Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02997 Eucalyptus grandis HOM05D007172 ORTHO05D009267 4.0e-83 313.5 407 100.0
Gorai.002G261200 Gossypium raimondii HOM05D007172 ORTHO05D009267 2.6e-42 177.9 149 61.7
MD12G1160500 Malus domestica HOM05D007172 ORTHO05D009267 3.4e-42 177.6 142 65.5
RcHm_v2.0_Chr3g0463821 Rosa chinensis HOM05D007172 ORTHO05D009267 3.4e-42 177.6 142 65.5
Prupe.6G271000 Prunus persica HOM05D007172 ORTHO05D009267 1.7e-41 175.3 142 65.5
Gohir.D01G215100 Gossypium hirsutum HOM05D007172 ORTHO05D009267 2.9e-41 174.5 149 61.1
FvH4_6g11981 Fragaria vesca HOM05D007172 ORTHO05D009267 6.5e-41 173.3 144 62.5
FAN14G1264 Fragaria x ananassa HOM05D007172 ORTHO05D009267 6.5e-41 173.3 144 62.5
FAN09G1061 Fragaria x ananassa HOM05D007172 ORTHO05D009267 8.5e-41 172.9 144 61.8
FAN14G1160 Fragaria x ananassa HOM05D007172 ORTHO05D009267 8.5e-41 172.9 144 62.5
Gohir.A01G225400 Gossypium hirsutum HOM05D007172 ORTHO05D009267 5.5e-40 170.2 147 60.5
Cfa017253 Carpinus fangiana HOM05D007172 ORTHO05D009267 7.2e-40 169.9 150 62.7
PGR004G2241 Punica granatum HOM05D007172 ORTHO05D009267 9.4e-40 169.5 154 60.4
FAN02G2761 Fragaria x ananassa HOM05D007172 ORTHO05D009267 2.1e-39 168.3 144 60.4
Haze_20955 Corylus avellana HOM05D007172 ORTHO05D009267 2.7e-39 167.9 150 61.3
FAN05G4216 Fragaria x ananassa HOM05D007172 ORTHO05D009267 2.7e-39 167.9 144 60.4
GSVIVG01024665001 Vitis vinifera HOM05D007172 ORTHO05D009267 2.7e-39 167.9 151 59.6
CiPaw.09G206300 Carya illinoinensis HOM05D007172 ORTHO05D009267 6.1e-39 166.8 149 61.7
Ciclev10011394m.g Citrus clementina HOM05D007172 ORTHO05D009267 1.0e-38 166.0 144 59.7
CANSAT35G0540 Cannabis sativa HOM05D007172 ORTHO05D009267 1.4e-38 165.6 141 63.1
Thecc.05G021800 Theobroma cacao HOM05D007172 ORTHO05D009267 2.3e-38 164.9 150 58.7
THA.LOC104823283 Tarenaya hassleriana HOM05D007172 ORTHO05D009267 3.0e-38 164.5 142 62.0
TWI74G0200 Tripterygium wilfordii HOM05D007172 ORTHO05D009267 3.0e-38 164.5 151 58.9
ClCG04G007230 Citrullus lanatus HOM05D007172 ORTHO05D009267 5.1e-38 163.7 148 60.1
Dinv14529 Davidia involucrata HOM05D007172 ORTHO05D009267 6.7e-38 163.3 147 61.2
Dinv35510 Davidia involucrata HOM05D007172 ORTHO05D009267 6.7e-38 163.3 147 61.2
Hma1.2p1_0244F.1_g101240 Hydrangea macrophylla HOM05D007172 ORTHO05D009267 6.7e-38 163.3 150 58.7
AL3G20120 Arabidopsis lyrata HOM05D007172 ORTHO05D009267 8.8e-38 162.9 144 59.0
QL11p035953 Quercus lobata HOM05D007172 ORTHO05D009267 8.8e-38 162.9 141 62.4
BcaB04g18558 Brassica carinata HOM05D007172 ORTHO05D009267 1.1e-37 162.5 144 59.7
