513 57.3
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 4.7e-166 588.6 513 56.7
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 1.8e-165 586.6 512 57.0
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 1.7e-163 580.1 552 54.3
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 2.4e-162 576.2 583 52.3
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 1.1e-159 567.4 509 57.8
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 7.2e-159 564.7 519 56.1
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 4.7e-158 562.0 460 60.2
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 4.0e-157 558.9 436 64.0
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 4.0e-157 558.9 453 60.3
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 5.2e-157 558.5 531 55.7
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 9.8e-156 554.3 426 64.8
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.1e-154 550.8 591 49.7
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 1.4e-154 550.4 514 52.7
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 1.8e-154 550.1 463 61.1
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 1.6e-150 537.0 531 52.2
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.8e-141 506.9 513 49.5
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 1.9e-135 486.9 470 51.1
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 4.7e-134 482.3 459 54.2
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 4.0e-133 479.2 384 61.7
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 8.9e-133 478.0 523 48.2
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 2.3e-128 463.4 376 62.2
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 6.9e-117 425.2 339 60.5
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 1.9e-114 417.2 525 43.2
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 1.3e-104 384.4 325 60.6
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 7.4e-103 378.6 533 41.3
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.2e-97 361.3 381 51.4
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 3.0e-96 356.7 387 49.1
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 3.4e-92 343.2 442 47.1
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 4.5e-92 342.8 451 42.4
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 2.8e-86 323.6 348 48.6
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 2.8e-78 297.0 321 49.2
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 4.1e-77 293.1 448 39.1
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 1.0e-75 288.5 427 39.8
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 2.0e-71 274.2 196 66.8
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 3.7e-70 270.0 238 58.0
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 1.2e-65 255.0 385 40.8
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.7e-59 234.6 162 66.0
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 1.2e-57 228.4 359 37.0
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 4.0e-56 223.4 533 30.0
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 1.6e-44 184.9 136 61.8
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 2.0e-44 184.5 135 66.7
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.5e-39 168.3 126 68.3
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.5e-39 168.3 126 68.3
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 1.6e-36 158.3 502 28.3
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.1e-33 147.9 201 39.3
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 1.2e-23 115.5 118 46.6
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 2.2e-22 111.3 60 80.0
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 3.7e-22 110.5 220 34.1
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.0e-19 102.4 57 73.7
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 6.6e-19 99.8 112 48.2
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 6.6e-19 99.8 112 48.2
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 4.3e-18 97.1 53 73.6
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 9.5e-18 95.9 52 76.9
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 8.9e-16 89.4 65 64.6
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.9e-14 84.3 65 58.5
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 2.1e-12 78.2 95 44.2


User provided reference genes

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