Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03113 Eucalyptus grandis HOM05D007762 ORTHO05D008066 1.9e-147 525.8 258 100.0
GSVIVG01034144001 Vitis vinifera HOM05D007762 ORTHO05D008066 3.9e-36 156.0 263 40.7
Cfa017354 Carpinus fangiana HOM05D007762 ORTHO05D008066 3.7e-34 149.4 266 39.5
MD12G1144400 Malus domestica HOM05D007762 ORTHO05D008066 3.7e-34 149.4 266 38.3
CsaV3_3G034800 Cucumis sativus L. HOM05D007762 ORTHO05D008066 4.1e-33 146.0 265 37.7
PGR004G1606 Punica granatum HOM05D007762 ORTHO05D008066 1.5e-32 144.1 271 41.3
QL07p048844 Quercus lobata HOM05D007762 ORTHO05D008066 2.6e-32 143.3 262 38.9
ClCG10G021240 Citrullus lanatus HOM05D007762 ORTHO05D008066 3.2e-30 136.3 265 36.6
Manes.09G092000 Manihot esculenta HOM05D007762 ORTHO05D008066 3.2e-30 136.3 238 38.2
Eucgr.A01283 Eucalyptus grandis HOM05D007762 ORTHO05D008066 7.2e-30 135.2 244 38.5
RcHm_v2.0_Chr3g0466291 Rosa chinensis HOM05D007762 ORTHO05D008066 1.2e-29 134.4 268 39.2
TWI74G1309 Tripterygium wilfordii HOM05D007762 ORTHO05D008066 1.2e-29 134.4 263 39.9
Potri.006G087300 Populus trichocarpa HOM05D007762 ORTHO05D008066 1.8e-28 130.6 262 36.6
Thecc.05G036900 Theobroma cacao HOM05D007762 ORTHO05D008066 1.8e-28 130.6 259 36.7
Sed0022945 Sechium edule HOM05D007762 ORTHO05D008066 3.0e-28 129.8 262 35.1
Hma1.2p1_1889F.1_g306660 Hydrangea macrophylla HOM05D007762 ORTHO05D008066 5.1e-28 129.0 261 35.6
Hma1.2p1_2197F.1_g316916 Hydrangea macrophylla HOM05D007762 ORTHO05D008066 5.1e-28 129.0 261 35.6
MD04G1131300 Malus domestica HOM05D007762 ORTHO05D008066 5.1e-28 129.0 236 38.6
Dinv35582 Davidia involucrata HOM05D007762 ORTHO05D008066 6.7e-28 128.6 278 35.3
CiPaw.10G146800 Carya illinoinensis HOM05D007762 ORTHO05D008066 8.8e-28 128.3 264 36.4
Dinv37157 Davidia involucrata HOM05D007762 ORTHO05D008066 1.1e-27 127.9 265 36.6
Prupe.6G257800 Prunus persica HOM05D007762 ORTHO05D008066 2.0e-27 127.1 270 36.7
TAR633G0209 Trochodendron aralioides HOM05D007762 ORTHO05D008066 1.3e-26 124.4 273 37.0
Rhsim05G0194300 Rhododendron simsii HOM05D007762 ORTHO05D008066 1.7e-26 124.0 266 36.8
Sabra06G0066600 Salix brachista HOM05D007762 ORTHO05D003096 1.7e-26 124.0 263 37.3
Duzib106G0002 Durio zibethinus HOM05D007762 ORTHO05D008066 8.2e-26 121.7 260 36.5
Phvul.008G119100 Phaseolus vulgaris HOM05D007762 ORTHO05D008066 8.2e-26 121.7 263 35.0
CiPaw.09G195100 Carya illinoinensis HOM05D007762 ORTHO05D008066 2.4e-25 120.2 241 36.5
FAN05G0447 Fragaria x ananassa HOM05D007762 ORTHO05D008066 3.1e-25 119.8 266 38.3
Oeu023077.1 Olea europaea HOM05D007762 ORTHO05D008066 4.1e-25 119.4 265 36.6
Ciclev10013354m.g Citrus clementina HOM05D007762 ORTHO05D008066 9.1e-25 118.2 266 36.1
Nitab4.5_0008097g0020 Nicotiana tabacum HOM05D007762 ORTHO05D008066 1.2e-24 117.9 263 34.6
COL.COLO4_14776 Corchorus olitorius HOM05D007762 ORTHO05D008066 2.6e-24 116.7 259 34.0
FAN09G1623 Fragaria x ananassa HOM05D007762 ORTHO05D008066 2.6e-24 116.7 265 37.7
FvH4_6g13420 Fragaria vesca HOM05D007762 ORTHO05D008066 4.5e-24 115.9 265 37.4