Hma1.2p1_0244F.1_g101250 Hydrangea macrophylla HOM05D007172 ORTHO05D009267 1.1e-37 162.5 148 59.5
Manes.08G087900 Manihot esculenta HOM05D007172 ORTHO05D009267 3.3e-37 161.0 142 60.6
Aqoxy1G00702 Aquilegia oxysepala HOM05D007172 ORTHO05D009267 5.7e-37 160.2 144 56.9
Thhalv10020196m.g Eutrema salsugineum HOM05D007172 ORTHO05D009267 5.7e-37 160.2 144 60.4
TAR636G1500 Trochodendron aralioides HOM05D007172 ORTHO05D009267 5.7e-37 160.2 142 57.0
MELO3C003226.2 Cucumis melo HOM05D007172 ORTHO05D009267 1.7e-36 158.7 148 58.8
BcaC01g04211 Brassica carinata HOM05D007172 ORTHO05D009267 2.8e-36 157.9 144 59.0
C03p43820 Brassica napus HOM05D007172 ORTHO05D009267 2.8e-36 157.9 144 59.0
BolC3t16650H Brassica oleracea HOM05D007172 ORTHO05D009267 2.8e-36 157.9 144 59.0
Actinidia01117 Actinidia chinensis HOM05D007172 ORTHO05D009267 3.7e-36 157.5 150 60.7
AT3G09060 Arabidopsis thaliana HOM05D007172 ORTHO05D009267 4.8e-36 157.1 144 57.6
CARHR083420 Cardamine hirsuta HOM05D007172 ORTHO05D009267 8.2e-36 156.4 144 58.3
Duzib093G1512 Durio zibethinus HOM05D007172 ORTHO05D009267 8.2e-36 156.4 145 58.6
Sp3g07510 Schrenkiella parvula HOM05D007172 ORTHO05D009267 1.1e-35 156.0 144 57.6
arahy.Tifrunner.gnm1.ann1.1Q23J3 Arachis hypogaea HOM05D007172 ORTHO05D009267 1.4e-35 155.6 150 54.0
CsaV3_4G026020 Cucumis sativus L. HOM05D007172 ORTHO05D009267 3.1e-35 154.5 149 55.7
arahy.Tifrunner.gnm1.ann1.F3RMTH Arachis hypogaea HOM05D007172 ORTHO05D009267 5.3e-35 153.7 150 53.3
BraA03t12787Z Brassica rapa HOM05D007172 ORTHO05D009267 5.3e-35 153.7 144 57.6
Aa31LG3G1590 Aethionema arabicum HOM05D007172 ORTHO05D009267 9.1e-35 152.9 144 56.2
A03p36160 Brassica napus HOM05D007172 ORTHO05D009267 1.2e-34 152.5 144 56.2
Sed0007776 Sechium edule HOM05D007172 ORTHO05D009267 1.5e-34 152.1 145 56.6
Carub.0003s0822 Capsella rubella HOM05D007172 ORTHO05D009267 7.7e-34 149.8 143 55.9
Lj2C80T7 Lonicera japonica HOM05D007172 ORTHO05D009267 1.7e-33 148.7 150 56.0
Nn2g11372 Nelumbo nucifera HOM05D007172 ORTHO05D009267 1.7e-33 148.7 142 53.5
SHI12786 Sapria himalayana HOM05D007172 ORTHO05D009267 2.2e-33 148.3 144 56.9
CSS0033736 Camellia sinensis var. sinensis HOM05D007172 ORTHO05D009267 3.8e-33 147.5 148 58.1
CSS0036168 Camellia sinensis var. sinensis HOM05D007172 ORTHO05D009267 3.8e-33 147.5 148 58.1
COL.COLO4_14594 Corchorus olitorius HOM05D007172 ORTHO05D009267 3.8e-33 147.5 143 54.5
MBI05_g03458_MAGBIO Magnolia biondii HOM05D007172 ORTHO05D009267 8.5e-33 146.4 153 55.6
Potri.016G111600 Populus trichocarpa HOM05D007172 ORTHO05D009267 1.4e-32 145.6 148 55.4
