Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 3.3e-155 551.6 267 100.0
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 3.1e-121 438.7 259 79.9
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 7.0e-121 437.6 267 78.3
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 3.3e-118 428.7 268 76.1
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 9.5e-118 427.2 260 78.1
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 2.8e-117 425.6 268 76.1
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 3.6e-117 425.2 268 76.5
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 5.2e-116 421.4 268 75.7
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 2.6e-115 419.1 270 72.6
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 3.4e-115 418.7 268 73.9
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 3.7e-114 415.2 270 72.6
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 3.7e-114 415.2 270 73.0
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 1.1e-113 413.7 268 72.4
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 5.9e-112 407.9 268 73.9
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 1.0e-111 407.1 268 73.5
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 2.9e-111 405.6 270 73.0
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 8.6e-111 404.1 259 74.1
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 8.6e-111 404.1 268 72.4
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 8.6e-111 404.1 270 70.4
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 1.2e-109 400.2 268 71.3
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 1.2e-109 400.2 310 64.5
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 8.0e-109 397.5 267 71.5
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 1.0e-108 397.1 263 73.4
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 3.1e-108 395.6 268 69.0
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 5.2e-108 394.8 268 71.6
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 5.2e-108 394.8 267 70.0
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 5.2e-108 394.8 270 68.5
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 1.2e-107 393.7 270 68.9
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 1.5e-107 393.3 263 73.0
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 2.0e-107 392.9 258 71.3
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 2.6e-107 392.5 268 70.5
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 4.4e-107 391.7 267 67.4
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 7.5e-107 391.0 267 68.9
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 9.8e-107 390.6 269 69.5
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.2e-106 389.4 267 67.4
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 2.9e-106 389.0 270 68.5
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 1.4e-105 386.7 267 68.2
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 2.4e-105 386.0 264 68.6
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 3.2e-105 385.6 268 67.2
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 7.0e-105 384.4 270 67.0
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 7.0e-105 384.4 267 69.7
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 7.0e-105 384.4 262 70.2
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 1.6e-104 383.3 270 66.7
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 3.5e-104 382.1 259 69.1
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 4.6e-104 381.7 268 68.7
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 1.0e-103 380.6 270 68.1
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 1.0e-103 380.6 267 70.8
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 5.0e-103 378.3 260 68.5
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 8.6e-103 377.5 259 70.3
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.9e-102 376.3 267 66.7
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.9e-102 376.3 259 70.3
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 2.5e-102 375.9 259 69.9
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.3e-102 375.2 258 70.2
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 5.6e-102 374.8 272 67.6
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 4.0e-100 368.6 268 66.8
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 6.8e-100 367.9 271 67.5
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 7.5e-99 364.4 260 66.9
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 1.3e-98 363.6 220 78.6
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 1.3e-98 363.6 226 76.1
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 1.7e-98 363.2 267 63.7
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 2.2e-98 362.8 268 64.6
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 1.2e-96 357.1 268 64.2
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.7e-95 353.2 251 68.5
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 5.1e-95 351.7 269 63.2
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 4.7e-93 345.1 268 65.3
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 4.4e-91 338.6 231 68.4
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 6.4e-90 334.7 260 63.1
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 1.9e-89 333.2 267 60.7
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 6.6e-87 324.7 267 59.9
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 1.1e-84 317.4 268 59.7
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 5.4e-81 305.1 226 62.4
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 3.9e-79 298.9 230 63.5
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 4.3e-78 295.4 230 62.6
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 1.1e-73 280.8 184 75.0
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 9.0e-68 261.2 185 67.6
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 4.2e-65 252.3 177 67.8
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 4.2e-65 252.3 177 67.8
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.3e-55 220.7 121 81.0
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 6.7e-55 218.4 138 74.6
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 6.3e-53 211.8 185 54.6
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 3.1e-52 209.5 201 52.7
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 5.3e-52 208.8 288 43.8
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 2.5e-49 199.9 184 53.3
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 5.5e-49 198.7 167 57.5
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 7.9e-48 194.9 137 72.3
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 1.4e-41 174.1 153 54.9
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 3.4e-35 152.9 100 69.0
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.5e-35 152.5 123 62.6
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 5.5e-33 145.6 111 64.0
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 1.6e-32 144.1 320 31.9
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.7e-32 142.5 320 31.9
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 3.7e-29 132.9 103 64.1
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 4.5e-19 99.4 76 63.2
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 2.2e-18 97.1 98 50.0
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 9.4e-17 91.7 54 72.2
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.1e-16 90.5 54 70.4
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 4.1e-12 76.3 119 40.3


User provided reference genes

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