Actinidia11265 Actinidia chinensis HOM05D007762 ORTHO05D008066 7.7e-24 115.2 263 35.0
FAN14G2701 Fragaria x ananassa HOM05D007762 ORTHO05D008066 1.3e-23 114.4 263 36.5
Nitab4.5_0000527g0210 Nicotiana tabacum HOM05D007762 ORTHO05D008066 1.7e-23 114.0 264 33.7
Gorai.001G249600 Gossypium raimondii HOM05D007762 ORTHO05D008066 2.2e-23 113.6 253 34.4
Gohir.D13G098400 Gossypium hirsutum HOM05D007762 ORTHO05D008066 3.8e-23 112.8 256 34.0
Glyma.07G134000 Glycine max HOM05D007762 ORTHO05D008066 6.5e-23 112.1 267 34.8
Gohir.A13G092305 Gossypium hirsutum HOM05D007762 ORTHO05D008066 8.5e-23 111.7 253 34.0
Gohir.A13G092310 Gossypium hirsutum HOM05D007762 ORTHO05D008066 8.5e-23 111.7 253 34.0
FAN02G3004 Fragaria x ananassa HOM05D007762 ORTHO05D008066 1.5e-22 110.9 265 37.0
Glyma.18G183600 Glycine max HOM05D007762 ORTHO05D008066 1.9e-22 110.5 267 34.1
CANSAT11G0018 Cannabis sativa HOM05D007762 ORTHO05D008066 2.5e-22 110.2 263 34.6
MELO3C009249.2 Cucumis melo HOM05D007762 ORTHO05D008066 3.2e-22 109.8 248 34.3
PGR031G1528 Punica granatum HOM05D007762 ORTHO05D008066 3.2e-22 109.8 262 36.6
Lalb_Chr19g0125241 Lupinus albus HOM05D007762 ORTHO05D008066 1.2e-21 107.8 263 35.4
Lj3g0025123 Lotus japonicus HOM05D007762 ORTHO05D008066 2.7e-21 106.7 263 33.8
Cc10_g11770 Coffea canephora HOM05D007762 ORTHO05D008066 3.0e-20 103.2 240 34.6
vmacro20167 Vaccinium macrocarpon HOM05D007762 ORTHO05D008066 2.0e-19 100.5 271 33.6
Aqoxy1G00900 Aquilegia oxysepala HOM05D007762 ORTHO05D008066 7.5e-19 98.6 282 33.0
Atru.chr8.1998 Acer truncatum HOM05D007762 ORTHO05D008066 9.7e-19 98.2 274 32.8
Peaxi162Scf00330g00715 Petunia axillaris HOM05D007762 ORTHO05D008066 1.3e-18 97.8 234 35.0
Phvul.010G014900 Phaseolus vulgaris HOM05D007762 ORTHO05D008066 6.3e-18 95.5 263 31.9
arahy.Tifrunner.gnm1.ann1.LX2K9J Arachis hypogaea HOM05D007762 ORTHO05D008066 1.6e-16 90.9 262 31.3
CAN.G92.14 Capsicum annuum HOM05D007762 ORTHO05D008066 3.5e-16 89.7 242 34.3
Cc06_g02460 Coffea canephora HOM05D007762 ORTHO05D008066 1.0e-15 88.2 266 30.8
Oeu001858.1 Olea europaea HOM05D007762 ORTHO05D008066 1.7e-15 87.4 249 33.3
TPR.G1723 Trifolium pratense HOM05D007762 ORTHO05D008066 3.8e-15 86.3 263 31.9
Solyc10g086560.3 Solanum lycopersicum HOM05D007762 ORTHO05D008066 3.2e-14 83.2 234 32.5
Sopen10g035940 Solanum pennellii HOM05D007762 ORTHO05D008066 5.5e-14 82.4 237 32.5
Potri.016G100100 Populus trichocarpa HOM05D007762 ORTHO05D008066 1.2e-13 81.3 261 31.4
Lsat_1_v5_gn_9_33361 Lactuca sativa HOM05D007762 ORTHO05D008066 1.6e-13 80.9 233 31.8
Medtr7g062260 Medicago truncatula HOM05D007762 ORTHO05D008066 1.6e-13 80.9 256 30.9
Psat3g137360 Pisum sativum HOM05D007762 ORTHO05D008066 2.7e-13 80.1 260 30.0
MSTRG.26781 Avicennia marina HOM05D007762 ORTHO05D008066 4.7e-13 79.3 265 31.3
Duzib093G0438 Durio zibethinus HOM05D007762 ORTHO05D008066 1.4e-12 77.8 228 32.5
MSTRG.5650 Avicennia marina HOM05D007762 ORTHO05D008066 1.8e-12 77.4 244 33.2
Nn2g11166 Nelumbo nucifera HOM05D007762 ORTHO05D008066 1.5e-11 74.3 261 31.0