Lalb_Chr03g0043001 Lupinus albus HOM05D007172 ORTHO05D009267 1.6e-31 142.1 150 52.0
Psat3g131160 Pisum sativum HOM05D007172 ORTHO05D009267 3.6e-31 141.0 150 51.3
Ca_07613_v3 Cicer arietinum L. HOM05D007172 ORTHO05D009267 4.7e-31 140.6 150 52.7
Sabra16G0107800 Salix brachista HOM05D007172 ORTHO05D009267 4.7e-31 140.6 148 53.4
PSO384G3372 Papaver somniferum HOM05D007172 ORTHO05D009267 6.1e-31 140.2 151 52.3
Glyma.07G145700 Glycine max HOM05D007172 ORTHO05D009267 7.9e-31 139.8 149 54.4
Lj1g0020442 Lotus japonicus HOM05D007172 ORTHO05D009267 3.0e-30 137.9 150 53.3
PSO339G1228 Papaver somniferum HOM05D007172 ORTHO05D009267 5.1e-30 137.1 144 53.5
Sc07g0006830 Simmondsia chinensis HOM05D007172 ORTHO05D009267 5.1e-30 137.1 144 51.4
TPR.G1551 Trifolium pratense HOM05D007172 ORTHO05D009267 5.1e-30 137.1 150 50.7
Sopen09g007080 Solanum pennellii HOM05D007172 ORTHO05D009267 8.8e-30 136.3 150 52.7
PGSC0003DMG400020346 Solanum tuberosum HOM05D007172 ORTHO05D009267 8.8e-30 136.3 150 52.7
Solyc09g014210.3 Solanum lycopersicum HOM05D007172 ORTHO05D009267 1.1e-29 136.0 150 52.0
EL10Ac5g11526 Beta vulgaris HOM05D007172 ORTHO05D009267 2.6e-29 134.8 151 46.4
Rhsim04G0166200 Rhododendron simsii HOM05D007172 ORTHO05D009267 4.4e-29 134.0 150 50.7
Nitab4.5_0000008g0800 Nicotiana tabacum HOM05D007172 ORTHO05D009267 9.7e-29 132.9 153 50.3
Hund23873 Selenicereus undatus HOM05D007172 ORTHO05D009267 9.7e-29 132.9 143 50.3
Cc06_g01640 Coffea canephora HOM05D007172 ORTHO05D009267 2.2e-28 131.7 150 50.0
Phvul.008G107400 Phaseolus vulgaris HOM05D007172 ORTHO05D009267 4.8e-28 130.6 142 52.1
AUR62025815 Chenopodium quinoa HOM05D007172 ORTHO05D009267 6.3e-28 130.2 149 46.3
VMungo1383G0941 Vigna mungo HOM05D007172 ORTHO05D009267 8.2e-28 129.8 149 52.3
Ah.12g060070 Amaranthus hybridus HOM05D007172 ORTHO05D009267 1.1e-27 129.4 141 48.2
CAN.G1003.15 Capsicum annuum HOM05D007172 ORTHO05D009267 1.8e-27 128.6 151 51.0
CDE02G0235 Ceratophyllum demersum HOM05D007172 ORTHO05D009267 1.8e-27 128.6 139 48.2
Nitab4.5_0001837g0040 Nicotiana tabacum HOM05D007172 ORTHO05D009267 5.3e-27 127.1 153 47.7
Lsat_1_v5_gn_9_36040 Lactuca sativa HOM05D007172 ORTHO05D009267 9.1e-27 126.3 148 48.6
AUR62042945 Chenopodium quinoa HOM05D007172 ORTHO05D009267 1.2e-26 125.9 149 45.6
Medtr7g066990 Medicago truncatula HOM05D007172 ORTHO05D009267 2.0e-26 125.2 151 47.7
Migut.J00222 Erythranthe guttata HOM05D007172 ORTHO05D009267 2.6e-26 124.8 148 48.0
SalBow5G3690 Salvia bowleyana HOM05D007172 ORTHO05D009267 4.5e-26 124.0 148 47.3
ATR0618G313 Amborella trichopoda HOM05D007172 ORTHO05D009267 1.7e-25 122.1 145 42.8
