Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 3.6e-101 371.7 202 100.0
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 1.7e-47 193.4 158 64.6
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 1.9e-41 173.3 111 73.0
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 1.9e-41 173.3 111 73.0
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 7.1e-41 171.4 214 49.5
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 9.3e-41 171.0 108 74.1
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 9.3e-41 171.0 95 82.1
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 1.2e-40 170.6 101 82.2
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.2e-40 170.6 214 49.1
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 1.6e-40 170.2 111 73.9
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 2.7e-40 169.5 95 82.1
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 1.0e-39 167.5 135 63.7
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.0e-39 167.5 97 80.4
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.0e-39 167.5 97 81.4
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 1.3e-39 167.2 95 81.1
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 1.7e-39 166.8 99 79.8
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.7e-39 166.8 97 78.4
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 2.3e-39 166.4 210 50.5
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 2.3e-39 166.4 95 80.0
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 5.1e-39 165.2 219 49.3
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 6.6e-39 164.9 112 69.6
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 6.6e-39 164.9 113 72.6
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 8.7e-39 164.5 111 73.0
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.1e-38 164.1 93 81.7
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.1e-38 164.1 93 81.7
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 1.1e-38 164.1 97 79.4
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 1.5e-38 163.7 212 50.0
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 1.5e-38 163.7 112 69.6
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.5e-38 163.7 112 69.6
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.5e-38 163.7 94 81.9
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 2.5e-38 162.9 135 62.2
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 2.5e-38 162.9 97 78.4
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 2.5e-38 162.9 154 57.8
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 2.5e-38 162.9 90 84.4
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 2.5e-38 162.9 94 79.8
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 4.3e-38 162.2 137 62.8
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 4.3e-38 162.2 111 72.1
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 5.6e-38 161.8 99 77.8
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 5.6e-38 161.8 213 49.8
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 5.6e-38 161.8 100 76.0
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 7.3e-38 161.4 136 61.8
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 7.3e-38 161.4 93 78.5
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 7.3e-38 161.4 214 50.5
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 7.3e-38 161.4 109 71.6
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 9.6e-38 161.0 109 71.6
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 9.6e-38 161.0 91 82.4
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 1.3e-37 160.6 210 50.5
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 1.6e-37 160.2 108 72.2
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.6e-37 160.2 174 53.4
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.6e-37 160.2 89 83.1
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 1.6e-37 160.2 89 84.3
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 3.6e-37 159.1 99 77.8
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 3.6e-37 159.1 111 69.4
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 3.6e-37 159.1 136 61.8
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 3.6e-37 159.1 101 75.2
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 4.8e-37 158.7 111 69.4
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 4.8e-37 158.7 100 75.0
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 6.2e-37 158.3 95 77.9
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 6.2e-37 158.3 166 54.2
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 6.2e-37 158.3 98 75.5
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 8.1e-37 157.9 97 75.3
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 8.1e-37 157.9 139 61.9
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 8.1e-37 157.9 95 75.8
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 8.1e-37 157.9 91 80.2
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 1.1e-36 157.5 203 48.8
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 1.4e-36 157.1 92 77.2
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 1.4e-36 157.1 183 52.5
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.8e-36 156.8 98 74.5
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 1.8e-36 156.8 98 75.5
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 2.4e-36 156.4 135 63.0
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 3.1e-36 156.0 92 79.3
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 3.1e-36 156.0 97 73.2
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 4.0e-36 155.6 209 50.2
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 6.9e-36 154.8 95 76.8
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 6.9e-36 154.8 99 73.7
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 1.5e-35 153.7 98 75.5
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 1.5e-35 153.7 213 47.4
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 4.4e-35 152.1 111 68.5
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 4.4e-35 152.1 89 78.7
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 9.9e-35 151.0 207 46.9
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 3.8e-34 149.1 86 80.2
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 6.4e-34 148.3 89 76.4
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 8.4e-34 147.9 89 77.5
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 1.4e-33 147.1 92 73.9
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 7.1e-33 144.8 93 72.0
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 1.6e-32 143.7 96 70.8
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 4.6e-32 142.1 98 66.3
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 6.0e-32 141.7 92 69.6
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 3.0e-31 139.4 95 67.4
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 5.6e-30 135.2 89 71.9
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 2.1e-29 133.3 87 73.6
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 6.2e-29 131.7 95 65.3
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 1.4e-28 130.6 93 65.6
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 2.4e-28 129.8 72 80.6
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 2.4e-28 129.8 72 80.6
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 2.4e-28 129.8 75 78.7
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 4.5e-27 125.6 95 61.1
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 1.7e-26 123.6 71 77.5
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 6.4e-26 121.7 95 62.1
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.1e-25 120.9 97 61.9
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 1.1e-25 120.9 68 79.4
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 1.4e-25 120.6 97 55.7
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 1.6e-24 117.1 97 58.8
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.8e-23 113.6 79 64.6
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 3.9e-23 112.5 84 63.1
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 1.5e-22 110.5 116 52.6
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 2.8e-21 106.3 87 57.5
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 4.8e-21 105.5 91 53.8
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.8e-20 103.6 95 51.6
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 2.6e-19 99.8 98 57.1
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.9e-18 96.3 90 50.0
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 1.4e-17 94.0 95 56.8
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 9.0e-12 74.7 86 41.9
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 5.8e-11 72.0 56 60.7
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 6.5e-10 68.6 41 73.2
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.4e-09 67.4 52 63.5
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.4e-09 67.4 52 63.5
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 1.4e-09 67.4 54 63.0


User provided reference genes

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