Aa31LG1G22530 Aethionema arabicum HOM05D012592 ORTHO05D008066 3.4e-11 73.2 266 30.5
DCAR_024059 Daucus carota HOM05D007762 ORTHO05D008066 5.7e-11 72.4 245 31.0
MBI05_g29690_MAGBIO Magnolia biondii HOM05D007762 ORTHO05D008066 4.8e-10 69.3 249 32.5
AL4G34600 Arabidopsis lyrata HOM05D005320 ORTHO05D008066 1.8e-09 67.4 96 42.7
Peaxi162Scf00165g00078 Petunia axillaris HOM05D007762 ORTHO05D008066 1.8e-09 67.4 263 28.5
AT2G37678 Arabidopsis thaliana HOM05D005320 ORTHO05D008066 2.4e-09 67.0 97 42.3
Migut.J00315 Erythranthe guttata HOM05D007762 ORTHO05D008066 4.1e-09 66.2 135 36.3
PGSC0003DMG402019151 Solanum tuberosum HOM05D007762 ORTHO05D008066 4.1e-09 66.2 222 29.7
arahy.Tifrunner.gnm1.ann1.NCI3TY Arachis hypogaea HOM05D007762 ORTHO05D008066 5.4e-09 65.9 107 40.2
A10p33410 Brassica napus HOM05D012592 ORTHO05D008066 9.1e-09 65.1 252 28.2
CARHR131870 Cardamine hirsuta HOM05D005320 ORTHO05D008066 2.0e-08 63.9 93 39.8
BraA10t45372Z Brassica rapa HOM05D012592 ORTHO05D008066 2.7e-08 63.5 251 27.9
BcaC02g11890 Brassica carinata HOM05D005320 ORTHO05D008066 3.5e-08 63.2 114 37.7
C04p10260 Brassica napus HOM05D005320 ORTHO05D008066 3.5e-08 63.2 89 40.4
BcaB02g09262 Brassica carinata HOM05D005320 ORTHO05D008066 4.5e-08 62.8 89 39.3
Thhalv10017273m.g Eutrema salsugineum HOM05D005320 ORTHO05D008066 5.9e-08 62.4 90 38.9
PSO339G2571 Papaver somniferum HOM05D007762 ORTHO05D008066 5.9e-08 62.4 254 29.9
A05p08290 Brassica napus HOM05D005320 ORTHO05D008066 1.3e-07 61.2 94 38.3
BolC4t22624H Brassica oleracea HOM05D005320 ORTHO05D008066 1.3e-07 61.2 129 34.1
MELO3C003141.2 Cucumis melo HOM05D041730 ORTHO05D034779 1.7e-07 60.8 78 44.9
Carub.0004s1962 Capsella rubella HOM05D005320 ORTHO05D008066 2.2e-07 60.5 103 36.9
Migut.L01955 Erythranthe guttata HOM05D007762 ORTHO05D008066 2.9e-07 60.1 260 29.6
BcaB06g29018 Brassica carinata HOM05D005320 ORTHO05D008066 5.0e-07 59.3 109 35.8
BolC4t28116H Brassica oleracea HOM05D005320 ORTHO05D007922 8.5e-07 58.5 108 38.0
BraA04t18361Z Brassica rapa HOM05D005320 ORTHO05D008066 8.5e-07 58.5 106 34.9
Hund10692 Selenicereus undatus HOM05D021339 ORTHO05D008066 8.5e-07 58.5 248 29.0
ClCG04G008070 Citrullus lanatus HOM05D041730 ORTHO05D034779 1.1e-06 58.2 78 42.3
Thhalv10015459m.g Eutrema salsugineum HOM05D012592 ORTHO05D008066 1.1e-06 58.2 80 42.5
A04p28870 Brassica napus HOM05D005320 ORTHO05D007922 1.5e-06 57.8 106 34.9
CsaV3_4G025130 Cucumis sativus L. HOM05D041730 ORTHO05D034779 1.9e-06 57.4 79 44.3
THA.LOC104806558 Tarenaya hassleriana HOM05D005320 ORTHO05D008066 2.5e-06 57.0 85 43.5
BcaC02g07500 Brassica carinata HOM05D005320 ORTHO05D008066 4.2e-06 56.2 111 35.1
C04p66130 Brassica napus HOM05D005320 ORTHO05D007922 4.2e-06 56.2 111 35.1
Aa31sc70G60 Aethionema arabicum HOM05D005320 ORTHO05D008066 7.2e-06 55.5 65 46.2
AUR62042387 Chenopodium quinoa HOM05D021339 ORTHO05D008066 7.2e-06 55.5 77 41.6


User provided reference genes

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