MSTRG.5594 Avicennia marina HOM05D007172 ORTHO05D009267 3.2e-24 117.9 150 45.3
DCAR_018726 Daucus carota HOM05D007172 ORTHO05D009267 4.2e-24 117.5 148 43.9
HanXRQChr10g0287011 Helianthus annuus HOM05D007172 ORTHO05D009267 8.0e-23 113.2 135 45.2
MD04G1147200 Malus domestica HOM05D007172 ORTHO05D009267 1.0e-14 86.3 82 53.7
Os01g0852900 Oryza sativa ssp. japonica HOM05D007172 ORTHO05D009267 1.8e-14 85.5 146 39.7
Zm00001eb367330 Zea mays HOM05D007172 ORTHO05D009267 4.0e-14 84.3 147 38.8
SEGI_16355 Sequoiadendron giganteum HOM05D004271 ORTHO05D006011 2.2e-12 78.6 142 31.7
Cpa.g.sc56.116 Carica papaya HOM05D007172 ORTHO05D009267 6.3e-12 77.0 45 80.0
Oeu030527.1 Olea europaea HOM05D000095 ORTHO05D000330 1.1e-11 76.3 114 37.7
AL3G20130 Arabidopsis lyrata HOM05D001641 ORTHO05D001667 1.6e-10 72.4 41 80.5
CDE04G3408 Ceratophyllum demersum HOM05D001641 ORTHO05D009267 4.5e-10 70.9 125 35.2
Duzib106G0549 Durio zibethinus HOM05D007172 ORTHO05D018188 7.2e-08 63.5 41 65.9
Hund12398 Selenicereus undatus HOM05D007155 ORTHO05D003034 1.2e-07 62.8 58 43.1
DCAR_001266 Daucus carota HOM05D007155 ORTHO05D003034 1.6e-07 62.4 62 41.9
MBI02_g21862_MAGBIO Magnolia biondii HOM05D007155 ORTHO05D003034 1.6e-07 62.4 111 30.6
TAR624G1337 Trochodendron aralioides HOM05D007155 ORTHO05D003034 8.0e-07 60.1 68 38.2
Thhalv10009298m.g Eutrema salsugineum HOM05D004271 ORTHO05D006011 1.0e-06 59.7 76 38.2
vmacro12640 Vaccinium macrocarpon HOM05D004271 ORTHO05D006011 1.0e-06 59.7 140 27.1
Aqoxy1G03675 Aquilegia oxysepala HOM05D007155 ORTHO05D003034 1.4e-06 59.3 61 41.0
AL1G17960 Arabidopsis lyrata HOM05D004271 ORTHO05D002107 1.4e-06 59.3 76 35.5
Lj6P606T31 Lonicera japonica HOM05D004271 ORTHO05D006011 1.4e-06 59.3 141 28.4
AT1G07740 Arabidopsis thaliana HOM05D004271 ORTHO05D002107 2.3e-06 58.5 76 35.5
Carub.0011s0004 Capsella rubella HOM05D004271 ORTHO05D006011 2.3e-06 58.5 76 36.8
Potri.011G057900 Populus trichocarpa HOM05D002986 ORTHO05D007611 2.3e-06 58.5 142 29.6
MELO3C014863.2 Cucumis melo HOM05D002986 ORTHO05D003966 3.0e-06 58.2 140 30.0
AagrBONN_evm.TU.Sc2ySwM_362.2678__2679 Anthoceros agrestis HOM05D006749 ORTHO05D008352 5.2e-06 57.4 104 35.6
Nitab4.5_0000610g0200 Nicotiana tabacum HOM05D002453 ORTHO05D002107 5.2e-06 57.4 59 42.4
CARHR007530 Cardamine hirsuta HOM05D004271 ORTHO05D006011 6.8e-06 57.0 76 35.5
PGR142G0445 Punica granatum HOM05D007155 ORTHO05D003034 8.8e-06 56.6 62 35.5
Sabra11G0040100 Salix brachista HOM05D002986 ORTHO05D007611 8.8e-06 56.6 142 28.2


User provided reference genes

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