Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 1.7e-217 759.2 422 100.0
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 1.0e-129 467.6 423 66.2
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 2.7e-127 459.5 434 65.0
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 4.1e-123 445.7 424 64.9
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 2.3e-118 429.9 436 61.2
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 5.5e-112 408.7 437 61.1
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 5.5e-112 408.7 436 61.0
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 2.2e-108 396.7 433 57.5
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 4.8e-108 395.6 430 58.1
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 6.3e-108 395.2 424 59.2
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.2e-106 391.0 436 52.8
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 1.6e-106 390.6 380 58.9
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 4.5e-106 389.0 350 65.4
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 7.7e-106 388.3 453 51.4
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 7.7e-106 388.3 429 52.7
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 1.9e-104 383.6 434 53.5
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 2.5e-104 383.3 426 52.3
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 2.5e-104 383.3 441 55.1
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 7.2e-104 381.7 432 56.7
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 4.7e-103 379.0 445 56.6
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 6.1e-103 378.6 436 51.8
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.0e-102 376.3 436 51.1
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 8.8e-102 374.8 436 52.1
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 7.5e-101 371.7 433 56.8
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 1.7e-100 370.5 434 51.6
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 1.1e-99 367.9 377 55.4
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 4.1e-99 365.9 440 55.5
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 5.3e-99 365.5 399 53.4
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 1.6e-98 364.0 412 51.5
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 3.5e-98 362.8 455 50.1
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 5.0e-97 359.0 389 59.4
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 6.5e-97 358.6 412 52.9
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 6.5e-97 358.6 376 60.6
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 5.5e-96 355.5 428 49.3
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 1.6e-95 354.0 425 49.6
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 2.7e-95 353.2 425 49.4
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 3.6e-95 352.8 376 60.4
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 4.7e-95 352.4 380 61.3
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 3.0e-94 349.7 428 49.5
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 4.0e-94 349.4 451 53.0
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 5.2e-94 349.0 451 52.5
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 3.4e-93 346.3 428 49.5
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 5.7e-93 345.5 252 69.4
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 4.1e-91 339.3 425 54.4
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 7.0e-91 338.6 431 55.0
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 4.5e-90 335.9 434 48.8
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 7.7e-90 335.1 446 48.2
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 2.3e-89 333.6 448 48.2
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 6.6e-89 332.0 372 52.2
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 1.5e-88 330.9 419 53.7
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 1.9e-88 330.5 445 47.9
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 4.4e-85 319.3 299 58.2
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 2.0e-82 310.5 468 48.7
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 1.0e-81 308.1 281 58.7
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 1.5e-80 304.3 444 46.8
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 2.2e-76 290.4 426 45.3
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 5.8e-69 265.8 273 53.1
Peaxi162Scf00089g01230 Petunia axillaris HOM05D007670 ORTHO05D009646 1.3e-68 264.6 240 60.4
Solyc03g112120.3 Solanum lycopersicum HOM05D007670 ORTHO05D009646 1.1e-64 251.5 238 59.2
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 1.2e-63 248.1 354 49.7
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 8.9e-62 241.9 387 42.1
Actinidia24601 Actinidia chinensis HOM05D007670 ORTHO05D009646 2.9e-60 236.9 240 55.0
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 5.2e-54 216.1 335 41.2
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 2.6e-53 213.8 265 60.4
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 3.4e-53 213.4 227 50.7
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 1.9e-51 207.6 272 43.8
Glyma.17G124700 Glycine max HOM05D007670 ORTHO05D009646 4.2e-51 206.5 177 61.6
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 1.8e-38 164.5 258 42.6
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 9.9e-37 158.7 239 41.8
Zm00001eb143920 Zea mays HOM05D007670 ORTHO05D009646 2.9e-36 157.1 187 46.0
Os01g0909300 Oryza sativa ssp. japonica HOM05D007670 ORTHO05D009646 1.1e-35 155.2 162 49.4
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 1.4e-35 154.8 111 70.3
Zm00001eb393770 Zea mays HOM05D007670 ORTHO05D009646 5.1e-33 146.4 180 44.4
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.0e-30 136.7 239 34.3
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.0e-30 136.7 232 33.2
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.0e-30 136.7 232 33.2
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.3e-28 131.7 250 35.2
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.5e-26 123.6 228 35.1
Peaxi162Scf00089g01229 Petunia axillaris HOM05D007670 ORTHO05D009646 1.9e-24 117.9 197 50.8
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 3.7e-23 113.6 188 40.4
Solyc03g112110.1 Solanum lycopersicum HOM05D007670 ORTHO05D009646 5.3e-22 109.8 188 47.9
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 8.4e-20 102.4 278 31.3
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 1.1e-16 92.0 103 51.5
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 4.3e-16 90.1 225 31.1
Sabra15G0107400 Salix brachista HOM05D007670 ORTHO05D009646 4.1e-14 83.6 301 38.2
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 6.5e-12 76.3 232 27.2
MELO3C031542.2 Cucumis melo HOM05D007670 ORTHO05D009646 1.9e-11 74.7 98 48.0
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 2.5e-11 74.3 232 26.7
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 5.5e-11 73.2 232 26.7
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 9.4e-11 72.4 246 26.0
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 9.4e-11 72.4 239 26.4
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 9.4e-11 72.4 239 26.4
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 2.1e-10 71.2 221 27.6
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 2.7e-10 70.9 261 25.7
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 4.6e-10 70.1 260 26.2
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 6.1e-10 69.7 206 27.2
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 6.1e-10 69.7 271 25.5
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 6.1e-10 69.7 220 27.7
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 7.9e-10 69.3 249 26.5
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 1.8e-09 68.2 239 25.1
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 3.0e-09 67.4 205 26.3
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 3.0e-09 67.4 232 25.0
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 3.9e-09 67.0 258 24.8
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 3.9e-09 67.0 220 26.8
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 5.1e-09 66.6 232 25.0
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 6.7e-09 66.2 268 25.0
Aqoxy3G00774 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 8.8e-09 65.9 147 32.7
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 8.8e-09 65.9 206 28.2
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 1.1e-08 65.5 220 24.5
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 2.0e-08 64.7 262 24.4
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 2.5e-08 64.3 233 24.9
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 2.5e-08 64.3 188 28.7
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 2.5e-08 64.3 238 26.5
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 3.3e-08 63.9 268 24.3
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 3.3e-08 63.9 269 23.8
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 1.3e-07 62.0 266 25.2
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 1.3e-07 62.0 267 26.2
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 1.3e-07 62.0 267 26.2
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 1.7e-07 61.6 212 25.9
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 1.7e-07 61.6 220 23.6
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 1.7e-07 61.6 239 24.3
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 2.2e-07 61.2 188 27.1
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 2.8e-07 60.8 302 24.8
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 2.8e-07 60.8 269 23.8
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 2.8e-07 60.8 254 25.2
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 3.7e-07 60.5 221 22.6
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 4.8e-07 60.1 232 27.2
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 4.8e-07 60.1 254 23.2
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 4.8e-07 60.1 221 22.6
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 6.3e-07 59.7 272 23.5
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 1.8e-06 58.2 254 24.4
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 1.8e-06 58.2 254 24.0
TAR626G0822 Trochodendron aralioides HOM05D007837 ORTHO05D009965 2.4e-06 57.8 268 24.6
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 4.1e-06 57.0 258 22.5
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 4.1e-06 57.0 199 24.1
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 5.3e-06 56.6 221 23.5
QL05p065337 Quercus lobata HOM05D007837 ORTHO05D009965 9.1e-06 55.8 200 26.5


User provided reference genes

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